EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000008239 (Gene tree)
Gene ID: 105591003
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 59277 bases
Position: chrKQ010045.1:11645705-11704981
Accession: 105591003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000002115	ResIII	PF04851.15	1e-07	1	1
ENSCATP00000002071	ResIII	PF04851.15	1.2e-07	1	1
ENSCATP00000002068	ResIII	PF04851.15	1.2e-07	1	1
ENSCATP00000002036	ResIII	PF04851.15	1.3e-07	1	1
ENSCATP00000002052	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000010517	SBNO1-205	3762	-	ENSCATP00000002115	1253 (aa)	-	A0A2K5KN58
ENSCATT00000010268	SBNO1-202	4128	XM_012071361	ENSCATP00000002052	1375 (aa)	XP_011926751	A0A2K5KMX6
ENSCATT00000010338	SBNO1-204	4011	-	ENSCATP00000002071	1336 (aa)	-	A0A2K5KMZ7
ENSCATT00000010306	SBNO1-203	4062	-	ENSCATP00000002068	1353 (aa)	-	A0A2K5KMZ6
ENSCATT00000010170	SBNO1-201	4116	-	ENSCATP00000002036	1371 (aa)	-	A0A2K5KMW2

Gene Model

Click here to download ENSCATG00000008239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000008239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000008239	SBNO1	83	57.925	ENSCATG00000037046	SBNO2	72	68.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000008239	SBNO1	99	99.169	ENSG00000139697	SBNO1	99	97.696	Homo_sapiens
ENSCATG00000008239	SBNO1	85	83.393	ENSAPOG00000003196	sbno1	98	81.520	Acanthochromis_polyacanthus
ENSCATG00000008239	SBNO1	98	99.458	ENSAMEG00000015151	SBNO1	97	98.078	Ailuropoda_melanoleuca
ENSCATG00000008239	SBNO1	98	81.754	ENSACIG00000008088	sbno1	93	81.754	Amphilophus_citrinellus
ENSCATG00000008239	SBNO1	98	82.679	ENSAOCG00000014859	sbno1	98	74.435	Amphiprion_ocellaris
ENSCATG00000008239	SBNO1	98	82.679	ENSAPEG00000006069	sbno1	98	74.435	Amphiprion_percula
ENSCATG00000008239	SBNO1	99	84.381	ENSATEG00000006667	sbno1	91	84.381	Anabas_testudineus
ENSCATG00000008239	SBNO1	98	95.298	ENSAPLG00000015674	SBNO1	99	90.432	Anas_platyrhynchos
ENSCATG00000008239	SBNO1	98	94.245	ENSACAG00000015441	SBNO1	86	89.129	Anolis_carolinensis
ENSCATG00000008239	SBNO1	99	99.458	ENSANAG00000029958	-	99	99.458	Aotus_nancymaae
ENSCATG00000008239	SBNO1	97	77.005	ENSACLG00000024913	sbno1	97	77.063	Astatotilapia_calliptera
ENSCATG00000008239	SBNO1	98	86.847	ENSAMXG00000019473	sbno1	99	78.771	Astyanax_mexicanus
ENSCATG00000008239	SBNO1	98	98.732	ENSBTAG00000020505	SBNO1	98	97.440	Bos_taurus
ENSCATG00000008239	SBNO1	98	99.819	ENSCJAG00000016599	SBNO1	99	96.976	Callithrix_jacchus
ENSCATG00000008239	SBNO1	98	99.099	ENSCAFG00000007503	SBNO1	100	96.026	Canis_familiaris
ENSCATG00000008239	SBNO1	99	97.288	ENSCAFG00020015363	SBNO1	99	97.288	Canis_lupus_dingo
ENSCATG00000008239	SBNO1	98	98.732	ENSCHIG00000008382	SBNO1	99	98.732	Capra_hircus
ENSCATG00000008239	SBNO1	98	99.819	ENSTSYG00000012749	SBNO1	98	98.119	Carlito_syrichta
ENSCATG00000008239	SBNO1	98	99.277	ENSCAPG00000000384	SBNO1	99	99.277	Cavia_aperea
ENSCATG00000008239	SBNO1	98	99.277	ENSCPOG00000008109	SBNO1	97	99.277	Cavia_porcellus
ENSCATG00000008239	SBNO1	99	93.802	ENSCCAG00000035316	SBNO1	97	94.707	Cebus_capucinus
ENSCATG00000008239	SBNO1	98	99.277	ENSCLAG00000008995	SBNO1	97	99.277	Chinchilla_lanigera
ENSCATG00000008239	SBNO1	87	99.827	ENSCSAG00000002064	SBNO1	100	99.827	Chlorocebus_sabaeus
ENSCATG00000008239	SBNO1	94	98.529	ENSCHOG00000008814	SBNO1	93	94.283	Choloepus_hoffmanni
ENSCATG00000008239	SBNO1	98	95.144	ENSCPBG00000025968	SBNO1	97	91.460	Chrysemys_picta_bellii
ENSCATG00000008239	SBNO1	99	94.180	ENSCANG00000042688	-	99	92.451	Colobus_angolensis_palliatus
ENSCATG00000008239	SBNO1	99	97.492	ENSCGRG00001017470	Sbno1	99	98.373	Cricetulus_griseus_chok1gshd
ENSCATG00000008239	SBNO1	99	97.492	ENSCGRG00000004756	Sbno1	99	98.373	Cricetulus_griseus_crigri
ENSCATG00000008239	SBNO1	98	82.765	ENSCSEG00000011919	sbno1	91	82.765	Cynoglossus_semilaevis
ENSCATG00000008239	SBNO1	99	83.483	ENSCVAG00000007038	sbno1	91	83.483	Cyprinodon_variegatus
ENSCATG00000008239	SBNO1	98	86.438	ENSDARG00000099080	sbno1	99	78.823	Danio_rerio
ENSCATG00000008239	SBNO1	99	96.468	ENSDNOG00000017147	SBNO1	99	97.544	Dasypus_novemcinctus
ENSCATG00000008239	SBNO1	93	99.099	ENSDORG00000015261	Sbno1	97	97.207	Dipodomys_ordii
ENSCATG00000008239	SBNO1	90	100.000	ENSETEG00000005620	SBNO1	93	90.596	Echinops_telfairi
ENSCATG00000008239	SBNO1	70	86.802	ENSEBUG00000013823	sbno1	81	86.802	Eptatretus_burgeri
ENSCATG00000008239	SBNO1	51	96.057	ENSEASG00005012595	-	88	97.209	Equus_asinus_asinus
ENSCATG00000008239	SBNO1	99	98.524	ENSECAG00000006127	SBNO1	100	98.524	Equus_caballus
ENSCATG00000008239	SBNO1	82	98.352	ENSEEUG00000003793	SBNO1	81	98.352	Erinaceus_europaeus
ENSCATG00000008239	SBNO1	99	86.715	ENSELUG00000002886	sbno1	93	86.715	Esox_lucius
ENSCATG00000008239	SBNO1	98	99.457	ENSFCAG00000015331	SBNO1	99	96.470	Felis_catus
ENSCATG00000008239	SBNO1	98	95.479	ENSFALG00000009273	SBNO1	99	90.504	Ficedula_albicollis
ENSCATG00000008239	SBNO1	99	95.609	ENSFDAG00000014232	SBNO1	99	93.727	Fukomys_damarensis
ENSCATG00000008239	SBNO1	99	83.662	ENSFHEG00000007360	sbno1	91	83.662	Fundulus_heteroclitus
ENSCATG00000008239	SBNO1	98	83.696	ENSGMOG00000018229	sbno1	95	83.696	Gadus_morhua
ENSCATG00000008239	SBNO1	85	96.701	ENSGALG00000003392	SBNO1	96	92.515	Gallus_gallus
ENSCATG00000008239	SBNO1	99	83.842	ENSGAFG00000003960	sbno1	93	83.393	Gambusia_affinis
ENSCATG00000008239	SBNO1	97	84.058	ENSGACG00000015633	sbno1	94	84.058	Gasterosteus_aculeatus
ENSCATG00000008239	SBNO1	98	95.324	ENSGAGG00000001065	SBNO1	98	91.224	Gopherus_agassizii
ENSCATG00000008239	SBNO1	99	99.820	ENSGGOG00000015000	SBNO1	99	100.000	Gorilla_gorilla
ENSCATG00000008239	SBNO1	97	70.951	ENSHBUG00000011910	sbno1	97	71.202	Haplochromis_burtoni
ENSCATG00000008239	SBNO1	98	99.101	ENSHGLG00000014165	-	99	95.461	Heterocephalus_glaber_female
ENSCATG00000008239	SBNO1	92	84.676	ENSHCOG00000003246	sbno1	92	84.980	Hippocampus_comes
ENSCATG00000008239	SBNO1	99	85.791	ENSIPUG00000015830	Sbno1	89	88.978	Ictalurus_punctatus
ENSCATG00000008239	SBNO1	99	99.458	ENSSTOG00000023221	SBNO1	99	99.458	Ictidomys_tridecemlineatus
ENSCATG00000008239	SBNO1	99	97.279	ENSJJAG00000001741	Sbno1	97	97.630	Jaculus_jaculus
ENSCATG00000008239	SBNO1	98	83.935	ENSKMAG00000009696	sbno1	93	83.935	Kryptolebias_marmoratus
ENSCATG00000008239	SBNO1	99	85.278	ENSLBEG00000007623	sbno1	91	85.278	Labrus_bergylta
ENSCATG00000008239	SBNO1	98	81.647	ENSLACG00000017227	SBNO1	93	90.625	Latimeria_chalumnae
ENSCATG00000008239	SBNO1	98	88.849	ENSLOCG00000005725	sbno1	90	88.849	Lepisosteus_oculatus
ENSCATG00000008239	SBNO1	98	98.734	ENSLAFG00000002135	SBNO1	97	97.185	Loxodonta_africana
ENSCATG00000008239	SBNO1	99	99.320	ENSMFAG00000031429	SBNO1	99	97.840	Macaca_fascicularis
ENSCATG00000008239	SBNO1	99	99.320	ENSMMUG00000011496	SBNO1	99	97.840	Macaca_mulatta
ENSCATG00000008239	SBNO1	99	100.000	ENSMLEG00000033260	SBNO1	99	100.000	Mandrillus_leucophaeus
ENSCATG00000008239	SBNO1	99	84.560	ENSMAMG00000005473	sbno1	91	84.560	Mastacembelus_armatus
ENSCATG00000008239	SBNO1	98	95.660	ENSMGAG00000003274	SBNO1	98	92.053	Meleagris_gallopavo
ENSCATG00000008239	SBNO1	50	96.203	ENSMAUG00000004834	-	96	96.378	Mesocricetus_auratus
ENSCATG00000008239	SBNO1	99	96.750	ENSMICG00000006573	-	99	96.564	Microcebus_murinus
ENSCATG00000008239	SBNO1	99	96.486	ENSMOCG00000009390	Sbno1	98	98.734	Microtus_ochrogaster
ENSCATG00000008239	SBNO1	97	83.929	ENSMMOG00000008691	sbno1	91	83.929	Mola_mola
ENSCATG00000008239	SBNO1	98	97.464	ENSMODG00000012470	SBNO1	97	94.006	Monodelphis_domestica
ENSCATG00000008239	SBNO1	99	82.585	ENSMALG00000001056	sbno1	99	74.684	Monopterus_albus
ENSCATG00000008239	SBNO1	98	99.457	MGP_CAROLIEiJ_G0027749	Sbno1	95	99.561	Mus_caroli
ENSCATG00000008239	SBNO1	98	99.457	ENSMUSG00000038095	Sbno1	97	97.702	Mus_musculus
ENSCATG00000008239	SBNO1	98	99.099	MGP_PahariEiJ_G0024329	Sbno1	95	99.561	Mus_pahari
ENSCATG00000008239	SBNO1	98	99.457	MGP_SPRETEiJ_G0028747	Sbno1	95	99.561	Mus_spretus
ENSCATG00000008239	SBNO1	98	99.458	ENSMPUG00000001658	SBNO1	99	96.328	Mustela_putorius_furo
ENSCATG00000008239	SBNO1	98	98.553	ENSMLUG00000017159	SBNO1	99	95.824	Myotis_lucifugus
ENSCATG00000008239	SBNO1	98	99.458	ENSNGAG00000012620	Sbno1	98	99.408	Nannospalax_galili
ENSCATG00000008239	SBNO1	97	77.099	ENSNBRG00000019189	sbno1	97	77.156	Neolamprologus_brichardi
ENSCATG00000008239	SBNO1	99	95.310	ENSNLEG00000001502	SBNO1	98	94.959	Nomascus_leucogenys
ENSCATG00000008239	SBNO1	58	96.774	ENSMEUG00000008768	-	92	89.873	Notamacropus_eugenii
ENSCATG00000008239	SBNO1	97	97.473	ENSOPRG00000011054	SBNO1	99	92.595	Ochotona_princeps
ENSCATG00000008239	SBNO1	98	99.101	ENSODEG00000009997	SBNO1	99	99.277	Octodon_degus
ENSCATG00000008239	SBNO1	98	83.213	ENSONIG00000015348	sbno1	91	83.213	Oreochromis_niloticus
ENSCATG00000008239	SBNO1	97	96.235	ENSOCUG00000002441	SBNO1	94	94.294	Oryctolagus_cuniculus
ENSCATG00000008239	SBNO1	99	82.406	ENSORLG00000001593	sbno1	91	82.406	Oryzias_latipes
ENSCATG00000008239	SBNO1	99	82.406	ENSORLG00020015216	sbno1	93	82.406	Oryzias_latipes_hni
ENSCATG00000008239	SBNO1	99	82.585	ENSORLG00015002726	sbno1	91	82.585	Oryzias_latipes_hsok
ENSCATG00000008239	SBNO1	99	82.703	ENSOMEG00000019313	sbno1	99	74.223	Oryzias_melastigma
ENSCATG00000008239	SBNO1	98	98.732	ENSOARG00000004404	SBNO1	99	95.827	Ovis_aries
ENSCATG00000008239	SBNO1	99	99.640	ENSPPAG00000024635	SBNO1	99	99.819	Pan_paniscus
ENSCATG00000008239	SBNO1	98	99.457	ENSPPRG00000022092	SBNO1	99	96.470	Panthera_pardus
ENSCATG00000008239	SBNO1	98	99.458	ENSPTIG00000017803	SBNO1	97	98.443	Panthera_tigris_altaica
ENSCATG00000008239	SBNO1	99	99.820	ENSPTRG00000005597	SBNO1	99	100.000	Pan_troglodytes
ENSCATG00000008239	SBNO1	99	100.000	ENSPANG00000011640	SBNO1	99	100.000	Papio_anubis
ENSCATG00000008239	SBNO1	98	86.126	ENSPKIG00000001441	sbno1	99	79.325	Paramormyrops_kingsleyae
ENSCATG00000008239	SBNO1	89	91.216	ENSPSIG00000009256	-	99	85.814	Pelodiscus_sinensis
ENSCATG00000008239	SBNO1	98	94.604	ENSPSIG00000009572	-	98	91.347	Pelodiscus_sinensis
ENSCATG00000008239	SBNO1	98	98.373	ENSPEMG00000016087	Sbno1	99	98.373	Peromyscus_maniculatus_bairdii
ENSCATG00000008239	SBNO1	98	97.101	ENSPCIG00000010985	SBNO1	98	94.197	Phascolarctos_cinereus
ENSCATG00000008239	SBNO1	99	83.842	ENSPFOG00000005069	sbno1	99	76.140	Poecilia_formosa
ENSCATG00000008239	SBNO1	99	83.842	ENSPLAG00000015015	sbno1	99	76.177	Poecilia_latipinna
ENSCATG00000008239	SBNO1	99	83.842	ENSPMEG00000021212	sbno1	99	76.085	Poecilia_mexicana
ENSCATG00000008239	SBNO1	99	83.483	ENSPREG00000017746	sbno1	91	83.935	Poecilia_reticulata
ENSCATG00000008239	SBNO1	98	100.000	ENSPPYG00000005084	SBNO1	99	97.264	Pongo_abelii
ENSCATG00000008239	SBNO1	91	88.939	ENSPCAG00000008634	SBNO1	85	92.251	Procavia_capensis
ENSCATG00000008239	SBNO1	98	99.277	ENSPCOG00000024277	SBNO1	99	99.273	Propithecus_coquereli
ENSCATG00000008239	SBNO1	91	99.008	ENSPVAG00000015304	SBNO1	87	99.008	Pteropus_vampyrus
ENSCATG00000008239	SBNO1	98	83.213	ENSPNYG00000004291	sbno1	99	75.282	Pundamilia_nyererei
ENSCATG00000008239	SBNO1	98	87.410	ENSPNAG00000015622	sbno1	91	87.410	Pygocentrus_nattereri
ENSCATG00000008239	SBNO1	98	99.457	ENSRNOG00000001064	Sbno1	99	99.457	Rattus_norvegicus
ENSCATG00000008239	SBNO1	99	100.000	ENSRROG00000034230	SBNO1	99	100.000	Rhinopithecus_roxellana
ENSCATG00000008239	SBNO1	99	93.122	ENSSBOG00000015422	SBNO1	100	93.676	Saimiri_boliviensis_boliviensis
ENSCATG00000008239	SBNO1	99	86.126	ENSSFOG00015019025	sbno1	93	86.126	Scleropages_formosus
ENSCATG00000008239	SBNO1	99	83.124	ENSSMAG00000013640	sbno1	99	75.337	Scophthalmus_maximus
ENSCATG00000008239	SBNO1	99	84.201	ENSSDUG00000023480	sbno1	91	84.201	Seriola_dumerili
ENSCATG00000008239	SBNO1	99	84.201	ENSSLDG00000007928	sbno1	91	84.201	Seriola_lalandi_dorsalis
ENSCATG00000008239	SBNO1	89	98.220	ENSSARG00000002594	SBNO1	89	98.220	Sorex_araneus
ENSCATG00000008239	SBNO1	98	93.874	ENSSPUG00000012640	SBNO1	98	90.971	Sphenodon_punctatus
ENSCATG00000008239	SBNO1	98	83.124	ENSSPAG00000016244	sbno1	99	74.191	Stegastes_partitus
ENSCATG00000008239	SBNO1	98	99.458	ENSSSCG00000009776	SBNO1	99	96.328	Sus_scrofa
ENSCATG00000008239	SBNO1	98	95.660	ENSTGUG00000005380	SBNO1	99	90.641	Taeniopygia_guttata
ENSCATG00000008239	SBNO1	97	84.672	ENSTRUG00000018490	sbno1	92	84.672	Takifugu_rubripes
ENSCATG00000008239	SBNO1	53	73.475	ENSTNIG00000013506	sbno1	99	70.463	Tetraodon_nigroviridis
ENSCATG00000008239	SBNO1	98	99.458	ENSUAMG00000019671	SBNO1	97	98.444	Ursus_americanus
ENSCATG00000008239	SBNO1	98	99.458	ENSUMAG00000004002	SBNO1	97	98.444	Ursus_maritimus
ENSCATG00000008239	SBNO1	95	93.478	ENSVPAG00000007024	SBNO1	95	93.478	Vicugna_pacos
ENSCATG00000008239	SBNO1	98	99.458	ENSVVUG00000027807	SBNO1	97	98.370	Vulpes_vulpes
ENSCATG00000008239	SBNO1	98	92.780	ENSXETG00000031930	SBNO1	92	92.780	Xenopus_tropicalis
ENSCATG00000008239	SBNO1	85	85.827	ENSXCOG00000011607	sbno1	86	85.602	Xiphophorus_couchianus
ENSCATG00000008239	SBNO1	99	83.483	ENSXMAG00000002140	sbno1	92	83.483	Xiphophorus_maculatus