EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000017958 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC4
Alias: FLJ20591|RRP41|RRP41A|Rrp41p|SKI6|Ski6p|hRrp41p|p12A
Full Name: exosome component 4
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 869 bases
Position: chrAVPZ01000955.1:3203788-3204656
Accession: 18189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000018602	RNase_PH	PF01138.21	7.5e-19	1	1
ENSCAPP00000018602	RNase_PH_C	PF03725.15	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000022413	EXOSC4-201	660	-	ENSCAPP00000018602	219 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017958	EXOSC4	86	98.404	ENSG00000178896	EXOSC4	77	98.404	Homo_sapiens
ENSCAPG00000017958	EXOSC4	86	69.681	ENSAPOG00000000255	exosc4	77	69.681	Acanthochromis_polyacanthus
ENSCAPG00000017958	EXOSC4	86	96.277	ENSAMEG00000006093	EXOSC4	77	96.277	Ailuropoda_melanoleuca
ENSCAPG00000017958	EXOSC4	86	70.213	ENSACIG00000017924	exosc4	77	70.213	Amphilophus_citrinellus
ENSCAPG00000017958	EXOSC4	86	70.213	ENSAOCG00000005105	exosc4	77	70.213	Amphiprion_ocellaris
ENSCAPG00000017958	EXOSC4	86	70.213	ENSAPEG00000003972	exosc4	77	70.213	Amphiprion_percula
ENSCAPG00000017958	EXOSC4	86	70.745	ENSATEG00000007766	exosc4	77	70.745	Anabas_testudineus
ENSCAPG00000017958	EXOSC4	85	72.340	ENSACAG00000004017	EXOSC4	98	72.340	Anolis_carolinensis
ENSCAPG00000017958	EXOSC4	86	98.404	ENSANAG00000026123	EXOSC4	77	98.404	Aotus_nancymaae
ENSCAPG00000017958	EXOSC4	74	31.977	ENSACLG00000022304	exosc6	61	31.977	Astatotilapia_calliptera
ENSCAPG00000017958	EXOSC4	86	70.213	ENSACLG00000020071	exosc4	77	70.213	Astatotilapia_calliptera
ENSCAPG00000017958	EXOSC4	84	69.565	ENSAMXG00000030867	exosc4	75	69.565	Astyanax_mexicanus
ENSCAPG00000017958	EXOSC4	56	32.520	ENSBTAG00000016034	EXOSC5	52	32.520	Bos_taurus
ENSCAPG00000017958	EXOSC4	86	95.745	ENSBTAG00000014607	EXOSC4	77	95.745	Bos_taurus
ENSCAPG00000017958	EXOSC4	85	43.011	WBGene00007201	exos-4.1	78	43.011	Caenorhabditis_elegans
ENSCAPG00000017958	EXOSC4	86	97.340	ENSCJAG00000021458	EXOSC4	77	97.340	Callithrix_jacchus
ENSCAPG00000017958	EXOSC4	86	96.277	ENSCAFG00000001521	EXOSC4	77	96.277	Canis_familiaris
ENSCAPG00000017958	EXOSC4	86	96.277	ENSCAFG00020018820	EXOSC4	77	96.277	Canis_lupus_dingo
ENSCAPG00000017958	EXOSC4	86	95.213	ENSCHIG00000021121	EXOSC4	77	95.213	Capra_hircus
ENSCAPG00000017958	EXOSC4	56	32.520	ENSCHIG00000026498	EXOSC5	52	32.520	Capra_hircus
ENSCAPG00000017958	EXOSC4	86	97.340	ENSTSYG00000029697	EXOSC4	77	97.340	Carlito_syrichta
ENSCAPG00000017958	EXOSC4	56	32.520	ENSCPOG00000035731	EXOSC5	51	32.520	Cavia_porcellus
ENSCAPG00000017958	EXOSC4	86	100.000	ENSCPOG00000022671	EXOSC4	77	100.000	Cavia_porcellus
ENSCAPG00000017958	EXOSC4	54	33.333	ENSCCAG00000013179	EXOSC5	60	33.333	Cebus_capucinus
ENSCAPG00000017958	EXOSC4	86	98.404	ENSCCAG00000025515	EXOSC4	91	98.404	Cebus_capucinus
ENSCAPG00000017958	EXOSC4	86	98.404	ENSCATG00000029965	EXOSC4	77	98.404	Cercocebus_atys
ENSCAPG00000017958	EXOSC4	86	98.404	ENSCLAG00000014676	EXOSC4	77	98.404	Chinchilla_lanigera
ENSCAPG00000017958	EXOSC4	56	31.707	ENSCLAG00000001186	EXOSC5	52	31.707	Chinchilla_lanigera
ENSCAPG00000017958	EXOSC4	86	98.404	ENSCSAG00000008802	EXOSC4	77	98.404	Chlorocebus_sabaeus
ENSCAPG00000017958	EXOSC4	54	33.613	ENSCHOG00000000047	EXOSC5	50	33.613	Choloepus_hoffmanni
ENSCAPG00000017958	EXOSC4	86	76.596	ENSCPBG00000018860	EXOSC4	77	76.596	Chrysemys_picta_bellii
ENSCAPG00000017958	EXOSC4	80	48.864	ENSCING00000009562	-	71	48.864	Ciona_intestinalis
ENSCAPG00000017958	EXOSC4	85	48.387	ENSCSAVG00000008006	-	75	48.387	Ciona_savignyi
ENSCAPG00000017958	EXOSC4	86	98.404	ENSCANG00000035733	EXOSC4	77	98.404	Colobus_angolensis_palliatus
ENSCAPG00000017958	EXOSC4	86	96.809	ENSCGRG00001020452	Exosc4	77	96.809	Cricetulus_griseus_chok1gshd
ENSCAPG00000017958	EXOSC4	86	96.809	ENSCGRG00000016505	Exosc4	77	96.809	Cricetulus_griseus_crigri
ENSCAPG00000017958	EXOSC4	86	69.149	ENSCSEG00000010906	exosc4	77	69.149	Cynoglossus_semilaevis
ENSCAPG00000017958	EXOSC4	84	71.196	ENSCVAG00000006625	exosc4	75	71.196	Cyprinodon_variegatus
ENSCAPG00000017958	EXOSC4	84	71.585	ENSDARG00000103432	exosc4	76	71.585	Danio_rerio
ENSCAPG00000017958	EXOSC4	86	95.213	ENSDNOG00000009800	EXOSC4	77	95.213	Dasypus_novemcinctus
ENSCAPG00000017958	EXOSC4	86	95.745	ENSDORG00000008461	Exosc4	77	95.745	Dipodomys_ordii
ENSCAPG00000017958	EXOSC4	76	51.786	FBgn0032487	Ski6	68	51.786	Drosophila_melanogaster
ENSCAPG00000017958	EXOSC4	84	66.667	ENSEBUG00000014277	exosc4	75	66.667	Eptatretus_burgeri
ENSCAPG00000017958	EXOSC4	86	96.809	ENSEASG00005010166	EXOSC4	77	96.809	Equus_asinus_asinus
ENSCAPG00000017958	EXOSC4	86	96.809	ENSECAG00000013658	EXOSC4	77	96.809	Equus_caballus
ENSCAPG00000017958	EXOSC4	86	70.213	ENSELUG00000021011	exosc4	77	70.213	Esox_lucius
ENSCAPG00000017958	EXOSC4	73	30.357	ENSELUG00000015515	exosc6	60	30.357	Esox_lucius
ENSCAPG00000017958	EXOSC4	86	96.809	ENSFCAG00000034465	EXOSC4	77	96.809	Felis_catus
ENSCAPG00000017958	EXOSC4	86	97.872	ENSFDAG00000006708	EXOSC4	77	97.872	Fukomys_damarensis
ENSCAPG00000017958	EXOSC4	56	33.333	ENSFDAG00000001207	EXOSC5	52	33.333	Fukomys_damarensis
ENSCAPG00000017958	EXOSC4	84	71.196	ENSFHEG00000013533	exosc4	75	71.196	Fundulus_heteroclitus
ENSCAPG00000017958	EXOSC4	86	68.085	ENSGMOG00000002113	exosc4	75	68.085	Gadus_morhua
ENSCAPG00000017958	EXOSC4	84	70.270	ENSGAFG00000021407	exosc4	76	70.270	Gambusia_affinis
ENSCAPG00000017958	EXOSC4	55	33.594	ENSGAFG00000015179	exosc6	50	33.333	Gambusia_affinis
ENSCAPG00000017958	EXOSC4	74	30.409	ENSGACG00000002690	exosc6	61	30.409	Gasterosteus_aculeatus
ENSCAPG00000017958	EXOSC4	86	68.085	ENSGACG00000017838	exosc4	75	68.085	Gasterosteus_aculeatus
ENSCAPG00000017958	EXOSC4	86	98.404	ENSGGOG00000044212	-	77	98.404	Gorilla_gorilla
ENSCAPG00000017958	EXOSC4	86	98.404	ENSGGOG00000040193	-	77	98.404	Gorilla_gorilla
ENSCAPG00000017958	EXOSC4	74	31.977	ENSHBUG00000011123	exosc6	61	31.977	Haplochromis_burtoni
ENSCAPG00000017958	EXOSC4	86	70.213	ENSHBUG00000006605	exosc4	77	70.213	Haplochromis_burtoni
ENSCAPG00000017958	EXOSC4	56	32.520	ENSHGLG00000008975	EXOSC5	52	32.520	Heterocephalus_glaber_female
ENSCAPG00000017958	EXOSC4	86	98.404	ENSHGLG00000016299	EXOSC4	77	98.404	Heterocephalus_glaber_female
ENSCAPG00000017958	EXOSC4	56	31.707	ENSHGLG00100016097	EXOSC5	52	31.707	Heterocephalus_glaber_male
ENSCAPG00000017958	EXOSC4	86	98.404	ENSHGLG00100018786	EXOSC4	77	98.404	Heterocephalus_glaber_male
ENSCAPG00000017958	EXOSC4	86	67.553	ENSHCOG00000018875	exosc4	73	67.553	Hippocampus_comes
ENSCAPG00000017958	EXOSC4	84	68.478	ENSIPUG00000011922	Exosc4	75	68.478	Ictalurus_punctatus
ENSCAPG00000017958	EXOSC4	86	96.809	ENSSTOG00000002632	EXOSC4	76	96.809	Ictidomys_tridecemlineatus
ENSCAPG00000017958	EXOSC4	86	98.404	ENSJJAG00000009655	Exosc4	77	98.404	Jaculus_jaculus
ENSCAPG00000017958	EXOSC4	84	70.811	ENSKMAG00000015373	exosc4	76	70.811	Kryptolebias_marmoratus
ENSCAPG00000017958	EXOSC4	74	30.488	ENSKMAG00000009821	exosc6	61	30.488	Kryptolebias_marmoratus
ENSCAPG00000017958	EXOSC4	86	68.617	ENSLBEG00000012754	exosc4	77	68.617	Labrus_bergylta
ENSCAPG00000017958	EXOSC4	84	69.730	ENSLOCG00000008878	exosc4	75	69.730	Lepisosteus_oculatus
ENSCAPG00000017958	EXOSC4	86	96.809	ENSLAFG00000030187	EXOSC4	77	96.809	Loxodonta_africana
ENSCAPG00000017958	EXOSC4	86	98.404	ENSMFAG00000000161	EXOSC4	77	98.404	Macaca_fascicularis
ENSCAPG00000017958	EXOSC4	86	98.404	ENSMMUG00000007160	EXOSC4	77	98.404	Macaca_mulatta
ENSCAPG00000017958	EXOSC4	86	98.404	ENSMNEG00000033938	EXOSC4	77	98.404	Macaca_nemestrina
ENSCAPG00000017958	EXOSC4	86	98.404	ENSMLEG00000041197	EXOSC4	77	98.404	Mandrillus_leucophaeus
ENSCAPG00000017958	EXOSC4	60	34.532	ENSMAMG00000016983	exosc6	55	34.532	Mastacembelus_armatus
ENSCAPG00000017958	EXOSC4	86	69.681	ENSMAMG00000014749	exosc4	77	69.681	Mastacembelus_armatus
ENSCAPG00000017958	EXOSC4	74	31.977	ENSMZEG00005010720	exosc6	61	31.977	Maylandia_zebra
ENSCAPG00000017958	EXOSC4	86	70.213	ENSMZEG00005025086	exosc4	77	70.213	Maylandia_zebra
ENSCAPG00000017958	EXOSC4	86	96.277	ENSMAUG00000007911	Exosc4	77	96.277	Mesocricetus_auratus
ENSCAPG00000017958	EXOSC4	56	32.520	ENSMICG00000002016	EXOSC5	62	32.520	Microcebus_murinus
ENSCAPG00000017958	EXOSC4	86	97.340	ENSMOCG00000020295	Exosc4	77	97.340	Microtus_ochrogaster
ENSCAPG00000017958	EXOSC4	84	69.189	ENSMMOG00000016779	exosc4	76	69.189	Mola_mola
ENSCAPG00000017958	EXOSC4	71	93.590	ENSMODG00000010435	EXOSC4	73	93.590	Monodelphis_domestica
ENSCAPG00000017958	EXOSC4	86	69.149	ENSMALG00000020564	exosc4	77	69.149	Monopterus_albus
ENSCAPG00000017958	EXOSC4	86	95.213	MGP_CAROLIEiJ_G0019919	Exosc4	77	95.213	Mus_caroli
ENSCAPG00000017958	EXOSC4	86	95.213	ENSMUSG00000034259	Exosc4	77	95.213	Mus_musculus
ENSCAPG00000017958	EXOSC4	86	96.277	MGP_PahariEiJ_G0019929	Exosc4	77	96.277	Mus_pahari
ENSCAPG00000017958	EXOSC4	86	95.213	MGP_SPRETEiJ_G0020822	Exosc4	77	95.213	Mus_spretus
ENSCAPG00000017958	EXOSC4	86	96.277	ENSMPUG00000007260	EXOSC4	94	96.277	Mustela_putorius_furo
ENSCAPG00000017958	EXOSC4	86	96.809	ENSNGAG00000022428	Exosc4	77	96.809	Nannospalax_galili
ENSCAPG00000017958	EXOSC4	86	70.213	ENSNBRG00000012326	exosc4	77	70.213	Neolamprologus_brichardi
ENSCAPG00000017958	EXOSC4	74	32.558	ENSNBRG00000007400	exosc6	61	32.558	Neolamprologus_brichardi
ENSCAPG00000017958	EXOSC4	86	98.404	ENSNLEG00000010449	EXOSC4	77	98.404	Nomascus_leucogenys
ENSCAPG00000017958	EXOSC4	86	92.553	ENSMEUG00000011002	EXOSC4	77	92.553	Notamacropus_eugenii
ENSCAPG00000017958	EXOSC4	86	93.085	ENSOPRG00000016625	EXOSC4	100	93.085	Ochotona_princeps
ENSCAPG00000017958	EXOSC4	86	98.936	ENSODEG00000013951	EXOSC4	77	98.936	Octodon_degus
ENSCAPG00000017958	EXOSC4	86	70.213	ENSONIG00000009617	exosc4	77	70.213	Oreochromis_niloticus
ENSCAPG00000017958	EXOSC4	74	32.558	ENSONIG00000011184	exosc6	59	32.558	Oreochromis_niloticus
ENSCAPG00000017958	EXOSC4	86	80.851	ENSOANG00000014904	EXOSC4	77	80.851	Ornithorhynchus_anatinus
ENSCAPG00000017958	EXOSC4	86	95.745	ENSOCUG00000021243	EXOSC4	77	95.745	Oryctolagus_cuniculus
ENSCAPG00000017958	EXOSC4	84	70.270	ENSORLG00000017295	exosc4	76	70.270	Oryzias_latipes
ENSCAPG00000017958	EXOSC4	84	70.270	ENSORLG00020009788	exosc4	76	70.270	Oryzias_latipes_hni
ENSCAPG00000017958	EXOSC4	84	70.270	ENSORLG00015009754	exosc4	76	70.270	Oryzias_latipes_hsok
ENSCAPG00000017958	EXOSC4	84	70.811	ENSOMEG00000005800	exosc4	76	70.811	Oryzias_melastigma
ENSCAPG00000017958	EXOSC4	86	97.872	ENSOGAG00000007411	EXOSC4	77	97.872	Otolemur_garnettii
ENSCAPG00000017958	EXOSC4	56	32.520	ENSOARG00000007412	EXOSC5	52	32.520	Ovis_aries
ENSCAPG00000017958	EXOSC4	86	95.213	ENSOARG00000015188	EXOSC4	76	95.213	Ovis_aries
ENSCAPG00000017958	EXOSC4	86	98.404	ENSPPAG00000035746	EXOSC4	77	98.404	Pan_paniscus
ENSCAPG00000017958	EXOSC4	86	96.809	ENSPPRG00000019782	EXOSC4	77	96.809	Panthera_pardus
ENSCAPG00000017958	EXOSC4	86	96.809	ENSPTIG00000020006	EXOSC4	77	96.809	Panthera_tigris_altaica
ENSCAPG00000017958	EXOSC4	86	98.404	ENSPTRG00000020677	EXOSC4	77	98.404	Pan_troglodytes
ENSCAPG00000017958	EXOSC4	86	98.404	ENSPANG00000023276	EXOSC4	77	98.404	Papio_anubis
ENSCAPG00000017958	EXOSC4	86	67.553	ENSPKIG00000018362	exosc4	77	67.553	Paramormyrops_kingsleyae
ENSCAPG00000017958	EXOSC4	86	70.745	ENSPMGG00000019307	exosc4	77	70.745	Periophthalmus_magnuspinnatus
ENSCAPG00000017958	EXOSC4	86	96.277	ENSPEMG00000017031	Exosc4	77	96.277	Peromyscus_maniculatus_bairdii
ENSCAPG00000017958	EXOSC4	85	72.193	ENSPMAG00000001175	exosc4	76	72.193	Petromyzon_marinus
ENSCAPG00000017958	EXOSC4	86	92.553	ENSPCIG00000009102	EXOSC4	77	92.553	Phascolarctos_cinereus
ENSCAPG00000017958	EXOSC4	84	70.811	ENSPFOG00000015214	exosc4	76	70.811	Poecilia_formosa
ENSCAPG00000017958	EXOSC4	84	70.811	ENSPLAG00000018751	exosc4	76	70.811	Poecilia_latipinna
ENSCAPG00000017958	EXOSC4	84	70.811	ENSPMEG00000023116	exosc4	76	70.811	Poecilia_mexicana
ENSCAPG00000017958	EXOSC4	84	71.892	ENSPREG00000009632	exosc4	76	71.892	Poecilia_reticulata
ENSCAPG00000017958	EXOSC4	86	98.404	ENSPPYG00000018959	EXOSC4	79	98.404	Pongo_abelii
ENSCAPG00000017958	EXOSC4	60	33.582	ENSPCAG00000012874	EXOSC6	65	30.726	Procavia_capensis
ENSCAPG00000017958	EXOSC4	86	95.745	ENSPCAG00000014920	EXOSC4	77	95.745	Procavia_capensis
ENSCAPG00000017958	EXOSC4	86	97.340	ENSPCOG00000020992	EXOSC4	77	97.340	Propithecus_coquereli
ENSCAPG00000017958	EXOSC4	86	97.340	ENSPVAG00000007100	EXOSC4	77	97.340	Pteropus_vampyrus
ENSCAPG00000017958	EXOSC4	74	32.558	ENSPNYG00000010784	exosc6	61	32.558	Pundamilia_nyererei
ENSCAPG00000017958	EXOSC4	86	70.213	ENSPNYG00000014429	exosc4	77	70.213	Pundamilia_nyererei
ENSCAPG00000017958	EXOSC4	96	63.507	ENSPNAG00000013750	exosc4	92	63.507	Pygocentrus_nattereri
ENSCAPG00000017958	EXOSC4	86	97.340	ENSRNOG00000012348	Exosc4	77	97.340	Rattus_norvegicus
ENSCAPG00000017958	EXOSC4	86	98.404	ENSRBIG00000038476	EXOSC4	77	98.404	Rhinopithecus_bieti
ENSCAPG00000017958	EXOSC4	86	98.404	ENSRROG00000038556	EXOSC4	77	98.404	Rhinopithecus_roxellana
ENSCAPG00000017958	EXOSC4	78	33.333	YGR195W	SKI6	69	33.333	Saccharomyces_cerevisiae
ENSCAPG00000017958	EXOSC4	86	93.085	ENSSHAG00000005397	EXOSC4	77	93.085	Sarcophilus_harrisii
ENSCAPG00000017958	EXOSC4	86	70.745	ENSSFOG00015004133	exosc4	77	70.745	Scleropages_formosus
ENSCAPG00000017958	EXOSC4	86	70.745	ENSSMAG00000020020	exosc4	77	70.745	Scophthalmus_maximus
ENSCAPG00000017958	EXOSC4	86	69.681	ENSSDUG00000018966	exosc4	77	69.681	Seriola_dumerili
ENSCAPG00000017958	EXOSC4	94	65.854	ENSSLDG00000006678	-	100	65.854	Seriola_lalandi_dorsalis
ENSCAPG00000017958	EXOSC4	86	69.681	ENSSLDG00000008003	exosc4	77	69.681	Seriola_lalandi_dorsalis
ENSCAPG00000017958	EXOSC4	74	30.409	ENSSLDG00000017776	exosc6	60	30.409	Seriola_lalandi_dorsalis
ENSCAPG00000017958	EXOSC4	86	75.532	ENSSPUG00000009644	EXOSC4	93	75.532	Sphenodon_punctatus
ENSCAPG00000017958	EXOSC4	86	69.681	ENSSPAG00000016707	exosc4	71	69.681	Stegastes_partitus
ENSCAPG00000017958	EXOSC4	86	96.277	ENSSSCG00000005925	EXOSC4	77	96.277	Sus_scrofa
ENSCAPG00000017958	EXOSC4	86	68.085	ENSTRUG00000025054	exosc4	77	68.085	Takifugu_rubripes
ENSCAPG00000017958	EXOSC4	74	31.098	ENSTNIG00000004018	exosc6	63	31.098	Tetraodon_nigroviridis
ENSCAPG00000017958	EXOSC4	86	68.085	ENSTNIG00000008519	exosc4	77	68.085	Tetraodon_nigroviridis
ENSCAPG00000017958	EXOSC4	86	94.149	ENSTBEG00000000727	EXOSC4	100	94.149	Tupaia_belangeri
ENSCAPG00000017958	EXOSC4	86	97.340	ENSUAMG00000020173	EXOSC4	77	97.340	Ursus_americanus
ENSCAPG00000017958	EXOSC4	67	97.279	ENSUMAG00000020831	EXOSC4	100	97.279	Ursus_maritimus
ENSCAPG00000017958	EXOSC4	86	96.277	ENSVVUG00000009675	EXOSC4	77	96.277	Vulpes_vulpes
ENSCAPG00000017958	EXOSC4	86	76.064	ENSXETG00000004668	exosc4	97	76.064	Xenopus_tropicalis
ENSCAPG00000017958	EXOSC4	84	69.730	ENSXCOG00000015017	exosc4	76	69.730	Xiphophorus_couchianus
ENSCAPG00000017958	EXOSC4	84	69.730	ENSXMAG00000016287	exosc4	76	69.730	Xiphophorus_maculatus