EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000017559 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 2419 bases
Position: chrAVPZ01000866.1:867553-869971
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000018062	PseudoU_synth_2	PF00849.22	1.2e-18	1	1
ENSCAPP00000018064	PseudoU_synth_2	PF00849.22	1.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021873	RPUSD3-202	639	-	ENSCAPP00000018064	213 (aa)	-	-
ENSCAPT00000021871	RPUSD3-201	792	-	ENSCAPP00000018062	264 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017559	RPUSD3	98	80.769	ENSG00000156990	RPUSD3	82	79.661	Homo_sapiens
ENSCAPG00000017559	RPUSD3	99	78.327	ENSAMEG00000016227	RPUSD3	75	78.327	Ailuropoda_melanoleuca
ENSCAPG00000017559	RPUSD3	98	55.769	ENSACAG00000009836	RPUSD3	75	55.303	Anolis_carolinensis
ENSCAPG00000017559	RPUSD3	75	71.951	ENSANAG00000019945	-	63	79.618	Aotus_nancymaae
ENSCAPG00000017559	RPUSD3	78	69.767	ENSANAG00000038118	-	75	78.846	Aotus_nancymaae
ENSCAPG00000017559	RPUSD3	70	63.354	ENSANAG00000007127	-	73	55.629	Aotus_nancymaae
ENSCAPG00000017559	RPUSD3	99	79.848	ENSBTAG00000007968	RPUSD3	76	79.848	Bos_taurus
ENSCAPG00000017559	RPUSD3	99	79.087	ENSCAFG00000029733	RPUSD3	75	79.087	Canis_familiaris
ENSCAPG00000017559	RPUSD3	99	79.087	ENSCAFG00020008582	RPUSD3	80	79.087	Canis_lupus_dingo
ENSCAPG00000017559	RPUSD3	99	79.848	ENSCHIG00000026027	RPUSD3	79	79.848	Capra_hircus
ENSCAPG00000017559	RPUSD3	94	80.723	ENSTSYG00000009994	RPUSD3	74	79.920	Carlito_syrichta
ENSCAPG00000017559	RPUSD3	100	99.621	ENSCPOG00000037956	RPUSD3	74	99.621	Cavia_porcellus
ENSCAPG00000017559	RPUSD3	99	80.228	ENSCCAG00000029530	RPUSD3	76	80.228	Cebus_capucinus
ENSCAPG00000017559	RPUSD3	98	82.308	ENSCATG00000036939	RPUSD3	74	82.308	Cercocebus_atys
ENSCAPG00000017559	RPUSD3	98	81.923	ENSCSAG00000010506	RPUSD3	74	81.923	Chlorocebus_sabaeus
ENSCAPG00000017559	RPUSD3	66	75.893	ENSCHOG00000010151	-	66	75.893	Choloepus_hoffmanni
ENSCAPG00000017559	RPUSD3	87	57.672	ENSCPBG00000008825	RPUSD3	97	53.257	Chrysemys_picta_bellii
ENSCAPG00000017559	RPUSD3	98	83.077	ENSCANG00000040711	RPUSD3	74	83.077	Colobus_angolensis_palliatus
ENSCAPG00000017559	RPUSD3	98	75.000	ENSCGRG00001004923	Rpusd3	73	74.144	Cricetulus_griseus_chok1gshd
ENSCAPG00000017559	RPUSD3	98	75.000	ENSCGRG00000018315	Rpusd3	76	75.000	Cricetulus_griseus_crigri
ENSCAPG00000017559	RPUSD3	99	75.191	ENSDNOG00000039160	RPUSD3	69	75.191	Dasypus_novemcinctus
ENSCAPG00000017559	RPUSD3	98	73.208	ENSDORG00000026827	Rpusd3	92	73.208	Dipodomys_ordii
ENSCAPG00000017559	RPUSD3	99	75.665	ENSETEG00000006538	RPUSD3	75	75.665	Echinops_telfairi
ENSCAPG00000017559	RPUSD3	82	37.017	ENSEBUG00000015605	RPUSD3	61	39.362	Eptatretus_burgeri
ENSCAPG00000017559	RPUSD3	99	80.608	ENSEASG00005014160	RPUSD3	73	80.608	Equus_asinus_asinus
ENSCAPG00000017559	RPUSD3	99	81.749	ENSECAG00000019988	RPUSD3	73	81.749	Equus_caballus
ENSCAPG00000017559	RPUSD3	80	73.113	ENSEEUG00000007353	RPUSD3	60	73.113	Erinaceus_europaeus
ENSCAPG00000017559	RPUSD3	99	80.228	ENSFCAG00000014199	RPUSD3	75	80.228	Felis_catus
ENSCAPG00000017559	RPUSD3	98	48.846	ENSFALG00000012968	RPUSD3	94	48.846	Ficedula_albicollis
ENSCAPG00000017559	RPUSD3	99	88.973	ENSFDAG00000008350	RPUSD3	81	88.973	Fukomys_damarensis
ENSCAPG00000017559	RPUSD3	95	54.854	ENSGAGG00000007493	RPUSD3	82	55.556	Gopherus_agassizii
ENSCAPG00000017559	RPUSD3	98	80.769	ENSGGOG00000013120	RPUSD3	73	81.818	Gorilla_gorilla
ENSCAPG00000017559	RPUSD3	99	90.114	ENSHGLG00000011722	RPUSD3	68	90.114	Heterocephalus_glaber_female
ENSCAPG00000017559	RPUSD3	99	90.114	ENSHGLG00100016038	RPUSD3	68	90.114	Heterocephalus_glaber_male
ENSCAPG00000017559	RPUSD3	99	79.468	ENSSTOG00000002125	RPUSD3	75	79.468	Ictidomys_tridecemlineatus
ENSCAPG00000017559	RPUSD3	99	73.004	ENSJJAG00000012679	Rpusd3	76	73.004	Jaculus_jaculus
ENSCAPG00000017559	RPUSD3	99	76.806	ENSLAFG00000017501	RPUSD3	76	76.806	Loxodonta_africana
ENSCAPG00000017559	RPUSD3	98	81.538	ENSMFAG00000032407	RPUSD3	74	81.538	Macaca_fascicularis
ENSCAPG00000017559	RPUSD3	98	81.923	ENSMMUG00000010628	RPUSD3	81	81.923	Macaca_mulatta
ENSCAPG00000017559	RPUSD3	98	81.538	ENSMNEG00000040308	RPUSD3	74	81.538	Macaca_nemestrina
ENSCAPG00000017559	RPUSD3	98	82.308	ENSMLEG00000033940	RPUSD3	74	82.308	Mandrillus_leucophaeus
ENSCAPG00000017559	RPUSD3	99	74.525	ENSMAUG00000015473	Rpusd3	76	74.525	Mesocricetus_auratus
ENSCAPG00000017559	RPUSD3	99	81.369	ENSMICG00000002315	RPUSD3	76	81.369	Microcebus_murinus
ENSCAPG00000017559	RPUSD3	99	73.764	ENSMOCG00000022613	Rpusd3	76	73.764	Microtus_ochrogaster
ENSCAPG00000017559	RPUSD3	98	62.692	ENSMODG00000005210	RPUSD3	68	62.692	Monodelphis_domestica
ENSCAPG00000017559	RPUSD3	99	75.285	MGP_CAROLIEiJ_G0028725	Rpusd3	74	77.889	Mus_caroli
ENSCAPG00000017559	RPUSD3	99	74.525	ENSMUSG00000051169	Rpusd3	74	77.889	Mus_musculus
ENSCAPG00000017559	RPUSD3	99	74.905	MGP_PahariEiJ_G0022476	Rpusd3	74	77.889	Mus_pahari
ENSCAPG00000017559	RPUSD3	99	74.144	MGP_SPRETEiJ_G0029753	Rpusd3	74	76.884	Mus_spretus
ENSCAPG00000017559	RPUSD3	99	79.848	ENSMPUG00000017132	RPUSD3	75	79.848	Mustela_putorius_furo
ENSCAPG00000017559	RPUSD3	99	83.270	ENSMLUG00000006135	RPUSD3	76	83.270	Myotis_lucifugus
ENSCAPG00000017559	RPUSD3	98	76.923	ENSNGAG00000023704	Rpusd3	78	76.923	Nannospalax_galili
ENSCAPG00000017559	RPUSD3	98	65.000	ENSNLEG00000004214	RPUSD3	73	82.468	Nomascus_leucogenys
ENSCAPG00000017559	RPUSD3	98	65.517	ENSMEUG00000013098	-	100	65.517	Notamacropus_eugenii
ENSCAPG00000017559	RPUSD3	100	62.500	ENSOPRG00000002300	RPUSD3	75	62.500	Ochotona_princeps
ENSCAPG00000017559	RPUSD3	99	87.072	ENSODEG00000018137	RPUSD3	91	87.072	Octodon_degus
ENSCAPG00000017559	RPUSD3	98	48.649	ENSOANG00000012081	-	90	48.649	Ornithorhynchus_anatinus
ENSCAPG00000017559	RPUSD3	99	66.543	ENSOCUG00000027885	RPUSD3	78	66.543	Oryctolagus_cuniculus
ENSCAPG00000017559	RPUSD3	99	79.848	ENSOGAG00000012592	RPUSD3	84	79.848	Otolemur_garnettii
ENSCAPG00000017559	RPUSD3	98	80.769	ENSOARG00000005928	RPUSD3	75	80.228	Ovis_aries
ENSCAPG00000017559	RPUSD3	99	80.228	ENSPPAG00000038083	RPUSD3	75	80.228	Pan_paniscus
ENSCAPG00000017559	RPUSD3	99	79.848	ENSPPRG00000024433	RPUSD3	75	79.848	Panthera_pardus
ENSCAPG00000017559	RPUSD3	99	80.989	ENSPTIG00000006828	RPUSD3	76	80.989	Panthera_tigris_altaica
ENSCAPG00000017559	RPUSD3	99	80.228	ENSPTRG00000051760	RPUSD3	75	80.228	Pan_troglodytes
ENSCAPG00000017559	RPUSD3	98	82.308	ENSPANG00000023885	RPUSD3	74	82.308	Papio_anubis
ENSCAPG00000017559	RPUSD3	99	74.525	ENSPEMG00000017245	Rpusd3	76	74.525	Peromyscus_maniculatus_bairdii
ENSCAPG00000017559	RPUSD3	98	65.385	ENSPCIG00000021901	RPUSD3	76	65.385	Phascolarctos_cinereus
ENSCAPG00000017559	RPUSD3	99	80.608	ENSPPYG00000013676	RPUSD3	75	80.608	Pongo_abelii
ENSCAPG00000017559	RPUSD3	70	76.974	ENSPCAG00000013731	-	53	77.632	Procavia_capensis
ENSCAPG00000017559	RPUSD3	99	81.749	ENSPCOG00000018314	RPUSD3	75	81.749	Propithecus_coquereli
ENSCAPG00000017559	RPUSD3	99	78.327	ENSPVAG00000011107	RPUSD3	75	78.327	Pteropus_vampyrus
ENSCAPG00000017559	RPUSD3	94	73.494	ENSRNOG00000009084	Rpusd3	78	73.494	Rattus_norvegicus
ENSCAPG00000017559	RPUSD3	98	83.077	ENSRBIG00000041230	RPUSD3	74	83.077	Rhinopithecus_bieti
ENSCAPG00000017559	RPUSD3	98	83.077	ENSRROG00000043328	RPUSD3	74	83.077	Rhinopithecus_roxellana
ENSCAPG00000017559	RPUSD3	98	79.615	ENSSBOG00000036106	RPUSD3	75	79.615	Saimiri_boliviensis_boliviensis
ENSCAPG00000017559	RPUSD3	98	63.462	ENSSHAG00000015536	RPUSD3	84	63.462	Sarcophilus_harrisii
ENSCAPG00000017559	RPUSD3	98	80.769	ENSSSCG00000011555	RPUSD3	74	80.769	Sus_scrofa
ENSCAPG00000017559	RPUSD3	89	51.031	ENSTGUG00000008744	RPUSD3	99	51.515	Taeniopygia_guttata
ENSCAPG00000017559	RPUSD3	95	72.464	ENSTBEG00000000176	RPUSD3	69	78.000	Tupaia_belangeri
ENSCAPG00000017559	RPUSD3	99	79.468	ENSTTRG00000007544	RPUSD3	75	79.468	Tursiops_truncatus
ENSCAPG00000017559	RPUSD3	99	79.087	ENSUAMG00000011354	RPUSD3	82	79.087	Ursus_americanus
ENSCAPG00000017559	RPUSD3	99	79.087	ENSUMAG00000018830	RPUSD3	75	79.087	Ursus_maritimus
ENSCAPG00000017559	RPUSD3	99	79.087	ENSVVUG00000023735	RPUSD3	76	79.087	Vulpes_vulpes
ENSCAPG00000017559	RPUSD3	98	46.947	ENSXETG00000023546	rpusd3	92	46.947	Xenopus_tropicalis