EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000017386 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 45956 bases
Position: chrAVPZ01000067.1:3014582-3060537
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000017810	RRM_1	PF00076.22	5.6e-33	1	3
ENSCAPP00000017810	RRM_1	PF00076.22	5.6e-33	2	3
ENSCAPP00000017810	RRM_1	PF00076.22	5.6e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021619	A1CF-201	1362	-	ENSCAPP00000017810	453 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000017386	A1CF	61	57.878	ENSCAPG00000011841	-	83	57.878
ENSCAPG00000017386	A1CF	84	46.882	ENSCAPG00000011928	-	96	46.452
ENSCAPG00000017386	A1CF	53	70.833	ENSCAPG00000008426	RBM47	69	48.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017386	A1CF	89	95.868	ENSG00000148584	A1CF	100	82.822	Homo_sapiens
ENSCAPG00000017386	A1CF	100	73.469	ENSAPOG00000008259	a1cf	100	73.761	Acanthochromis_polyacanthus
ENSCAPG00000017386	A1CF	100	81.288	ENSAMEG00000000523	A1CF	100	81.288	Ailuropoda_melanoleuca
ENSCAPG00000017386	A1CF	100	76.358	ENSACIG00000008632	a1cf	100	74.344	Amphilophus_citrinellus
ENSCAPG00000017386	A1CF	100	73.761	ENSAOCG00000023744	a1cf	100	74.344	Amphiprion_ocellaris
ENSCAPG00000017386	A1CF	100	73.469	ENSAPEG00000009537	a1cf	100	74.052	Amphiprion_percula
ENSCAPG00000017386	A1CF	100	75.399	ENSATEG00000013720	a1cf	100	73.469	Anabas_testudineus
ENSCAPG00000017386	A1CF	100	79.448	ENSAPLG00000002964	A1CF	100	79.755	Anas_platyrhynchos
ENSCAPG00000017386	A1CF	100	75.962	ENSACAG00000015269	A1CF	100	75.926	Anolis_carolinensis
ENSCAPG00000017386	A1CF	90	95.142	ENSANAG00000019974	A1CF	100	83.436	Aotus_nancymaae
ENSCAPG00000017386	A1CF	95	75.399	ENSACLG00000017428	a1cf	100	73.178	Astatotilapia_calliptera
ENSCAPG00000017386	A1CF	100	79.868	ENSAMXG00000018180	a1cf	100	79.868	Astyanax_mexicanus
ENSCAPG00000017386	A1CF	100	82.515	ENSBTAG00000021195	A1CF	100	82.515	Bos_taurus
ENSCAPG00000017386	A1CF	100	83.436	ENSCJAG00000005045	A1CF	100	83.436	Callithrix_jacchus
ENSCAPG00000017386	A1CF	100	81.288	ENSCAFG00000015581	A1CF	100	81.288	Canis_familiaris
ENSCAPG00000017386	A1CF	90	93.061	ENSCAFG00020026421	A1CF	100	81.288	Canis_lupus_dingo
ENSCAPG00000017386	A1CF	100	82.515	ENSCHIG00000020411	A1CF	100	82.515	Capra_hircus
ENSCAPG00000017386	A1CF	90	94.737	ENSTSYG00000001755	A1CF	92	94.737	Carlito_syrichta
ENSCAPG00000017386	A1CF	100	83.742	ENSCPOG00000009807	A1CF	100	83.742	Cavia_porcellus
ENSCAPG00000017386	A1CF	90	95.142	ENSCCAG00000018168	A1CF	100	83.436	Cebus_capucinus
ENSCAPG00000017386	A1CF	90	94.737	ENSCATG00000043715	A1CF	100	83.129	Cercocebus_atys
ENSCAPG00000017386	A1CF	100	83.333	ENSCLAG00000010424	A1CF	100	83.333	Chinchilla_lanigera
ENSCAPG00000017386	A1CF	100	83.436	ENSCSAG00000007032	A1CF	100	83.436	Chlorocebus_sabaeus
ENSCAPG00000017386	A1CF	90	94.332	ENSCHOG00000009089	A1CF	86	94.332	Choloepus_hoffmanni
ENSCAPG00000017386	A1CF	100	79.012	ENSCPBG00000026464	A1CF	100	79.321	Chrysemys_picta_bellii
ENSCAPG00000017386	A1CF	90	95.142	ENSCANG00000038032	A1CF	100	83.436	Colobus_angolensis_palliatus
ENSCAPG00000017386	A1CF	100	83.544	ENSCGRG00001017413	A1cf	100	83.544	Cricetulus_griseus_chok1gshd
ENSCAPG00000017386	A1CF	100	83.544	ENSCGRG00000017332	A1cf	100	83.544	Cricetulus_griseus_crigri
ENSCAPG00000017386	A1CF	100	72.524	ENSCSEG00000002361	a1cf	100	73.538	Cynoglossus_semilaevis
ENSCAPG00000017386	A1CF	100	75.719	ENSCVAG00000010520	a1cf	100	73.761	Cyprinodon_variegatus
ENSCAPG00000017386	A1CF	100	58.615	ENSDARG00000002968	a1cf	100	75.926	Danio_rerio
ENSCAPG00000017386	A1CF	100	81.288	ENSDNOG00000002829	A1CF	100	81.288	Dasypus_novemcinctus
ENSCAPG00000017386	A1CF	83	95.238	ENSETEG00000012527	A1CF	69	95.238	Echinops_telfairi
ENSCAPG00000017386	A1CF	90	94.737	ENSEASG00005012924	A1CF	89	94.737	Equus_asinus_asinus
ENSCAPG00000017386	A1CF	100	82.515	ENSECAG00000010424	A1CF	100	82.515	Equus_caballus
ENSCAPG00000017386	A1CF	79	80.567	ENSEEUG00000000013	A1CF	85	81.818	Erinaceus_europaeus
ENSCAPG00000017386	A1CF	100	74.679	ENSELUG00000003159	a1cf	100	74.691	Esox_lucius
ENSCAPG00000017386	A1CF	90	91.903	ENSFCAG00000011179	A1CF	85	93.388	Felis_catus
ENSCAPG00000017386	A1CF	100	63.481	ENSFALG00000013183	A1CF	100	62.969	Ficedula_albicollis
ENSCAPG00000017386	A1CF	100	83.129	ENSFDAG00000019371	A1CF	100	83.129	Fukomys_damarensis
ENSCAPG00000017386	A1CF	100	81.293	ENSFHEG00000019652	a1cf	100	78.395	Fundulus_heteroclitus
ENSCAPG00000017386	A1CF	98	74.295	ENSGMOG00000018943	a1cf	86	74.295	Gadus_morhua
ENSCAPG00000017386	A1CF	90	92.245	ENSGALG00000003765	A1CF	88	92.245	Gallus_gallus
ENSCAPG00000017386	A1CF	100	75.080	ENSGAFG00000014868	a1cf	100	73.178	Gambusia_affinis
ENSCAPG00000017386	A1CF	100	74.320	ENSGACG00000010241	a1cf	100	74.320	Gasterosteus_aculeatus
ENSCAPG00000017386	A1CF	90	91.020	ENSGAGG00000016508	A1CF	88	92.500	Gopherus_agassizii
ENSCAPG00000017386	A1CF	89	95.868	ENSGGOG00000009670	A1CF	100	82.822	Gorilla_gorilla
ENSCAPG00000017386	A1CF	95	76.038	ENSHBUG00000021959	a1cf	100	73.761	Haplochromis_burtoni
ENSCAPG00000017386	A1CF	100	82.515	ENSHGLG00000008955	A1CF	100	82.515	Heterocephalus_glaber_female
ENSCAPG00000017386	A1CF	100	81.288	ENSHGLG00100000518	A1CF	100	81.288	Heterocephalus_glaber_male
ENSCAPG00000017386	A1CF	90	72.843	ENSHCOG00000017669	a1cf	100	73.231	Hippocampus_comes
ENSCAPG00000017386	A1CF	86	75.000	ENSIPUG00000010367	a1cf	95	75.309	Ictalurus_punctatus
ENSCAPG00000017386	A1CF	100	73.469	ENSKMAG00000006568	a1cf	100	73.761	Kryptolebias_marmoratus
ENSCAPG00000017386	A1CF	98	76.038	ENSLBEG00000020994	a1cf	98	74.344	Labrus_bergylta
ENSCAPG00000017386	A1CF	100	76.543	ENSLACG00000008061	A1CF	100	76.852	Latimeria_chalumnae
ENSCAPG00000017386	A1CF	100	74.706	ENSLOCG00000006302	a1cf	100	74.706	Lepisosteus_oculatus
ENSCAPG00000017386	A1CF	100	82.407	ENSLAFG00000015462	A1CF	100	82.407	Loxodonta_africana
ENSCAPG00000017386	A1CF	90	95.142	ENSMFAG00000035948	A1CF	100	83.436	Macaca_fascicularis
ENSCAPG00000017386	A1CF	90	95.142	ENSMMUG00000007077	A1CF	100	83.436	Macaca_mulatta
ENSCAPG00000017386	A1CF	90	94.737	ENSMNEG00000031454	A1CF	100	83.129	Macaca_nemestrina
ENSCAPG00000017386	A1CF	90	94.737	ENSMLEG00000037223	A1CF	100	83.129	Mandrillus_leucophaeus
ENSCAPG00000017386	A1CF	100	54.892	ENSMAMG00000010402	a1cf	100	72.012	Mastacembelus_armatus
ENSCAPG00000017386	A1CF	100	75.399	ENSMZEG00005013245	a1cf	100	73.178	Maylandia_zebra
ENSCAPG00000017386	A1CF	100	79.077	ENSMGAG00000001507	A1CF	100	78.899	Meleagris_gallopavo
ENSCAPG00000017386	A1CF	100	83.228	ENSMAUG00000007422	A1cf	100	83.228	Mesocricetus_auratus
ENSCAPG00000017386	A1CF	90	95.510	ENSMICG00000003377	A1CF	100	83.642	Microcebus_murinus
ENSCAPG00000017386	A1CF	100	82.353	ENSMOCG00000021536	A1cf	100	82.353	Microtus_ochrogaster
ENSCAPG00000017386	A1CF	100	78.073	ENSMMOG00000009422	a1cf	100	76.133	Mola_mola
ENSCAPG00000017386	A1CF	85	81.410	ENSMODG00000016478	A1CF	99	80.864	Monodelphis_domestica
ENSCAPG00000017386	A1CF	100	72.595	ENSMALG00000012992	a1cf	100	72.886	Monopterus_albus
ENSCAPG00000017386	A1CF	100	82.353	MGP_CAROLIEiJ_G0022873	A1cf	100	82.353	Mus_caroli
ENSCAPG00000017386	A1CF	100	82.353	ENSMUSG00000052595	A1cf	100	82.353	Mus_musculus
ENSCAPG00000017386	A1CF	100	81.734	MGP_PahariEiJ_G0014366	A1cf	100	81.734	Mus_pahari
ENSCAPG00000017386	A1CF	100	82.353	MGP_SPRETEiJ_G0023792	A1cf	100	82.353	Mus_spretus
ENSCAPG00000017386	A1CF	100	72.699	ENSMPUG00000016971	A1CF	100	72.699	Mustela_putorius_furo
ENSCAPG00000017386	A1CF	100	81.902	ENSMLUG00000016071	A1CF	100	81.902	Myotis_lucifugus
ENSCAPG00000017386	A1CF	100	82.663	ENSNGAG00000015136	A1cf	100	82.663	Nannospalax_galili
ENSCAPG00000017386	A1CF	95	76.038	ENSNBRG00000001712	a1cf	100	73.761	Neolamprologus_brichardi
ENSCAPG00000017386	A1CF	89	96.694	ENSNLEG00000012028	A1CF	88	96.694	Nomascus_leucogenys
ENSCAPG00000017386	A1CF	90	92.276	ENSMEUG00000015909	A1CF	92	92.276	Notamacropus_eugenii
ENSCAPG00000017386	A1CF	85	64.417	ENSOPRG00000010667	A1CF	100	64.417	Ochotona_princeps
ENSCAPG00000017386	A1CF	100	76.038	ENSONIG00000019105	a1cf	100	73.761	Oreochromis_niloticus
ENSCAPG00000017386	A1CF	75	80.675	ENSOANG00000007360	A1CF	96	80.675	Ornithorhynchus_anatinus
ENSCAPG00000017386	A1CF	100	81.595	ENSOCUG00000011587	A1CF	100	81.595	Oryctolagus_cuniculus
ENSCAPG00000017386	A1CF	100	71.720	ENSORLG00000013342	a1cf	100	72.012	Oryzias_latipes
ENSCAPG00000017386	A1CF	100	72.012	ENSORLG00020000586	a1cf	100	72.303	Oryzias_latipes_hni
ENSCAPG00000017386	A1CF	100	72.012	ENSORLG00015018569	a1cf	100	72.303	Oryzias_latipes_hsok
ENSCAPG00000017386	A1CF	100	72.303	ENSOMEG00000013531	a1cf	100	72.595	Oryzias_melastigma
ENSCAPG00000017386	A1CF	100	82.716	ENSOGAG00000012884	A1CF	100	82.716	Otolemur_garnettii
ENSCAPG00000017386	A1CF	100	82.515	ENSOARG00000013695	A1CF	100	82.515	Ovis_aries
ENSCAPG00000017386	A1CF	89	95.868	ENSPPAG00000028115	A1CF	85	95.868	Pan_paniscus
ENSCAPG00000017386	A1CF	90	92.308	ENSPPRG00000012180	A1CF	100	81.288	Panthera_pardus
ENSCAPG00000017386	A1CF	90	92.308	ENSPTIG00000021223	A1CF	100	81.288	Panthera_tigris_altaica
ENSCAPG00000017386	A1CF	89	95.868	ENSPTRG00000002508	A1CF	88	95.868	Pan_troglodytes
ENSCAPG00000017386	A1CF	90	95.142	ENSPANG00000021988	A1CF	100	83.436	Papio_anubis
ENSCAPG00000017386	A1CF	100	76.161	ENSPKIG00000025176	a1cf	100	76.161	Paramormyrops_kingsleyae
ENSCAPG00000017386	A1CF	100	79.012	ENSPSIG00000010318	A1CF	100	79.630	Pelodiscus_sinensis
ENSCAPG00000017386	A1CF	85	52.964	ENSPMGG00000013359	a1cf	99	51.590	Periophthalmus_magnuspinnatus
ENSCAPG00000017386	A1CF	100	82.972	ENSPEMG00000015021	A1cf	100	82.972	Peromyscus_maniculatus_bairdii
ENSCAPG00000017386	A1CF	100	80.128	ENSPCIG00000002175	A1CF	100	79.630	Phascolarctos_cinereus
ENSCAPG00000017386	A1CF	100	75.080	ENSPFOG00000007437	-	100	73.178	Poecilia_formosa
ENSCAPG00000017386	A1CF	100	75.080	ENSPFOG00000006683	a1cf	100	73.178	Poecilia_formosa
ENSCAPG00000017386	A1CF	100	75.080	ENSPLAG00000000026	a1cf	100	73.178	Poecilia_latipinna
ENSCAPG00000017386	A1CF	100	75.080	ENSPLAG00000001210	-	100	73.178	Poecilia_latipinna
ENSCAPG00000017386	A1CF	83	71.705	ENSPMEG00000015529	-	100	53.108	Poecilia_mexicana
ENSCAPG00000017386	A1CF	100	52.603	ENSPMEG00000000921	a1cf	100	52.585	Poecilia_mexicana
ENSCAPG00000017386	A1CF	100	74.441	ENSPREG00000016298	a1cf	100	72.595	Poecilia_reticulata
ENSCAPG00000017386	A1CF	100	83.129	ENSPPYG00000002819	A1CF	100	83.129	Pongo_abelii
ENSCAPG00000017386	A1CF	67	92.982	ENSPCAG00000006463	A1CF	52	92.982	Procavia_capensis
ENSCAPG00000017386	A1CF	100	83.642	ENSPCOG00000024172	A1CF	100	83.642	Propithecus_coquereli
ENSCAPG00000017386	A1CF	100	76.038	ENSPNYG00000017944	a1cf	100	73.761	Pundamilia_nyererei
ENSCAPG00000017386	A1CF	100	75.617	ENSPNAG00000007704	a1cf	100	75.926	Pygocentrus_nattereri
ENSCAPG00000017386	A1CF	100	82.972	ENSRNOG00000033195	A1cf	100	82.972	Rattus_norvegicus
ENSCAPG00000017386	A1CF	100	88.926	ENSRBIG00000042892	A1CF	100	94.215	Rhinopithecus_bieti
ENSCAPG00000017386	A1CF	89	96.694	ENSRROG00000041398	A1CF	90	96.694	Rhinopithecus_roxellana
ENSCAPG00000017386	A1CF	89	96.694	ENSSBOG00000021930	A1CF	100	96.694	Saimiri_boliviensis_boliviensis
ENSCAPG00000017386	A1CF	100	80.864	ENSSHAG00000005096	A1CF	100	80.864	Sarcophilus_harrisii
ENSCAPG00000017386	A1CF	100	75.617	ENSSFOG00015011774	a1cf	89	75.926	Scleropages_formosus
ENSCAPG00000017386	A1CF	100	72.404	ENSSMAG00000013271	a1cf	100	72.700	Scophthalmus_maximus
ENSCAPG00000017386	A1CF	100	74.441	ENSSDUG00000013930	a1cf	100	72.886	Seriola_dumerili
ENSCAPG00000017386	A1CF	83	74.441	ENSSLDG00000004290	a1cf	76	72.886	Seriola_lalandi_dorsalis
ENSCAPG00000017386	A1CF	90	72.653	ENSSARG00000005940	A1CF	87	72.653	Sorex_araneus
ENSCAPG00000017386	A1CF	90	90.283	ENSSPUG00000006797	A1CF	85	91.736	Sphenodon_punctatus
ENSCAPG00000017386	A1CF	100	82.822	ENSSSCG00000010431	A1CF	100	82.822	Sus_scrofa
ENSCAPG00000017386	A1CF	100	79.567	ENSTGUG00000005090	A1CF	100	79.876	Taeniopygia_guttata
ENSCAPG00000017386	A1CF	100	73.163	ENSTRUG00000001982	a1cf	100	73.231	Takifugu_rubripes
ENSCAPG00000017386	A1CF	100	73.651	ENSTNIG00000003580	a1cf	100	73.700	Tetraodon_nigroviridis
ENSCAPG00000017386	A1CF	90	83.806	ENSTTRG00000013190	A1CF	85	85.124	Tursiops_truncatus
ENSCAPG00000017386	A1CF	100	81.288	ENSUAMG00000020065	A1CF	100	81.288	Ursus_americanus
ENSCAPG00000017386	A1CF	90	91.903	ENSUMAG00000011162	A1CF	100	80.982	Ursus_maritimus
ENSCAPG00000017386	A1CF	89	95.455	ENSVPAG00000006130	A1CF	85	95.455	Vicugna_pacos
ENSCAPG00000017386	A1CF	100	81.288	ENSVVUG00000002504	A1CF	100	81.288	Vulpes_vulpes
ENSCAPG00000017386	A1CF	100	66.975	ENSXETG00000006611	a1cf	87	67.593	Xenopus_tropicalis
ENSCAPG00000017386	A1CF	100	75.080	ENSXCOG00000003302	a1cf	100	73.178	Xiphophorus_couchianus
ENSCAPG00000017386	A1CF	100	75.080	ENSXMAG00000016703	a1cf	100	73.178	Xiphophorus_maculatus