EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000017669 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 316228 bases
Position: chrAVPZ01000445.1:26725092-27041319
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000018213	Fox-1_C	PF12414.8	7.5e-43	1	1
ENSCAPP00000018210	Fox-1_C	PF12414.8	8.8e-41	1	1
ENSCAPP00000018210	RRM_1	PF00076.22	2e-18	1	1
ENSCAPP00000018213	RRM_1	PF00076.22	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000022020	RBFOX1-201	1257	-	ENSCAPP00000018210	418 (aa)	-	UPI000184FDC3
ENSCAPT00000022023	RBFOX1-202	1167	-	ENSCAPP00000018213	388 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000017669	RBFOX1	90	64.345	ENSCAPG00000014308	RBFOX2	92	61.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017669	RBFOX1	100	98.196	ENSG00000078328	RBFOX1	100	97.368	Homo_sapiens
ENSCAPG00000017669	RBFOX1	100	76.108	ENSAPOG00000003197	rbfox1	98	76.601	Acanthochromis_polyacanthus
ENSCAPG00000017669	RBFOX1	60	94.400	ENSAMEG00000008605	RBFOX1	100	94.400	Ailuropoda_melanoleuca
ENSCAPG00000017669	RBFOX1	69	64.865	ENSACIG00000005478	rbfox1	68	65.320	Amphilophus_citrinellus
ENSCAPG00000017669	RBFOX1	74	71.242	ENSAOCG00000008283	rbfox1	96	71.010	Amphiprion_ocellaris
ENSCAPG00000017669	RBFOX1	97	71.693	ENSAPEG00000010636	rbfox1	100	71.579	Amphiprion_percula
ENSCAPG00000017669	RBFOX1	74	69.805	ENSATEG00000007513	rbfox1	97	69.132	Anabas_testudineus
ENSCAPG00000017669	RBFOX1	100	94.072	ENSAPLG00000013263	RBFOX1	97	94.072	Anas_platyrhynchos
ENSCAPG00000017669	RBFOX1	100	87.212	ENSACAG00000004013	RBFOX1	98	87.212	Anolis_carolinensis
ENSCAPG00000017669	RBFOX1	100	96.144	ENSANAG00000029527	RBFOX1	98	98.205	Aotus_nancymaae
ENSCAPG00000017669	RBFOX1	57	86.937	ENSAMXG00000002431	rbfox1	72	78.656	Astyanax_mexicanus
ENSCAPG00000017669	RBFOX1	100	96.144	ENSBTAG00000007210	RBFOX1	98	98.205	Bos_taurus
ENSCAPG00000017669	RBFOX1	100	98.196	ENSCJAG00000017351	RBFOX1	100	97.368	Callithrix_jacchus
ENSCAPG00000017669	RBFOX1	100	97.608	ENSCAFG00000019082	RBFOX1	100	97.608	Canis_familiaris
ENSCAPG00000017669	RBFOX1	71	97.297	ENSCAFG00020024881	RBFOX1	83	97.297	Canis_lupus_dingo
ENSCAPG00000017669	RBFOX1	100	96.144	ENSCHIG00000023549	RBFOX1	98	98.205	Capra_hircus
ENSCAPG00000017669	RBFOX1	100	95.887	ENSTSYG00000005334	RBFOX1	100	97.943	Carlito_syrichta
ENSCAPG00000017669	RBFOX1	100	100.000	ENSCPOG00000011314	RBFOX1	100	100.000	Cavia_porcellus
ENSCAPG00000017669	RBFOX1	100	97.368	ENSCCAG00000023031	RBFOX1	100	97.368	Cebus_capucinus
ENSCAPG00000017669	RBFOX1	100	97.368	ENSCATG00000033816	RBFOX1	100	97.368	Cercocebus_atys
ENSCAPG00000017669	RBFOX1	100	99.522	ENSCLAG00000012761	RBFOX1	100	99.522	Chinchilla_lanigera
ENSCAPG00000017669	RBFOX1	85	96.364	ENSCSAG00000008739	RBFOX1	88	96.364	Chlorocebus_sabaeus
ENSCAPG00000017669	RBFOX1	100	75.837	ENSCHOG00000012843	RBFOX1	100	75.837	Choloepus_hoffmanni
ENSCAPG00000017669	RBFOX1	100	94.072	ENSCPBG00000026626	RBFOX1	98	93.846	Chrysemys_picta_bellii
ENSCAPG00000017669	RBFOX1	100	97.368	ENSCANG00000033125	RBFOX1	100	97.368	Colobus_angolensis_palliatus
ENSCAPG00000017669	RBFOX1	100	97.165	ENSCGRG00001013729	Rbfox1	100	96.651	Cricetulus_griseus_chok1gshd
ENSCAPG00000017669	RBFOX1	100	97.165	ENSCGRG00000003272	Rbfox1	100	96.651	Cricetulus_griseus_crigri
ENSCAPG00000017669	RBFOX1	97	71.537	ENSCSEG00000008840	rbfox1	100	71.537	Cynoglossus_semilaevis
ENSCAPG00000017669	RBFOX1	100	80.977	ENSDARG00000014746	rbfox1	100	86.341	Danio_rerio
ENSCAPG00000017669	RBFOX1	100	98.196	ENSDNOG00000043612	RBFOX1	99	92.252	Dasypus_novemcinctus
ENSCAPG00000017669	RBFOX1	100	95.652	ENSDORG00000010024	Rbfox1	97	95.652	Dipodomys_ordii
ENSCAPG00000017669	RBFOX1	100	78.230	ENSETEG00000003771	RBFOX1	100	78.230	Echinops_telfairi
ENSCAPG00000017669	RBFOX1	100	98.969	ENSEASG00005011599	RBFOX1	98	98.974	Equus_asinus_asinus
ENSCAPG00000017669	RBFOX1	100	97.172	ENSECAG00000012667	RBFOX1	98	98.272	Equus_caballus
ENSCAPG00000017669	RBFOX1	84	69.412	ENSELUG00000013096	rbfox1	96	69.412	Esox_lucius
ENSCAPG00000017669	RBFOX1	100	98.196	ENSFCAG00000025322	RBFOX1	89	98.196	Felis_catus
ENSCAPG00000017669	RBFOX1	83	94.099	ENSFALG00000004027	RBFOX1	97	94.099	Ficedula_albicollis
ENSCAPG00000017669	RBFOX1	100	99.522	ENSFDAG00000007388	RBFOX1	100	99.522	Fukomys_damarensis
ENSCAPG00000017669	RBFOX1	100	92.105	ENSGALG00000034325	RBFOX1	100	92.105	Gallus_gallus
ENSCAPG00000017669	RBFOX1	100	91.517	ENSGAGG00000023681	RBFOX1	100	94.164	Gopherus_agassizii
ENSCAPG00000017669	RBFOX1	100	97.368	ENSGGOG00000016871	-	100	97.368	Gorilla_gorilla
ENSCAPG00000017669	RBFOX1	100	99.282	ENSHGLG00000016944	RBFOX1	100	99.282	Heterocephalus_glaber_female
ENSCAPG00000017669	RBFOX1	100	99.282	ENSHGLG00100003272	RBFOX1	100	99.282	Heterocephalus_glaber_male
ENSCAPG00000017669	RBFOX1	87	70.893	ENSHCOG00000016419	rbfox1	91	70.977	Hippocampus_comes
ENSCAPG00000017669	RBFOX1	97	83.289	ENSIPUG00000015215	rbfox1	100	83.289	Ictalurus_punctatus
ENSCAPG00000017669	RBFOX1	100	97.680	ENSSTOG00000000322	RBFOX1	100	96.651	Ictidomys_tridecemlineatus
ENSCAPG00000017669	RBFOX1	100	94.330	ENSJJAG00000002575	Rbfox1	100	94.019	Jaculus_jaculus
ENSCAPG00000017669	RBFOX1	100	73.485	ENSLBEG00000014659	rbfox1	98	73.232	Labrus_bergylta
ENSCAPG00000017669	RBFOX1	100	86.189	ENSLOCG00000006675	rbfox1	98	86.189	Lepisosteus_oculatus
ENSCAPG00000017669	RBFOX1	79	98.377	ENSLAFG00000011480	RBFOX1	100	98.701	Loxodonta_africana
ENSCAPG00000017669	RBFOX1	100	97.129	ENSMFAG00000036447	RBFOX1	100	97.129	Macaca_fascicularis
ENSCAPG00000017669	RBFOX1	100	97.129	ENSMMUG00000003458	RBFOX1	100	97.129	Macaca_mulatta
ENSCAPG00000017669	RBFOX1	100	97.129	ENSMNEG00000032034	RBFOX1	100	97.129	Macaca_nemestrina
ENSCAPG00000017669	RBFOX1	100	97.368	ENSMLEG00000015382	RBFOX1	100	97.368	Mandrillus_leucophaeus
ENSCAPG00000017669	RBFOX1	97	75.000	ENSMAMG00000003142	rbfox1	100	75.510	Mastacembelus_armatus
ENSCAPG00000017669	RBFOX1	72	88.214	ENSMGAG00000008606	RBFOX1	96	87.143	Meleagris_gallopavo
ENSCAPG00000017669	RBFOX1	99	57.292	ENSMAUG00000020570	Rbfox1	96	56.250	Mesocricetus_auratus
ENSCAPG00000017669	RBFOX1	100	90.979	ENSMICG00000034286	RBFOX1	100	88.834	Microcebus_murinus
ENSCAPG00000017669	RBFOX1	100	97.423	ENSMOCG00000020932	Rbfox1	100	97.396	Microtus_ochrogaster
ENSCAPG00000017669	RBFOX1	88	71.304	ENSMMOG00000009716	rbfox1	86	71.681	Mola_mola
ENSCAPG00000017669	RBFOX1	82	94.357	ENSMODG00000005826	RBFOX1	90	94.357	Monodelphis_domestica
ENSCAPG00000017669	RBFOX1	100	76.500	ENSMALG00000003337	rbfox1	98	76.500	Monopterus_albus
ENSCAPG00000017669	RBFOX1	100	97.423	MGP_CAROLIEiJ_G0020427	Rbfox1	100	96.890	Mus_caroli
ENSCAPG00000017669	RBFOX1	100	97.165	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSCAPG00000017669	RBFOX1	100	97.423	MGP_PahariEiJ_G0016135	Rbfox1	100	96.890	Mus_pahari
ENSCAPG00000017669	RBFOX1	100	96.907	MGP_SPRETEiJ_G0021321	Rbfox1	100	96.411	Mus_spretus
ENSCAPG00000017669	RBFOX1	85	96.364	ENSMPUG00000014822	RBFOX1	91	93.333	Mustela_putorius_furo
ENSCAPG00000017669	RBFOX1	79	99.023	ENSMLUG00000015896	RBFOX1	100	99.023	Myotis_lucifugus
ENSCAPG00000017669	RBFOX1	100	97.938	ENSNGAG00000023276	Rbfox1	100	97.938	Nannospalax_galili
ENSCAPG00000017669	RBFOX1	99	61.165	ENSNBRG00000011084	rbfox1	94	61.259	Neolamprologus_brichardi
ENSCAPG00000017669	RBFOX1	100	97.129	ENSNLEG00000010017	-	100	97.129	Nomascus_leucogenys
ENSCAPG00000017669	RBFOX1	100	79.665	ENSMEUG00000012525	RBFOX1	100	79.665	Notamacropus_eugenii
ENSCAPG00000017669	RBFOX1	100	79.187	ENSOPRG00000006199	-	100	77.990	Ochotona_princeps
ENSCAPG00000017669	RBFOX1	100	98.565	ENSODEG00000013166	RBFOX1	100	98.565	Octodon_degus
ENSCAPG00000017669	RBFOX1	85	93.939	ENSOANG00000002379	RBFOX1	88	93.939	Ornithorhynchus_anatinus
ENSCAPG00000017669	RBFOX1	56	97.222	ENSOCUG00000001205	-	97	96.330	Oryctolagus_cuniculus
ENSCAPG00000017669	RBFOX1	100	98.196	ENSOGAG00000025535	RBFOX1	98	98.196	Otolemur_garnettii
ENSCAPG00000017669	RBFOX1	63	86.420	ENSOARG00000005135	RBFOX1	100	84.462	Ovis_aries
ENSCAPG00000017669	RBFOX1	100	98.196	ENSPPAG00000036238	-	100	98.196	Pan_paniscus
ENSCAPG00000017669	RBFOX1	100	97.368	ENSPPRG00000006546	RBFOX1	100	97.368	Panthera_pardus
ENSCAPG00000017669	RBFOX1	100	87.113	ENSPTIG00000021154	RBFOX1	99	86.340	Panthera_tigris_altaica
ENSCAPG00000017669	RBFOX1	100	97.368	ENSPTRG00000007744	RBFOX1	100	97.368	Pan_troglodytes
ENSCAPG00000017669	RBFOX1	100	97.368	ENSPANG00000026500	RBFOX1	100	97.368	Papio_anubis
ENSCAPG00000017669	RBFOX1	100	82.051	ENSPKIG00000009667	-	95	82.609	Paramormyrops_kingsleyae
ENSCAPG00000017669	RBFOX1	75	82.759	ENSPKIG00000019353	rbfox1	86	82.759	Paramormyrops_kingsleyae
ENSCAPG00000017669	RBFOX1	100	94.072	ENSPSIG00000006523	RBFOX1	97	94.072	Pelodiscus_sinensis
ENSCAPG00000017669	RBFOX1	100	97.423	ENSPEMG00000017607	Rbfox1	100	96.890	Peromyscus_maniculatus_bairdii
ENSCAPG00000017669	RBFOX1	75	92.069	ENSPCIG00000026887	RBFOX1	100	92.069	Phascolarctos_cinereus
ENSCAPG00000017669	RBFOX1	85	96.364	ENSPPYG00000007079	-	91	93.333	Pongo_abelii
ENSCAPG00000017669	RBFOX1	90	88.095	ENSPCAG00000002630	RBFOX1	100	88.095	Procavia_capensis
ENSCAPG00000017669	RBFOX1	100	97.368	ENSPCOG00000025687	RBFOX1	100	97.368	Propithecus_coquereli
ENSCAPG00000017669	RBFOX1	100	93.780	ENSPVAG00000013467	RBFOX1	100	93.780	Pteropus_vampyrus
ENSCAPG00000017669	RBFOX1	97	80.303	ENSPNAG00000023109	rbfox1	100	80.303	Pygocentrus_nattereri
ENSCAPG00000017669	RBFOX1	100	97.165	ENSRNOG00000002827	Rbfox1	100	94.737	Rattus_norvegicus
ENSCAPG00000017669	RBFOX1	100	98.196	ENSRBIG00000044478	RBFOX1	100	98.196	Rhinopithecus_bieti
ENSCAPG00000017669	RBFOX1	100	97.368	ENSRROG00000044411	RBFOX1	100	97.368	Rhinopithecus_roxellana
ENSCAPG00000017669	RBFOX1	100	98.196	ENSSBOG00000033726	RBFOX1	97	98.196	Saimiri_boliviensis_boliviensis
ENSCAPG00000017669	RBFOX1	100	93.041	ENSSHAG00000009257	RBFOX1	98	93.041	Sarcophilus_harrisii
ENSCAPG00000017669	RBFOX1	100	68.622	ENSSFOG00015023675	rbfox1	93	87.826	Scleropages_formosus
ENSCAPG00000017669	RBFOX1	90	70.225	ENSSFOG00015009955	-	87	68.182	Scleropages_formosus
ENSCAPG00000017669	RBFOX1	100	77.284	ENSSMAG00000015505	rbfox1	96	73.460	Scophthalmus_maximus
ENSCAPG00000017669	RBFOX1	100	74.745	ENSSDUG00000016413	rbfox1	99	74.490	Seriola_dumerili
ENSCAPG00000017669	RBFOX1	87	72.647	ENSSLDG00000009353	rbfox1	95	72.171	Seriola_lalandi_dorsalis
ENSCAPG00000017669	RBFOX1	87	81.765	ENSSPUG00000009732	RBFOX1	87	81.818	Sphenodon_punctatus
ENSCAPG00000017669	RBFOX1	100	76.355	ENSSPAG00000009723	rbfox1	100	76.108	Stegastes_partitus
ENSCAPG00000017669	RBFOX1	97	98.133	ENSSSCG00000007917	RBFOX1	98	97.284	Sus_scrofa
ENSCAPG00000017669	RBFOX1	100	94.330	ENSTGUG00000004562	RBFOX1	99	94.330	Taeniopygia_guttata
ENSCAPG00000017669	RBFOX1	100	76.049	ENSTRUG00000020940	rbfox1	99	76.049	Takifugu_rubripes
ENSCAPG00000017669	RBFOX1	69	57.325	ENSTNIG00000002567	rbfox1	100	58.917	Tetraodon_nigroviridis
ENSCAPG00000017669	RBFOX1	81	82.759	ENSTBEG00000009169	-	81	82.759	Tupaia_belangeri
ENSCAPG00000017669	RBFOX1	100	97.368	ENSTTRG00000005700	RBFOX1	100	97.368	Tursiops_truncatus
ENSCAPG00000017669	RBFOX1	99	93.995	ENSUAMG00000024633	RBFOX1	97	93.995	Ursus_americanus
ENSCAPG00000017669	RBFOX1	99	85.117	ENSUMAG00000003579	RBFOX1	97	85.117	Ursus_maritimus
ENSCAPG00000017669	RBFOX1	81	98.701	ENSVPAG00000001284	RBFOX1	81	98.701	Vicugna_pacos
ENSCAPG00000017669	RBFOX1	100	98.196	ENSVVUG00000017311	RBFOX1	89	98.196	Vulpes_vulpes