EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000017776 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 14149 bases
Position: chrAVPZ01000211.1:25373882-25388030
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000018365	MMR_HSR1	PF01926.23	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000022175	-	1083	-	ENSCAPP00000018365	360 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000017776	-	83	58.194	ENSCAPG00000013691	SEPT12	90	55.046
ENSCAPG00000017776	-	83	72.093	ENSCAPG00000000257	SEPT9	90	72.093
ENSCAPG00000017776	-	100	88.056	ENSCAPG00000007508	-	100	88.056
ENSCAPG00000017776	-	87	43.450	ENSCAPG00000011190	SEPT8	73	43.450
ENSCAPG00000017776	-	76	40.072	ENSCAPG00000001347	SEPT1	82	40.072
ENSCAPG00000017776	-	85	49.351	ENSCAPG00000006545	-	93	51.042
ENSCAPG00000017776	-	83	39.542	ENSCAPG00000015684	SEPT11	68	39.542
ENSCAPG00000017776	-	83	44.333	ENSCAPG00000000080	SEPT14	71	44.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017776	-	100	98.333	ENSG00000100167	SEPT3	100	99.438	Homo_sapiens
ENSCAPG00000017776	-	83	88.333	ENSAPOG00000003795	sept3	75	87.708	Acanthochromis_polyacanthus
ENSCAPG00000017776	-	98	98.870	ENSAMEG00000009380	SEPT3	99	98.870	Ailuropoda_melanoleuca
ENSCAPG00000017776	-	83	86.667	ENSACIG00000001821	sept3	75	85.902	Amphilophus_citrinellus
ENSCAPG00000017776	-	83	87.667	ENSAOCG00000003633	sept3	73	87.129	Amphiprion_ocellaris
ENSCAPG00000017776	-	83	88.000	ENSAPEG00000022582	sept3	96	85.978	Amphiprion_percula
ENSCAPG00000017776	-	92	79.822	ENSATEG00000000191	sept3	93	79.822	Anabas_testudineus
ENSCAPG00000017776	-	92	96.375	ENSAPLG00000002801	SEPT3	98	96.375	Anas_platyrhynchos
ENSCAPG00000017776	-	92	96.677	ENSACAG00000003974	SEPT3	95	96.677	Anolis_carolinensis
ENSCAPG00000017776	-	100	98.056	ENSANAG00000019445	SEPT3	100	98.980	Aotus_nancymaae
ENSCAPG00000017776	-	83	87.333	ENSACLG00000009596	-	80	83.113	Astatotilapia_calliptera
ENSCAPG00000017776	-	90	85.976	ENSAMXG00000018729	sept3	96	85.976	Astyanax_mexicanus
ENSCAPG00000017776	-	98	98.588	ENSBTAG00000013173	SEPT3	99	98.588	Bos_taurus
ENSCAPG00000017776	-	100	97.778	ENSCJAG00000043636	SEPT3	100	98.639	Callithrix_jacchus
ENSCAPG00000017776	-	98	99.435	ENSCAFG00000000995	SEPT3	97	99.435	Canis_familiaris
ENSCAPG00000017776	-	98	98.870	ENSCHIG00000016257	SEPT3	99	98.870	Capra_hircus
ENSCAPG00000017776	-	100	98.056	ENSTSYG00000012514	SEPT3	100	98.639	Carlito_syrichta
ENSCAPG00000017776	-	99	86.197	ENSCPOG00000004011	-	99	86.197	Cavia_porcellus
ENSCAPG00000017776	-	100	98.889	ENSCPOG00000013212	-	100	98.889	Cavia_porcellus
ENSCAPG00000017776	-	100	98.056	ENSCCAG00000022439	SEPT3	100	98.980	Cebus_capucinus
ENSCAPG00000017776	-	100	98.611	ENSCATG00000045173	SEPT3	100	98.980	Cercocebus_atys
ENSCAPG00000017776	-	100	98.056	ENSCLAG00000017190	SEPT3	100	98.056	Chinchilla_lanigera
ENSCAPG00000017776	-	100	98.611	ENSCSAG00000005722	SEPT3	100	98.611	Chlorocebus_sabaeus
ENSCAPG00000017776	-	92	96.375	ENSCPBG00000020516	SEPT3	95	96.375	Chrysemys_picta_bellii
ENSCAPG00000017776	-	98	99.718	ENSCANG00000030048	SEPT3	100	99.718	Colobus_angolensis_palliatus
ENSCAPG00000017776	-	100	98.056	ENSCGRG00001018092	Sept3	100	98.056	Cricetulus_griseus_chok1gshd
ENSCAPG00000017776	-	90	100.000	ENSCGRG00000016977	Sept3	96	100.000	Cricetulus_griseus_crigri
ENSCAPG00000017776	-	83	87.625	ENSCVAG00000023430	sept3	74	86.842	Cyprinodon_variegatus
ENSCAPG00000017776	-	90	80.516	ENSDARG00000030656	sept3	96	80.516	Danio_rerio
ENSCAPG00000017776	-	93	98.503	ENSDNOG00000032372	SEPT3	87	98.503	Dasypus_novemcinctus
ENSCAPG00000017776	-	98	87.989	ENSDORG00000014056	Sept3	99	87.989	Dipodomys_ordii
ENSCAPG00000017776	-	72	100.000	ENSETEG00000004487	SEPT3	79	100.000	Echinops_telfairi
ENSCAPG00000017776	-	98	99.718	ENSEASG00005001015	-	99	99.713	Equus_asinus_asinus
ENSCAPG00000017776	-	98	99.718	ENSECAG00000023601	SEPT3	96	98.820	Equus_caballus
ENSCAPG00000017776	-	90	99.383	ENSEEUG00000011889	SEPT3	100	99.383	Erinaceus_europaeus
ENSCAPG00000017776	-	84	88.411	ENSELUG00000003004	sept3	97	77.198	Esox_lucius
ENSCAPG00000017776	-	100	98.333	ENSFCAG00000000889	SEPT3	100	98.980	Felis_catus
ENSCAPG00000017776	-	92	96.073	ENSFALG00000011773	SEPT3	95	96.073	Ficedula_albicollis
ENSCAPG00000017776	-	98	98.870	ENSFDAG00000010054	SEPT3	96	99.074	Fukomys_damarensis
ENSCAPG00000017776	-	85	85.993	ENSFHEG00000005258	sept3	75	85.256	Fundulus_heteroclitus
ENSCAPG00000017776	-	88	80.061	ENSGMOG00000005438	sept3	97	77.143	Gadus_morhua
ENSCAPG00000017776	-	92	95.770	ENSGALG00000011913	SEPT3	95	95.770	Gallus_gallus
ENSCAPG00000017776	-	83	88.000	ENSGAFG00000008333	sept3	73	87.748	Gambusia_affinis
ENSCAPG00000017776	-	89	82.132	ENSGACG00000015988	sept3	97	82.132	Gasterosteus_aculeatus
ENSCAPG00000017776	-	76	96.715	ENSGAGG00000005342	-	94	96.715	Gopherus_agassizii
ENSCAPG00000017776	-	100	98.333	ENSGGOG00000008961	SEPT3	100	98.980	Gorilla_gorilla
ENSCAPG00000017776	-	83	87.000	ENSHBUG00000005002	sept3	73	86.230	Haplochromis_burtoni
ENSCAPG00000017776	-	97	99.713	ENSHGLG00000006998	-	99	99.713	Heterocephalus_glaber_female
ENSCAPG00000017776	-	95	70.541	ENSHGLG00000020767	-	100	70.541	Heterocephalus_glaber_female
ENSCAPG00000017776	-	97	99.713	ENSHGLG00100007916	-	99	99.713	Heterocephalus_glaber_male
ENSCAPG00000017776	-	95	69.730	ENSHGLG00100019917	-	100	69.730	Heterocephalus_glaber_male
ENSCAPG00000017776	-	75	74.539	ENSHCOG00000016310	sept3	74	74.539	Hippocampus_comes
ENSCAPG00000017776	-	90	84.195	ENSIPUG00000021317	sept3	96	85.106	Ictalurus_punctatus
ENSCAPG00000017776	-	98	99.435	ENSSTOG00000012963	SEPT3	99	99.435	Ictidomys_tridecemlineatus
ENSCAPG00000017776	-	99	97.465	ENSJJAG00000019615	Sept3	99	97.465	Jaculus_jaculus
ENSCAPG00000017776	-	83	87.000	ENSKMAG00000021717	sept3	74	86.755	Kryptolebias_marmoratus
ENSCAPG00000017776	-	83	86.333	ENSLBEG00000019948	sept3	72	85.294	Labrus_bergylta
ENSCAPG00000017776	-	98	98.315	ENSLAFG00000015724	SEPT3	99	98.315	Loxodonta_africana
ENSCAPG00000017776	-	100	98.611	ENSMFAG00000039306	SEPT3	100	98.980	Macaca_fascicularis
ENSCAPG00000017776	-	100	98.611	ENSMMUG00000015139	SEPT3	100	98.980	Macaca_mulatta
ENSCAPG00000017776	-	100	98.611	ENSMNEG00000038786	SEPT3	100	98.980	Macaca_nemestrina
ENSCAPG00000017776	-	83	87.205	ENSMAMG00000004114	sept3	73	86.424	Mastacembelus_armatus
ENSCAPG00000017776	-	83	87.333	ENSMZEG00005023846	sept3	74	86.557	Maylandia_zebra
ENSCAPG00000017776	-	90	97.222	ENSMGAG00000012105	SEPT3	86	97.222	Meleagris_gallopavo
ENSCAPG00000017776	-	90	100.000	ENSMAUG00000014933	Sept3	96	100.000	Mesocricetus_auratus
ENSCAPG00000017776	-	100	98.056	ENSMICG00000003589	SEPT3	100	98.639	Microcebus_murinus
ENSCAPG00000017776	-	98	98.870	ENSMOCG00000015408	Sept3	99	98.870	Microtus_ochrogaster
ENSCAPG00000017776	-	90	84.356	ENSMMOG00000008339	sept3	97	84.356	Mola_mola
ENSCAPG00000017776	-	75	85.130	ENSMALG00000000364	sept3	94	85.130	Monopterus_albus
ENSCAPG00000017776	-	90	100.000	MGP_CAROLIEiJ_G0020078	Sept3	96	100.000	Mus_caroli
ENSCAPG00000017776	-	90	100.000	ENSMUSG00000022456	Sept3	96	100.000	Mus_musculus
ENSCAPG00000017776	-	90	100.000	MGP_PahariEiJ_G0020080	Sept3	96	100.000	Mus_pahari
ENSCAPG00000017776	-	90	100.000	MGP_SPRETEiJ_G0020978	Sept3	96	100.000	Mus_spretus
ENSCAPG00000017776	-	98	91.854	ENSMPUG00000016339	SEPT3	86	91.854	Mustela_putorius_furo
ENSCAPG00000017776	-	98	98.305	ENSMLUG00000002571	SEPT3	99	98.305	Myotis_lucifugus
ENSCAPG00000017776	-	99	99.155	ENSNGAG00000020671	Sept3	99	99.155	Nannospalax_galili
ENSCAPG00000017776	-	86	85.484	ENSNBRG00000018345	sept3	95	85.484	Neolamprologus_brichardi
ENSCAPG00000017776	-	98	98.870	ENSNLEG00000015691	SEPT3	100	98.639	Nomascus_leucogenys
ENSCAPG00000017776	-	98	98.305	ENSOPRG00000008638	SEPT3	99	98.305	Ochotona_princeps
ENSCAPG00000017776	-	97	99.714	ENSODEG00000012406	SEPT3	100	99.714	Octodon_degus
ENSCAPG00000017776	-	93	81.065	ENSONIG00000018012	sept3	97	83.680	Oreochromis_niloticus
ENSCAPG00000017776	-	76	95.307	ENSOANG00000004244	SEPT3	98	95.307	Ornithorhynchus_anatinus
ENSCAPG00000017776	-	98	98.870	ENSOCUG00000008260	SEPT3	62	98.870	Oryctolagus_cuniculus
ENSCAPG00000017776	-	83	87.000	ENSORLG00000004172	sept3	88	76.855	Oryzias_latipes
ENSCAPG00000017776	-	83	86.333	ENSORLG00020009259	sept3	77	86.093	Oryzias_latipes_hni
ENSCAPG00000017776	-	83	87.000	ENSORLG00015007295	sept3	97	80.480	Oryzias_latipes_hsok
ENSCAPG00000017776	-	83	87.333	ENSOMEG00000000404	sept3	94	85.874	Oryzias_melastigma
ENSCAPG00000017776	-	100	98.333	ENSOGAG00000014752	SEPT3	100	98.333	Otolemur_garnettii
ENSCAPG00000017776	-	98	98.870	ENSOARG00000018800	SEPT3	99	98.870	Ovis_aries
ENSCAPG00000017776	-	100	98.333	ENSPPAG00000013116	SEPT3	100	98.980	Pan_paniscus
ENSCAPG00000017776	-	100	98.333	ENSPPRG00000002117	SEPT3	100	98.980	Panthera_pardus
ENSCAPG00000017776	-	98	99.435	ENSPTIG00000011548	SEPT3	99	99.655	Panthera_tigris_altaica
ENSCAPG00000017776	-	100	98.333	ENSPTRG00000014444	SEPT3	100	98.980	Pan_troglodytes
ENSCAPG00000017776	-	100	98.611	ENSPANG00000009994	-	100	98.980	Papio_anubis
ENSCAPG00000017776	-	90	81.924	ENSPKIG00000002056	sept3	96	81.924	Paramormyrops_kingsleyae
ENSCAPG00000017776	-	90	97.222	ENSPSIG00000012269	SEPT3	96	97.222	Pelodiscus_sinensis
ENSCAPG00000017776	-	88	82.965	ENSPMGG00000006200	sept3	76	82.965	Periophthalmus_magnuspinnatus
ENSCAPG00000017776	-	98	98.864	ENSPEMG00000009916	Sept3	98	98.864	Peromyscus_maniculatus_bairdii
ENSCAPG00000017776	-	93	95.509	ENSPCIG00000004039	SEPT3	99	93.696	Phascolarctos_cinereus
ENSCAPG00000017776	-	93	83.432	ENSPFOG00000014541	sept3	95	83.432	Poecilia_formosa
ENSCAPG00000017776	-	83	88.000	ENSPLAG00000010228	sept3	71	87.748	Poecilia_latipinna
ENSCAPG00000017776	-	83	88.000	ENSPMEG00000019416	sept3	71	87.748	Poecilia_mexicana
ENSCAPG00000017776	-	84	87.417	ENSPREG00000012774	sept3	91	87.417	Poecilia_reticulata
ENSCAPG00000017776	-	100	89.444	ENSPPYG00000011886	SEPT3	100	89.444	Pongo_abelii
ENSCAPG00000017776	-	100	98.056	ENSPCOG00000024794	SEPT3	100	98.639	Propithecus_coquereli
ENSCAPG00000017776	-	98	98.870	ENSPVAG00000001191	SEPT3	99	98.870	Pteropus_vampyrus
ENSCAPG00000017776	-	83	87.000	ENSPNYG00000023957	sept3	74	86.230	Pundamilia_nyererei
ENSCAPG00000017776	-	90	83.537	ENSPNAG00000023001	sept3	96	83.841	Pygocentrus_nattereri
ENSCAPG00000017776	-	98	98.870	ENSRNOG00000007686	Sept3	99	98.870	Rattus_norvegicus
ENSCAPG00000017776	-	100	98.333	ENSRBIG00000040851	SEPT3	100	98.639	Rhinopithecus_bieti
ENSCAPG00000017776	-	98	92.373	ENSRROG00000042463	SEPT3	99	92.373	Rhinopithecus_roxellana
ENSCAPG00000017776	-	98	99.435	ENSSBOG00000024825	SEPT3	99	95.211	Saimiri_boliviensis_boliviensis
ENSCAPG00000017776	-	93	94.910	ENSSHAG00000012446	SEPT3	96	91.738	Sarcophilus_harrisii
ENSCAPG00000017776	-	90	80.857	ENSSFOG00015011047	sept3	96	81.714	Scleropages_formosus
ENSCAPG00000017776	-	84	85.762	ENSSMAG00000013826	sept3	74	85.762	Scophthalmus_maximus
ENSCAPG00000017776	-	83	88.000	ENSSDUG00000004549	sept3	73	87.213	Seriola_dumerili
ENSCAPG00000017776	-	83	88.000	ENSSLDG00000023869	sept3	73	87.213	Seriola_lalandi_dorsalis
ENSCAPG00000017776	-	96	90.423	ENSSPUG00000005948	SEPT3	99	90.423	Sphenodon_punctatus
ENSCAPG00000017776	-	100	97.500	ENSSSCG00000000040	SEPT3	100	97.500	Sus_scrofa
ENSCAPG00000017776	-	81	98.630	ENSTGUG00000009729	SEPT3	100	98.630	Taeniopygia_guttata
ENSCAPG00000017776	-	84	87.086	ENSTRUG00000000028	sept3	97	81.538	Takifugu_rubripes
ENSCAPG00000017776	-	84	86.424	ENSTNIG00000004228	sept3	96	86.424	Tetraodon_nigroviridis
ENSCAPG00000017776	-	100	98.056	ENSTTRG00000017358	SEPT3	100	98.056	Tursiops_truncatus
ENSCAPG00000017776	-	100	98.056	ENSUMAG00000020618	-	99	99.310	Ursus_maritimus
ENSCAPG00000017776	-	100	98.333	ENSVVUG00000002589	-	100	98.333	Vulpes_vulpes
ENSCAPG00000017776	-	92	92.145	ENSXETG00000000261	sept3	95	92.145	Xenopus_tropicalis
ENSCAPG00000017776	-	83	87.667	ENSXCOG00000013650	sept3	72	87.417	Xiphophorus_couchianus
ENSCAPG00000017776	-	84	87.417	ENSXMAG00000017559	sept3	90	87.417	Xiphophorus_maculatus