EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000017934 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 10953 bases
Position: chrAVPZ01000900.1:777437-788389
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000018577	Utp12	PF04003.12	7e-22	1	1
ENSCAPP00000018575	Utp12	PF04003.12	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000022385	-	2742	-	ENSCAPP00000018575	913 (aa)	-	-
ENSCAPT00000022387	-	2751	-	ENSCAPP00000018577	917 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017934's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017934	-	100	88.453	ENSG00000241945	PWP2	99	89.145	Homo_sapiens
ENSCAPG00000017934	-	96	71.331	ENSAPOG00000021522	pwp2h	98	70.773	Acanthochromis_polyacanthus
ENSCAPG00000017934	-	99	87.403	ENSAMEG00000010907	-	99	86.608	Ailuropoda_melanoleuca
ENSCAPG00000017934	-	96	72.222	ENSACIG00000024109	pwp2h	99	70.929	Amphilophus_citrinellus
ENSCAPG00000017934	-	96	71.672	ENSAOCG00000014853	pwp2h	99	71.205	Amphiprion_ocellaris
ENSCAPG00000017934	-	96	71.445	ENSAPEG00000008152	pwp2h	99	70.419	Amphiprion_percula
ENSCAPG00000017934	-	96	72.077	ENSATEG00000015493	pwp2h	99	72.462	Anabas_testudineus
ENSCAPG00000017934	-	97	75.819	ENSAPLG00000010371	-	98	75.083	Anas_platyrhynchos
ENSCAPG00000017934	-	100	74.646	ENSACAG00000017861	-	98	75.640	Anolis_carolinensis
ENSCAPG00000017934	-	99	88.048	ENSANAG00000034845	-	99	88.268	Aotus_nancymaae
ENSCAPG00000017934	-	96	71.525	ENSACLG00000011425	pwp2h	99	70.273	Astatotilapia_calliptera
ENSCAPG00000017934	-	98	68.962	ENSAMXG00000007988	pwp2h	99	68.039	Astyanax_mexicanus
ENSCAPG00000017934	-	99	88.619	ENSBTAG00000007105	-	98	88.398	Bos_taurus
ENSCAPG00000017934	-	95	38.063	WBGene00018891	F55F8.3	99	37.299	Caenorhabditis_elegans
ENSCAPG00000017934	-	100	87.677	ENSCJAG00000005570	-	99	87.719	Callithrix_jacchus
ENSCAPG00000017934	-	98	88.183	ENSCAFG00000010687	-	99	87.859	Canis_familiaris
ENSCAPG00000017934	-	82	87.316	ENSCAFG00020019199	-	90	86.939	Canis_lupus_dingo
ENSCAPG00000017934	-	99	83.736	ENSCHIG00000026362	-	98	84.176	Capra_hircus
ENSCAPG00000017934	-	100	88.562	ENSTSYG00000009022	-	99	88.719	Carlito_syrichta
ENSCAPG00000017934	-	100	99.782	ENSCPOG00000023616	-	99	99.782	Cavia_porcellus
ENSCAPG00000017934	-	100	88.441	ENSCCAG00000034616	-	99	88.706	Cebus_capucinus
ENSCAPG00000017934	-	100	88.998	ENSCATG00000032550	-	99	89.693	Cercocebus_atys
ENSCAPG00000017934	-	99	95.022	ENSCLAG00000009503	-	99	95.022	Chinchilla_lanigera
ENSCAPG00000017934	-	100	88.453	ENSCSAG00000007903	-	99	89.047	Chlorocebus_sabaeus
ENSCAPG00000017934	-	96	78.157	ENSCPBG00000018335	-	98	76.897	Chrysemys_picta_bellii
ENSCAPG00000017934	-	98	55.741	ENSCSAVG00000004186	-	99	55.902	Ciona_savignyi
ENSCAPG00000017934	-	100	89.313	ENSCANG00000028013	-	99	89.791	Colobus_angolensis_palliatus
ENSCAPG00000017934	-	99	89.890	ENSCGRG00001020074	Pwp2	99	89.923	Cricetulus_griseus_chok1gshd
ENSCAPG00000017934	-	99	89.890	ENSCGRG00000003750	Pwp2	99	89.923	Cricetulus_griseus_crigri
ENSCAPG00000017934	-	96	71.754	ENSCSEG00000000861	pwp2h	98	70.713	Cynoglossus_semilaevis
ENSCAPG00000017934	-	96	71.754	ENSCVAG00000000996	pwp2h	99	70.778	Cyprinodon_variegatus
ENSCAPG00000017934	-	98	67.182	ENSDARG00000037109	pwp2h	98	66.157	Danio_rerio
ENSCAPG00000017934	-	87	84.962	ENSDNOG00000012128	-	99	85.227	Dasypus_novemcinctus
ENSCAPG00000017934	-	96	85.223	ENSDORG00000003015	Pwp2	95	85.223	Dipodomys_ordii
ENSCAPG00000017934	-	99	45.591	FBgn0033557	CG12325	97	45.503	Drosophila_melanogaster
ENSCAPG00000017934	-	85	64.615	ENSEBUG00000003140	pwp2h	97	63.375	Eptatretus_burgeri
ENSCAPG00000017934	-	97	90.315	ENSEASG00005001651	-	99	89.083	Equus_asinus_asinus
ENSCAPG00000017934	-	97	90.428	ENSECAG00000006090	-	99	89.301	Equus_caballus
ENSCAPG00000017934	-	98	70.243	ENSELUG00000001878	pwp2h	98	70.144	Esox_lucius
ENSCAPG00000017934	-	99	86.454	ENSFCAG00000004487	-	99	86.674	Felis_catus
ENSCAPG00000017934	-	99	74.889	ENSFALG00000012300	-	99	74.556	Ficedula_albicollis
ENSCAPG00000017934	-	99	93.459	ENSFDAG00000016140	-	99	93.172	Fukomys_damarensis
ENSCAPG00000017934	-	94	72.196	ENSFHEG00000009078	pwp2h	99	72.196	Fundulus_heteroclitus
ENSCAPG00000017934	-	96	70.729	ENSGMOG00000016522	pwp2h	98	69.778	Gadus_morhua
ENSCAPG00000017934	-	98	75.754	ENSGALG00000045726	-	98	75.754	Gallus_gallus
ENSCAPG00000017934	-	99	70.549	ENSGAFG00000011340	pwp2h	99	70.549	Gambusia_affinis
ENSCAPG00000017934	-	96	71.185	ENSGACG00000014928	pwp2h	99	70.361	Gasterosteus_aculeatus
ENSCAPG00000017934	-	99	77.162	ENSGAGG00000005377	-	99	76.889	Gopherus_agassizii
ENSCAPG00000017934	-	100	88.357	ENSGGOG00000041875	-	99	89.047	Gorilla_gorilla
ENSCAPG00000017934	-	96	71.751	ENSHBUG00000005530	pwp2h	99	70.492	Haplochromis_burtoni
ENSCAPG00000017934	-	100	90.731	ENSHGLG00000017401	-	99	90.979	Heterocephalus_glaber_female
ENSCAPG00000017934	-	100	90.294	ENSHGLG00100013888	-	99	90.539	Heterocephalus_glaber_male
ENSCAPG00000017934	-	97	68.391	ENSHCOG00000018121	pwp2h	97	68.182	Hippocampus_comes
ENSCAPG00000017934	-	99	68.108	ENSIPUG00000014074	pwp2h	99	68.484	Ictalurus_punctatus
ENSCAPG00000017934	-	99	90.608	ENSSTOG00000014194	-	98	90.829	Ictidomys_tridecemlineatus
ENSCAPG00000017934	-	99	90.769	ENSJJAG00000013039	Pwp2	99	90.879	Jaculus_jaculus
ENSCAPG00000017934	-	96	71.542	ENSKMAG00000003143	pwp2h	99	70.199	Kryptolebias_marmoratus
ENSCAPG00000017934	-	96	70.762	ENSLBEG00000006388	pwp2h	99	69.306	Labrus_bergylta
ENSCAPG00000017934	-	94	71.297	ENSLACG00000006084	pwp2h	99	71.313	Latimeria_chalumnae
ENSCAPG00000017934	-	99	69.660	ENSLOCG00000003663	pwp2h	98	69.113	Lepisosteus_oculatus
ENSCAPG00000017934	-	94	89.240	ENSLAFG00000003871	-	99	89.123	Loxodonta_africana
ENSCAPG00000017934	-	100	88.671	ENSMFAG00000044448	-	99	89.364	Macaca_fascicularis
ENSCAPG00000017934	-	100	88.671	ENSMMUG00000005271	PWP2	99	89.364	Macaca_mulatta
ENSCAPG00000017934	-	100	88.671	ENSMNEG00000030782	-	99	89.364	Macaca_nemestrina
ENSCAPG00000017934	-	100	88.780	ENSMLEG00000039860	-	99	89.474	Mandrillus_leucophaeus
ENSCAPG00000017934	-	96	72.241	ENSMAMG00000022327	pwp2h	99	71.084	Mastacembelus_armatus
ENSCAPG00000017934	-	96	70.582	ENSMZEG00005015448	pwp2h	99	70.164	Maylandia_zebra
ENSCAPG00000017934	-	99	67.908	ENSMGAG00000014596	-	98	67.806	Meleagris_gallopavo
ENSCAPG00000017934	-	92	64.019	ENSMAUG00000020265	Pwp2	94	64.252	Mesocricetus_auratus
ENSCAPG00000017934	-	100	88.780	ENSMICG00000001002	-	99	88.925	Microcebus_murinus
ENSCAPG00000017934	-	100	89.577	ENSMOCG00000003844	Pwp2	99	90.284	Microtus_ochrogaster
ENSCAPG00000017934	-	96	70.341	ENSMMOG00000000882	pwp2h	99	70.341	Mola_mola
ENSCAPG00000017934	-	99	81.567	ENSMODG00000021081	-	99	81.347	Monodelphis_domestica
ENSCAPG00000017934	-	99	71.460	ENSMALG00000000821	pwp2h	99	71.240	Monopterus_albus
ENSCAPG00000017934	-	100	89.204	MGP_CAROLIEiJ_G0015505	Pwp2	99	89.682	Mus_caroli
ENSCAPG00000017934	-	100	88.889	ENSMUSG00000032834	Pwp2	99	89.583	Mus_musculus
ENSCAPG00000017934	-	100	88.780	MGP_PahariEiJ_G0030918	Pwp2	99	89.254	Mus_pahari
ENSCAPG00000017934	-	100	88.998	MGP_SPRETEiJ_G0016318	Pwp2	99	89.474	Mus_spretus
ENSCAPG00000017934	-	87	86.129	ENSMPUG00000009936	-	99	86.129	Mustela_putorius_furo
ENSCAPG00000017934	-	98	83.482	ENSMLUG00000004823	-	99	83.058	Myotis_lucifugus
ENSCAPG00000017934	-	99	90.769	ENSNGAG00000021106	Pwp2	99	90.440	Nannospalax_galili
ENSCAPG00000017934	-	99	69.313	ENSNBRG00000016527	pwp2h	99	69.355	Neolamprologus_brichardi
ENSCAPG00000017934	-	96	89.989	ENSNLEG00000001928	-	99	90.216	Nomascus_leucogenys
ENSCAPG00000017934	-	99	94.358	ENSODEG00000013073	-	99	94.912	Octodon_degus
ENSCAPG00000017934	-	96	71.525	ENSONIG00000007136	pwp2h	99	70.273	Oreochromis_niloticus
ENSCAPG00000017934	-	98	78.556	ENSOANG00000006477	-	99	78.266	Ornithorhynchus_anatinus
ENSCAPG00000017934	-	99	70.419	ENSORLG00000000066	pwp2h	99	70.419	Oryzias_latipes
ENSCAPG00000017934	-	99	70.640	ENSORLG00020000321	pwp2h	99	70.640	Oryzias_latipes_hni
ENSCAPG00000017934	-	99	66.556	ENSORLG00015014731	pwp2h	99	66.556	Oryzias_latipes_hsok
ENSCAPG00000017934	-	98	56.439	ENSOMEG00000020671	pwp2h	99	56.439	Oryzias_melastigma
ENSCAPG00000017934	-	96	91.136	ENSOGAG00000012473	-	99	89.911	Otolemur_garnettii
ENSCAPG00000017934	-	99	86.108	ENSOARG00000011672	-	99	88.228	Ovis_aries
ENSCAPG00000017934	-	96	90.557	ENSPPAG00000037874	-	99	89.035	Pan_paniscus
ENSCAPG00000017934	-	100	86.260	ENSPPRG00000011088	-	99	86.623	Panthera_pardus
ENSCAPG00000017934	-	100	78.758	ENSPTIG00000020872	-	99	79.080	Panthera_tigris_altaica
ENSCAPG00000017934	-	100	88.453	ENSPTRG00000013969	-	99	89.145	Pan_troglodytes
ENSCAPG00000017934	-	100	88.671	ENSPANG00000006267	-	99	89.352	Papio_anubis
ENSCAPG00000017934	-	98	69.188	ENSPKIG00000002693	pwp2h	99	72.216	Paramormyrops_kingsleyae
ENSCAPG00000017934	-	96	78.157	ENSPSIG00000009783	-	99	76.726	Pelodiscus_sinensis
ENSCAPG00000017934	-	96	71.672	ENSPMGG00000022349	pwp2h	99	70.472	Periophthalmus_magnuspinnatus
ENSCAPG00000017934	-	96	92.072	ENSPEMG00000009968	Pwp2	99	90.601	Peromyscus_maniculatus_bairdii
ENSCAPG00000017934	-	99	81.326	ENSPCIG00000014548	-	99	81.105	Phascolarctos_cinereus
ENSCAPG00000017934	-	99	70.549	ENSPFOG00000014764	pwp2h	99	70.330	Poecilia_formosa
ENSCAPG00000017934	-	99	70.440	ENSPLAG00000011559	pwp2h	99	70.440	Poecilia_latipinna
ENSCAPG00000017934	-	99	70.659	ENSPMEG00000021347	pwp2h	99	70.440	Poecilia_mexicana
ENSCAPG00000017934	-	99	70.847	ENSPREG00000015887	pwp2h	99	70.659	Poecilia_reticulata
ENSCAPG00000017934	-	100	89.313	ENSPPYG00000011478	-	99	89.572	Pongo_abelii
ENSCAPG00000017934	-	99	82.346	ENSPCAG00000004676	-	99	82.346	Procavia_capensis
ENSCAPG00000017934	-	99	89.823	ENSPCOG00000012856	-	98	89.712	Propithecus_coquereli
ENSCAPG00000017934	-	100	80.262	ENSPVAG00000002312	-	99	80.571	Pteropus_vampyrus
ENSCAPG00000017934	-	75	69.666	ENSPNYG00000008379	pwp2h	99	68.150	Pundamilia_nyererei
ENSCAPG00000017934	-	96	69.516	ENSPNAG00000017876	pwp2h	99	68.370	Pygocentrus_nattereri
ENSCAPG00000017934	-	99	89.648	ENSRNOG00000001210	Pwp2	99	89.606	Rattus_norvegicus
ENSCAPG00000017934	-	100	88.986	ENSRBIG00000034365	-	99	89.462	Rhinopithecus_bieti
ENSCAPG00000017934	-	100	89.095	ENSRROG00000031946	-	99	89.572	Rhinopithecus_roxellana
ENSCAPG00000017934	-	95	44.710	YCR057C	PWP2	96	43.511	Saccharomyces_cerevisiae
ENSCAPG00000017934	-	100	88.441	ENSSBOG00000034554	-	99	88.550	Saimiri_boliviensis_boliviensis
ENSCAPG00000017934	-	99	70.562	ENSSFOG00015003316	pwp2	99	70.120	Scleropages_formosus
ENSCAPG00000017934	-	96	72.520	ENSSMAG00000011839	pwp2h	99	70.865	Scophthalmus_maximus
ENSCAPG00000017934	-	96	72.862	ENSSDUG00000011462	pwp2h	99	71.007	Seriola_dumerili
ENSCAPG00000017934	-	96	72.437	ENSSLDG00000008651	pwp2h	98	70.925	Seriola_lalandi_dorsalis
ENSCAPG00000017934	-	97	77.329	ENSSPUG00000002980	-	99	77.329	Sphenodon_punctatus
ENSCAPG00000017934	-	96	71.655	ENSSPAG00000023368	pwp2h	99	70.783	Stegastes_partitus
ENSCAPG00000017934	-	99	86.799	ENSSSCG00000029627	-	98	86.799	Sus_scrofa
ENSCAPG00000017934	-	61	71.071	ENSTGUG00000018216	-	100	71.071	Taeniopygia_guttata
ENSCAPG00000017934	-	96	75.485	ENSTGUG00000005996	-	99	75.257	Taeniopygia_guttata
ENSCAPG00000017934	-	99	70.220	ENSTRUG00000013258	pwp2h	99	70.510	Takifugu_rubripes
ENSCAPG00000017934	-	98	69.866	ENSTNIG00000010613	pwp2h	99	69.308	Tetraodon_nigroviridis
ENSCAPG00000017934	-	83	91.667	ENSTBEG00000015597	-	90	91.667	Tupaia_belangeri
ENSCAPG00000017934	-	94	88.525	ENSTTRG00000006728	-	99	88.173	Tursiops_truncatus
ENSCAPG00000017934	-	100	86.304	ENSUAMG00000019031	-	99	87.097	Ursus_americanus
ENSCAPG00000017934	-	100	83.587	ENSUMAG00000025481	-	99	84.245	Ursus_maritimus
ENSCAPG00000017934	-	99	88.066	ENSVVUG00000024125	-	99	87.541	Vulpes_vulpes
ENSCAPG00000017934	-	68	59.884	ENSXETG00000018002	pwp2	89	59.302	Xenopus_tropicalis
ENSCAPG00000017934	-	99	66.923	ENSXCOG00000020474	pwp2h	99	66.594	Xiphophorus_couchianus
ENSCAPG00000017934	-	99	70.627	ENSXMAG00000008124	pwp2h	99	70.395	Xiphophorus_maculatus