EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000003132 (Gene tree)
Gene ID: 105573360
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide F
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 42319 bases
Position: chrKQ011983.1:17420401-17462719
Accession: 105573360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000000642	LSM	PF01423.22	4.2e-21	1	1
ENSCATP00000000634	LSM	PF01423.22	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000003522	-	475	XM_012032825	ENSCATP00000000642	86 (aa)	XP_011888215	A0A2K5KIW6
ENSCATT00000003488	-	381	-	ENSCATP00000000634	126 (aa)	-	A0A2K5KIW1

Gene Model

Click here to download ENSCATG00000003132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000003132's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000003132	-	93	72.840	ENSCATG00000041754	-	85	70.000
ENSCATG00000003132	-	69	41.758	ENSCATG00000031850	SRSF3	96	41.758
ENSCATG00000003132	-	77	51.515	ENSCATG00000002770	-	83	51.515
ENSCATG00000003132	-	73	42.424	ENSCATG00000038799	-	86	43.077
ENSCATG00000003132	-	92	73.418	ENSCATG00000038235	-	90	72.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000003132	-	50	97.674	ENSCHIG00000017139	-	87	91.525	Capra_hircus
ENSCATG00000003132	-	50	100.000	ENSCPBG00000001948	-	94	91.837	Chrysemys_picta_bellii
ENSCATG00000003132	-	100	100.000	ENSCANG00000006758	-	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000003132	-	91	58.974	ENSFCAG00000037511	-	87	61.644	Felis_catus
ENSCATG00000003132	-	51	90.909	ENSFCAG00000032773	-	70	90.909	Felis_catus
ENSCATG00000003132	-	57	87.755	ENSGAGG00000014834	-	75	97.727	Gopherus_agassizii
ENSCATG00000003132	-	100	100.000	ENSMFAG00000035517	-	100	100.000	Macaca_fascicularis
ENSCATG00000003132	-	100	100.000	ENSMMUG00000009302	-	100	100.000	Macaca_mulatta
ENSCATG00000003132	-	100	100.000	ENSMNEG00000030762	-	100	100.000	Macaca_nemestrina
ENSCATG00000003132	-	100	100.000	ENSMLEG00000033558	-	100	100.000	Mandrillus_leucophaeus
ENSCATG00000003132	-	100	100.000	ENSNLEG00000005835	-	100	100.000	Nomascus_leucogenys
ENSCATG00000003132	-	50	97.674	ENSOGAG00000014320	-	100	96.226	Otolemur_garnettii
ENSCATG00000003132	-	100	100.000	ENSPPAG00000003072	-	100	100.000	Pan_paniscus
ENSCATG00000003132	-	73	76.190	ENSPPRG00000020147	-	100	76.190	Panthera_pardus
ENSCATG00000003132	-	100	100.000	ENSPTRG00000005317	-	100	93.701	Pan_troglodytes
ENSCATG00000003132	-	100	98.425	ENSPANG00000014632	-	100	98.425	Papio_anubis
ENSCATG00000003132	-	100	100.000	ENSPCIG00000017205	-	100	100.000	Phascolarctos_cinereus
ENSCATG00000003132	-	53	93.478	ENSPFOG00000020883	-	100	93.478	Poecilia_formosa
ENSCATG00000003132	-	100	100.000	ENSRBIG00000028811	-	100	100.000	Rhinopithecus_bieti
ENSCATG00000003132	-	100	100.000	ENSRROG00000031057	-	100	100.000	Rhinopithecus_roxellana
ENSCATG00000003132	-	64	78.182	ENSVVUG00000003155	-	73	78.182	Vulpes_vulpes