EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000017646 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 975 bases
Position: chrAVPZ01000445.1:5339839-5340813
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000018177	Ribosomal_L10	PF00466.20	1.7e-20	1	1
ENSCAPP00000018178	Ribosomal_L10	PF00466.20	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021988	-	489	-	ENSCAPP00000018178	162 (aa)	-	-
ENSCAPT00000021987	-	456	-	ENSCAPP00000018177	151 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000017646	-	86	67.857	ENSCAPG00000015719	-	83	67.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017646	-	95	91.026	ENSG00000089157	RPLP0	97	99.074	Homo_sapiens
ENSCAPG00000017646	-	88	91.724	ENSAPOG00000003585	rplp0	58	91.724	Acanthochromis_polyacanthus
ENSCAPG00000017646	-	88	91.724	ENSACIG00000017423	rplp0	57	91.724	Amphilophus_citrinellus
ENSCAPG00000017646	-	88	91.724	ENSAOCG00000003922	rplp0	57	91.724	Amphiprion_ocellaris
ENSCAPG00000017646	-	88	91.724	ENSAPEG00000003530	rplp0	57	91.724	Amphiprion_percula
ENSCAPG00000017646	-	88	89.655	ENSATEG00000023848	rplp0	57	89.655	Anabas_testudineus
ENSCAPG00000017646	-	93	77.778	ENSANAG00000028224	-	92	77.778	Aotus_nancymaae
ENSCAPG00000017646	-	90	86.395	ENSANAG00000035111	-	92	86.395	Aotus_nancymaae
ENSCAPG00000017646	-	85	87.770	ENSANAG00000035423	-	85	87.770	Aotus_nancymaae
ENSCAPG00000017646	-	85	81.022	ENSANAG00000021939	-	70	81.022	Aotus_nancymaae
ENSCAPG00000017646	-	88	95.172	ENSANAG00000032450	RPLP0	57	95.172	Aotus_nancymaae
ENSCAPG00000017646	-	88	91.724	ENSACLG00000010838	rplp0	57	91.724	Astatotilapia_calliptera
ENSCAPG00000017646	-	88	95.172	ENSCJAG00000008677	RPLP0	57	95.172	Callithrix_jacchus
ENSCAPG00000017646	-	87	86.525	ENSCJAG00000002085	-	95	86.525	Callithrix_jacchus
ENSCAPG00000017646	-	85	79.286	ENSCAFG00020026992	-	84	79.286	Canis_lupus_dingo
ENSCAPG00000017646	-	91	67.785	ENSCAFG00020012087	-	51	67.114	Canis_lupus_dingo
ENSCAPG00000017646	-	98	69.753	ENSCHIG00000023085	-	74	77.698	Capra_hircus
ENSCAPG00000017646	-	91	68.456	ENSCHIG00000016635	-	52	68.456	Capra_hircus
ENSCAPG00000017646	-	88	82.759	ENSTSYG00000032231	-	80	80.833	Carlito_syrichta
ENSCAPG00000017646	-	85	84.286	ENSTSYG00000028458	-	93	84.286	Carlito_syrichta
ENSCAPG00000017646	-	88	76.552	ENSTSYG00000035265	-	51	76.552	Carlito_syrichta
ENSCAPG00000017646	-	88	95.172	ENSTSYG00000009732	-	57	95.172	Carlito_syrichta
ENSCAPG00000017646	-	90	76.351	ENSTSYG00000029724	-	59	75.676	Carlito_syrichta
ENSCAPG00000017646	-	86	92.806	ENSTSYG00000028174	-	75	91.270	Carlito_syrichta
ENSCAPG00000017646	-	90	90.541	ENSTSYG00000037292	-	81	91.724	Carlito_syrichta
ENSCAPG00000017646	-	99	74.847	ENSTSYG00000035143	-	94	74.847	Carlito_syrichta
ENSCAPG00000017646	-	86	67.857	ENSCPOG00000035724	-	83	67.857	Cavia_porcellus
ENSCAPG00000017646	-	91	92.617	ENSCCAG00000029483	-	79	92.617	Cebus_capucinus
ENSCAPG00000017646	-	85	70.769	ENSCCAG00000024489	-	94	70.769	Cebus_capucinus
ENSCAPG00000017646	-	88	95.172	ENSCCAG00000020666	RPLP0	57	95.172	Cebus_capucinus
ENSCAPG00000017646	-	91	92.617	ENSCATG00000042106	-	87	92.617	Cercocebus_atys
ENSCAPG00000017646	-	86	86.331	ENSCATG00000038917	-	76	86.331	Cercocebus_atys
ENSCAPG00000017646	-	90	72.297	ENSCATG00000011638	-	53	72.297	Cercocebus_atys
ENSCAPG00000017646	-	88	94.483	ENSCATG00000033083	-	57	94.483	Cercocebus_atys
ENSCAPG00000017646	-	89	71.918	ENSCATG00000016830	-	57	71.918	Cercocebus_atys
ENSCAPG00000017646	-	90	93.919	ENSCPBG00000011382	RPLP0	90	93.919	Chrysemys_picta_bellii
ENSCAPG00000017646	-	90	76.871	ENSCSAVG00000006184	-	59	76.871	Ciona_savignyi
ENSCAPG00000017646	-	89	86.301	ENSCANG00000033275	-	91	85.315	Colobus_angolensis_palliatus
ENSCAPG00000017646	-	88	95.172	ENSCANG00000040170	RPLP0	57	95.172	Colobus_angolensis_palliatus
ENSCAPG00000017646	-	88	87.586	ENSCANG00000032086	-	85	83.942	Colobus_angolensis_palliatus
ENSCAPG00000017646	-	86	84.173	ENSCANG00000043482	-	82	83.571	Colobus_angolensis_palliatus
ENSCAPG00000017646	-	88	72.414	ENSCANG00000005842	-	51	72.414	Colobus_angolensis_palliatus
ENSCAPG00000017646	-	88	79.310	ENSCGRG00001013461	-	56	79.310	Cricetulus_griseus_chok1gshd
ENSCAPG00000017646	-	88	87.586	ENSCGRG00001021440	-	50	87.586	Cricetulus_griseus_chok1gshd
ENSCAPG00000017646	-	89	81.507	ENSCGRG00001010476	-	90	81.507	Cricetulus_griseus_chok1gshd
ENSCAPG00000017646	-	88	77.241	ENSCGRG00000009505	-	56	77.241	Cricetulus_griseus_crigri
ENSCAPG00000017646	-	88	80.690	ENSCGRG00000013855	-	90	80.690	Cricetulus_griseus_crigri
ENSCAPG00000017646	-	88	88.966	ENSCSEG00000005766	rplp0	57	88.966	Cynoglossus_semilaevis
ENSCAPG00000017646	-	88	91.034	ENSCVAG00000002662	rplp0	58	91.034	Cyprinodon_variegatus
ENSCAPG00000017646	-	89	91.781	ENSDARG00000051783	rplp0	94	91.781	Danio_rerio
ENSCAPG00000017646	-	88	95.172	ENSDNOG00000044347	-	53	95.172	Dasypus_novemcinctus
ENSCAPG00000017646	-	92	91.613	ENSEASG00005005174	-	93	91.613	Equus_asinus_asinus
ENSCAPG00000017646	-	88	92.414	ENSELUG00000023779	rplp0	57	92.414	Esox_lucius
ENSCAPG00000017646	-	88	95.172	ENSFCAG00000013354	-	57	95.172	Felis_catus
ENSCAPG00000017646	-	86	73.050	ENSFDAG00000011933	-	59	73.571	Fukomys_damarensis
ENSCAPG00000017646	-	88	91.724	ENSFHEG00000003767	rplp0	57	91.724	Fundulus_heteroclitus
ENSCAPG00000017646	-	59	92.135	ENSGMOG00000017623	rplp0	100	92.135	Gadus_morhua
ENSCAPG00000017646	-	88	91.034	ENSGAFG00000021530	rplp0	58	91.034	Gambusia_affinis
ENSCAPG00000017646	-	88	95.172	ENSGGOG00000026582	RPLP0	57	95.172	Gorilla_gorilla
ENSCAPG00000017646	-	62	82.796	ENSGGOG00000028143	-	61	82.178	Gorilla_gorilla
ENSCAPG00000017646	-	84	87.681	ENSGGOG00000042672	-	85	87.681	Gorilla_gorilla
ENSCAPG00000017646	-	88	91.724	ENSHBUG00000022184	rplp0	57	91.724	Haplochromis_burtoni
ENSCAPG00000017646	-	85	74.101	ENSHGLG00100002758	-	90	74.101	Heterocephalus_glaber_male
ENSCAPG00000017646	-	88	91.034	ENSIPUG00000011275	rplp0	50	91.034	Ictalurus_punctatus
ENSCAPG00000017646	-	97	73.469	ENSJJAG00000013447	-	75	78.231	Jaculus_jaculus
ENSCAPG00000017646	-	88	84.828	ENSJJAG00000019910	-	91	82.734	Jaculus_jaculus
ENSCAPG00000017646	-	88	91.034	ENSKMAG00000000169	rplp0	58	91.034	Kryptolebias_marmoratus
ENSCAPG00000017646	-	88	89.655	ENSLBEG00000015382	rplp0	56	71.823	Labrus_bergylta
ENSCAPG00000017646	-	88	95.172	ENSMFAG00000044128	RPLP0	57	95.172	Macaca_fascicularis
ENSCAPG00000017646	-	87	70.629	ENSMFAG00000037366	-	92	70.629	Macaca_fascicularis
ENSCAPG00000017646	-	90	70.946	ENSMFAG00000033199	-	53	70.946	Macaca_fascicularis
ENSCAPG00000017646	-	88	94.483	ENSMFAG00000001123	-	84	94.483	Macaca_fascicularis
ENSCAPG00000017646	-	85	98.551	ENSMMUG00000009157	RPLP0	90	98.551	Macaca_mulatta
ENSCAPG00000017646	-	90	93.878	ENSMMUG00000011856	-	86	93.878	Macaca_mulatta
ENSCAPG00000017646	-	90	69.595	ENSMMUG00000031446	-	53	69.595	Macaca_mulatta
ENSCAPG00000017646	-	88	95.172	ENSMMUG00000044103	-	90	95.172	Macaca_mulatta
ENSCAPG00000017646	-	88	91.034	ENSMNEG00000045114	-	82	90.000	Macaca_nemestrina
ENSCAPG00000017646	-	86	87.050	ENSMNEG00000030898	-	51	87.050	Macaca_nemestrina
ENSCAPG00000017646	-	88	95.172	ENSMNEG00000030904	-	57	95.172	Macaca_nemestrina
ENSCAPG00000017646	-	90	94.000	ENSMNEG00000034833	-	80	94.000	Macaca_nemestrina
ENSCAPG00000017646	-	88	73.793	ENSMNEG00000036798	-	88	73.793	Macaca_nemestrina
ENSCAPG00000017646	-	88	90.345	ENSMLEG00000042283	-	88	85.106	Mandrillus_leucophaeus
ENSCAPG00000017646	-	88	82.069	ENSMLEG00000027377	-	82	80.822	Mandrillus_leucophaeus
ENSCAPG00000017646	-	94	82.237	ENSMLEG00000031105	-	90	82.237	Mandrillus_leucophaeus
ENSCAPG00000017646	-	88	95.172	ENSMLEG00000028407	-	57	95.172	Mandrillus_leucophaeus
ENSCAPG00000017646	-	88	90.345	ENSMAMG00000018183	rplp0	57	90.345	Mastacembelus_armatus
ENSCAPG00000017646	-	88	91.724	ENSMZEG00005026905	rplp0	57	91.724	Maylandia_zebra
ENSCAPG00000017646	-	88	73.793	ENSMAUG00000000601	-	61	73.103	Mesocricetus_auratus
ENSCAPG00000017646	-	92	94.702	ENSMICG00000012551	-	81	94.702	Microcebus_murinus
ENSCAPG00000017646	-	88	90.345	ENSMMOG00000004925	rplp0	57	90.345	Mola_mola
ENSCAPG00000017646	-	92	87.417	ENSMALG00000000780	rplp0	57	90.345	Monopterus_albus
ENSCAPG00000017646	-	88	94.483	MGP_CAROLIEiJ_G0027630	-	93	94.074	Mus_caroli
ENSCAPG00000017646	-	88	95.172	ENSMUSG00000067274	Rplp0	93	94.815	Mus_musculus
ENSCAPG00000017646	-	88	91.724	ENSNBRG00000017013	rplp0	57	91.724	Neolamprologus_brichardi
ENSCAPG00000017646	-	86	93.525	ENSNLEG00000031037	-	88	86.301	Nomascus_leucogenys
ENSCAPG00000017646	-	73	95.763	ENSNLEG00000034695	-	77	95.763	Nomascus_leucogenys
ENSCAPG00000017646	-	88	95.172	ENSNLEG00000000292	RPLP0	57	95.172	Nomascus_leucogenys
ENSCAPG00000017646	-	90	88.514	ENSODEG00000005297	-	58	88.514	Octodon_degus
ENSCAPG00000017646	-	84	92.754	ENSODEG00000013637	-	59	92.754	Octodon_degus
ENSCAPG00000017646	-	75	87.603	ENSODEG00000004775	-	50	87.603	Octodon_degus
ENSCAPG00000017646	-	84	94.574	ENSODEG00000000146	-	93	94.656	Octodon_degus
ENSCAPG00000017646	-	88	93.103	ENSOANG00000006524	RPLP0	54	93.103	Ornithorhynchus_anatinus
ENSCAPG00000017646	-	88	91.034	ENSORLG00000009174	rplp0	57	91.034	Oryzias_latipes
ENSCAPG00000017646	-	88	91.034	ENSORLG00020007945	rplp0	57	91.034	Oryzias_latipes_hni
ENSCAPG00000017646	-	88	91.034	ENSORLG00015003627	rplp0	57	91.034	Oryzias_latipes_hsok
ENSCAPG00000017646	-	88	91.034	ENSOMEG00000002155	rplp0	57	91.034	Oryzias_melastigma
ENSCAPG00000017646	-	88	91.034	ENSPPAG00000041393	-	76	91.034	Pan_paniscus
ENSCAPG00000017646	-	88	86.620	ENSPPAG00000031575	-	55	86.620	Pan_paniscus
ENSCAPG00000017646	-	95	89.172	ENSPPAG00000007358	-	67	89.172	Pan_paniscus
ENSCAPG00000017646	-	88	73.793	ENSPPAG00000006620	-	52	73.793	Pan_paniscus
ENSCAPG00000017646	-	88	95.172	ENSPPAG00000029479	-	57	95.172	Pan_paniscus
ENSCAPG00000017646	-	88	95.172	ENSPPRG00000024600	-	57	95.172	Panthera_pardus
ENSCAPG00000017646	-	88	95.172	ENSPTIG00000001811	-	57	95.172	Panthera_tigris_altaica
ENSCAPG00000017646	-	88	88.276	ENSPTRG00000005526	-	52	88.276	Pan_troglodytes
ENSCAPG00000017646	-	88	95.172	ENSPTRG00000048939	-	57	95.172	Pan_troglodytes
ENSCAPG00000017646	-	88	87.324	ENSPTRG00000043757	-	55	87.324	Pan_troglodytes
ENSCAPG00000017646	-	88	73.793	ENSPTRG00000043789	-	82	73.793	Pan_troglodytes
ENSCAPG00000017646	-	88	95.172	ENSPTRG00000044613	-	57	95.172	Pan_troglodytes
ENSCAPG00000017646	-	92	92.715	ENSPANG00000031665	-	91	94.964	Papio_anubis
ENSCAPG00000017646	-	89	73.973	ENSPANG00000033377	-	57	73.973	Papio_anubis
ENSCAPG00000017646	-	86	86.331	ENSPANG00000009434	-	83	85.714	Papio_anubis
ENSCAPG00000017646	-	88	91.034	ENSPANG00000035141	-	89	89.313	Papio_anubis
ENSCAPG00000017646	-	88	95.172	ENSPANG00000031704	-	57	95.172	Papio_anubis
ENSCAPG00000017646	-	88	91.034	ENSPMGG00000007786	rplp0	57	91.034	Periophthalmus_magnuspinnatus
ENSCAPG00000017646	-	88	79.310	ENSPEMG00000000820	-	57	79.310	Peromyscus_maniculatus_bairdii
ENSCAPG00000017646	-	88	76.552	ENSPEMG00000003630	-	50	76.552	Peromyscus_maniculatus_bairdii
ENSCAPG00000017646	-	90	68.919	ENSPCIG00000005179	-	55	68.919	Phascolarctos_cinereus
ENSCAPG00000017646	-	87	70.213	ENSPCIG00000011267	-	53	70.213	Phascolarctos_cinereus
ENSCAPG00000017646	-	88	91.034	ENSPLAG00000010747	rplp0	58	91.034	Poecilia_latipinna
ENSCAPG00000017646	-	88	91.034	ENSPMEG00000022479	rplp0	58	91.034	Poecilia_mexicana
ENSCAPG00000017646	-	88	90.345	ENSPREG00000000647	rplp0	58	90.345	Poecilia_reticulata
ENSCAPG00000017646	-	92	95.364	ENSPCOG00000015492	RPLP0	93	95.364	Propithecus_coquereli
ENSCAPG00000017646	-	88	91.724	ENSPNYG00000004672	rplp0	57	91.724	Pundamilia_nyererei
ENSCAPG00000017646	-	88	68.276	ENSRBIG00000040236	-	91	67.669	Rhinopithecus_bieti
ENSCAPG00000017646	-	88	86.897	ENSRBIG00000029304	-	92	78.912	Rhinopithecus_bieti
ENSCAPG00000017646	-	88	73.793	ENSRBIG00000033981	-	63	73.793	Rhinopithecus_bieti
ENSCAPG00000017646	-	86	82.734	ENSRBIG00000031119	-	85	80.153	Rhinopithecus_bieti
ENSCAPG00000017646	-	88	95.172	ENSRBIG00000041005	-	57	95.172	Rhinopithecus_bieti
ENSCAPG00000017646	-	95	89.744	ENSRBIG00000000546	-	89	93.182	Rhinopithecus_bieti
ENSCAPG00000017646	-	88	81.690	ENSRROG00000043436	-	54	81.690	Rhinopithecus_roxellana
ENSCAPG00000017646	-	95	89.744	ENSRROG00000032365	-	89	93.182	Rhinopithecus_roxellana
ENSCAPG00000017646	-	89	85.616	ENSRROG00000029990	-	91	84.615	Rhinopithecus_roxellana
ENSCAPG00000017646	-	90	68.243	ENSRROG00000035312	-	55	68.243	Rhinopithecus_roxellana
ENSCAPG00000017646	-	88	94.483	ENSRROG00000042588	-	57	94.483	Rhinopithecus_roxellana
ENSCAPG00000017646	-	92	92.053	ENSRROG00000040312	-	90	92.053	Rhinopithecus_roxellana
ENSCAPG00000017646	-	88	90.345	ENSRROG00000037708	-	92	81.633	Rhinopithecus_roxellana
ENSCAPG00000017646	-	95	91.667	ENSSBOG00000032238	-	92	94.656	Saimiri_boliviensis_boliviensis
ENSCAPG00000017646	-	88	87.586	ENSSBOG00000032913	-	89	87.586	Saimiri_boliviensis_boliviensis
ENSCAPG00000017646	-	88	90.345	ENSSMAG00000008680	rplp0	57	90.345	Scophthalmus_maximus
ENSCAPG00000017646	-	88	91.034	ENSSDUG00000022776	rplp0	57	91.034	Seriola_dumerili
ENSCAPG00000017646	-	88	91.034	ENSSLDG00000018979	rplp0	57	91.034	Seriola_lalandi_dorsalis
ENSCAPG00000017646	-	85	98.540	ENSSARG00000006428	-	69	98.540	Sorex_araneus
ENSCAPG00000017646	-	88	91.034	ENSSPAG00000013438	rplp0	57	91.034	Stegastes_partitus
ENSCAPG00000017646	-	97	83.019	ENSTRUG00000015859	rplp0	58	88.276	Takifugu_rubripes
ENSCAPG00000017646	-	92	94.702	ENSVVUG00000020750	-	93	94.702	Vulpes_vulpes
ENSCAPG00000017646	-	91	87.919	ENSVVUG00000016021	-	54	87.919	Vulpes_vulpes
ENSCAPG00000017646	-	85	79.286	ENSVVUG00000027618	-	84	79.286	Vulpes_vulpes
ENSCAPG00000017646	-	88	91.034	ENSXCOG00000017623	rplp0	58	91.034	Xiphophorus_couchianus
ENSCAPG00000017646	-	88	91.034	ENSXMAG00000018367	rplp0	58	91.034	Xiphophorus_maculatus