EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000011564 (Gene tree)
Gene ID: 105577477
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 14661 bases
Position: chrKQ012441.1:9626870-9641530
Accession: 105577477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000003687	KH_1	PF00013.29	2.2e-07	1	1
ENSCATP00000003706	KH_1	PF00013.29	3e-07	1	1
ENSCATP00000003660	KH_1	PF00013.29	4.3e-07	1	1
ENSCATP00000003567	KH_1	PF00013.29	4.3e-07	1	1
ENSCATP00000003593	KH_1	PF00013.29	4.4e-07	1	1
ENSCATP00000003648	KH_1	PF00013.29	4.6e-07	1	1
ENSCATP00000003687	zf-CCHC	PF00098.23	0.0002	1	1
ENSCATP00000003706	zf-CCHC	PF00098.23	0.00021	1	1
ENSCATP00000003660	zf-CCHC	PF00098.23	0.00027	1	1
ENSCATP00000003593	zf-CCHC	PF00098.23	0.00029	1	1
ENSCATP00000003567	zf-CCHC	PF00098.23	0.00029	1	1
ENSCATP00000003648	zf-CCHC	PF00098.23	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000015493	SF1-202	3275	XM_012041814	ENSCATP00000003593	638 (aa)	XP_011897204	A0A2K5KSC0
ENSCATT00000015826	SF1-205	1257	-	ENSCATP00000003687	418 (aa)	-	A0A2K5KSJ8
ENSCATT00000015425	SF1-201	3707	XM_012041815	ENSCATP00000003567	639 (aa)	XP_011897205	A0A2K5KS82
ENSCATT00000015892	SF1-206	1500	-	ENSCATP00000003706	499 (aa)	-	A0A2K5KSP4
ENSCATT00000015723	SF1-204	1824	-	ENSCATP00000003660	607 (aa)	-	A0A2K5KSJ9
ENSCATT00000015687	SF1-203	1977	-	ENSCATP00000003648	658 (aa)	-	A0A2K5KSH3

Gene Model

Click here to download ENSCATG00000011564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000011564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000011564	SF1	90	80.928	ENSAPOG00000012341	sf1	57	79.146	Acanthochromis_polyacanthus
ENSCATG00000011564	SF1	99	91.757	ENSAMEG00000017828	SF1	100	94.216	Ailuropoda_melanoleuca
ENSCATG00000011564	SF1	89	82.713	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSCATG00000011564	SF1	90	80.412	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSCATG00000011564	SF1	90	80.412	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSCATG00000011564	SF1	89	81.579	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSCATG00000011564	SF1	100	99.844	ENSANAG00000026664	-	100	99.844	Aotus_nancymaae
ENSCATG00000011564	SF1	96	87.255	ENSANAG00000022607	-	99	87.562	Aotus_nancymaae
ENSCATG00000011564	SF1	88	84.282	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSCATG00000011564	SF1	88	85.829	ENSAMXG00000003630	sf1	50	82.723	Astyanax_mexicanus
ENSCATG00000011564	SF1	100	100.000	ENSBTAG00000001035	SF1	100	100.000	Bos_taurus
ENSCATG00000011564	SF1	100	100.000	ENSCJAG00000002780	SF1	100	100.000	Callithrix_jacchus
ENSCATG00000011564	SF1	100	100.000	ENSCAFG00000014239	SF1	100	100.000	Canis_familiaris
ENSCATG00000011564	SF1	100	100.000	ENSCAFG00020014381	SF1	100	100.000	Canis_lupus_dingo
ENSCATG00000011564	SF1	100	100.000	ENSCHIG00000025867	SF1	100	100.000	Capra_hircus
ENSCATG00000011564	SF1	82	98.925	ENSTSYG00000033618	SF1	98	98.925	Carlito_syrichta
ENSCATG00000011564	SF1	88	99.457	ENSCAPG00000010762	SF1	87	98.636	Cavia_aperea
ENSCATG00000011564	SF1	98	99.522	ENSCPOG00000012290	SF1	100	99.522	Cavia_porcellus
ENSCATG00000011564	SF1	100	100.000	ENSCCAG00000037881	SF1	100	100.000	Cebus_capucinus
ENSCATG00000011564	SF1	99	86.091	ENSCCAG00000023781	-	94	85.159	Cebus_capucinus
ENSCATG00000011564	SF1	95	98.947	ENSCSAG00000007258	SF1	97	99.622	Chlorocebus_sabaeus
ENSCATG00000011564	SF1	84	92.571	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSCATG00000011564	SF1	88	92.683	ENSCPBG00000023763	SF1	66	85.135	Chrysemys_picta_bellii
ENSCATG00000011564	SF1	73	67.093	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSCATG00000011564	SF1	86	59.137	ENSCSAVG00000009055	-	72	63.787	Ciona_savignyi
ENSCATG00000011564	SF1	100	100.000	ENSCANG00000042201	SF1	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000011564	SF1	100	99.531	ENSCGRG00001003677	Sf1	100	99.531	Cricetulus_griseus_chok1gshd
ENSCATG00000011564	SF1	95	98.105	ENSCGRG00000001708	Sf1	97	97.905	Cricetulus_griseus_crigri
ENSCATG00000011564	SF1	89	80.628	ENSCSEG00000014375	sf1	53	80.105	Cynoglossus_semilaevis
ENSCATG00000011564	SF1	89	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSCATG00000011564	SF1	91	82.474	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSCATG00000011564	SF1	95	98.526	ENSDNOG00000001282	SF1	97	99.055	Dasypus_novemcinctus
ENSCATG00000011564	SF1	100	100.000	ENSDORG00000016334	Sf1	100	100.000	Dipodomys_ordii
ENSCATG00000011564	SF1	92	92.479	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSCATG00000011564	SF1	95	98.526	ENSEASG00005018272	SF1	97	99.244	Equus_asinus_asinus
ENSCATG00000011564	SF1	95	98.737	ENSECAG00000024544	SF1	97	99.433	Equus_caballus
ENSCATG00000011564	SF1	78	99.077	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSCATG00000011564	SF1	88	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSCATG00000011564	SF1	100	100.000	ENSFCAG00000012231	SF1	100	100.000	Felis_catus
ENSCATG00000011564	SF1	98	94.127	ENSFDAG00000009833	SF1	99	94.127	Fukomys_damarensis
ENSCATG00000011564	SF1	91	80.155	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSCATG00000011564	SF1	79	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSCATG00000011564	SF1	91	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSCATG00000011564	SF1	92	80.000	ENSGACG00000000826	sf1	67	78.947	Gasterosteus_aculeatus
ENSCATG00000011564	SF1	88	92.683	ENSGAGG00000021691	SF1	72	85.135	Gopherus_agassizii
ENSCATG00000011564	SF1	89	82.895	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSCATG00000011564	SF1	100	99.843	ENSHGLG00000009541	SF1	100	99.843	Heterocephalus_glaber_female
ENSCATG00000011564	SF1	88	100.000	ENSHGLG00100013879	-	99	88.226	Heterocephalus_glaber_male
ENSCATG00000011564	SF1	78	88.974	ENSHGLG00100008076	-	87	87.067	Heterocephalus_glaber_male
ENSCATG00000011564	SF1	91	89.005	ENSHGLG00100008255	-	94	86.555	Heterocephalus_glaber_male
ENSCATG00000011564	SF1	89	80.628	ENSHCOG00000011388	sf1	58	76.942	Hippocampus_comes
ENSCATG00000011564	SF1	90	93.973	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSCATG00000011564	SF1	98	100.000	ENSSTOG00000009790	-	100	100.000	Ictidomys_tridecemlineatus
ENSCATG00000011564	SF1	100	99.844	ENSJJAG00000011788	Sf1	100	99.844	Jaculus_jaculus
ENSCATG00000011564	SF1	91	81.841	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSCATG00000011564	SF1	89	82.199	ENSLBEG00000019836	sf1	64	78.230	Labrus_bergylta
ENSCATG00000011564	SF1	90	81.053	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSCATG00000011564	SF1	88	85.294	ENSLOCG00000002130	sf1	59	82.552	Lepisosteus_oculatus
ENSCATG00000011564	SF1	99	97.385	ENSLAFG00000007201	SF1	100	97.385	Loxodonta_africana
ENSCATG00000011564	SF1	100	100.000	ENSMFAG00000033122	SF1	100	100.000	Macaca_fascicularis
ENSCATG00000011564	SF1	100	100.000	ENSMMUG00000022606	SF1	100	100.000	Macaca_mulatta
ENSCATG00000011564	SF1	100	100.000	ENSMNEG00000037901	SF1	100	100.000	Macaca_nemestrina
ENSCATG00000011564	SF1	100	100.000	ENSMLEG00000040706	SF1	99	100.000	Mandrillus_leucophaeus
ENSCATG00000011564	SF1	90	80.928	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSCATG00000011564	SF1	89	82.632	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSCATG00000011564	SF1	100	99.216	ENSMAUG00000014064	Sf1	100	99.216	Mesocricetus_auratus
ENSCATG00000011564	SF1	100	99.844	ENSMICG00000001202	SF1	100	99.844	Microcebus_murinus
ENSCATG00000011564	SF1	100	99.216	ENSMOCG00000022038	Sf1	100	99.216	Microtus_ochrogaster
ENSCATG00000011564	SF1	88	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSCATG00000011564	SF1	89	98.391	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSCATG00000011564	SF1	89	82.888	ENSMALG00000020521	sf1	68	76.359	Monopterus_albus
ENSCATG00000011564	SF1	100	99.374	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSCATG00000011564	SF1	100	99.374	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSCATG00000011564	SF1	100	99.374	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSCATG00000011564	SF1	100	99.374	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSCATG00000011564	SF1	100	98.748	ENSMPUG00000012684	SF1	100	98.748	Mustela_putorius_furo
ENSCATG00000011564	SF1	91	95.288	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSCATG00000011564	SF1	99	99.683	ENSMLUG00000015217	-	99	99.683	Myotis_lucifugus
ENSCATG00000011564	SF1	100	99.687	ENSNGAG00000005550	Sf1	100	99.687	Nannospalax_galili
ENSCATG00000011564	SF1	88	84.282	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSCATG00000011564	SF1	100	99.844	ENSNLEG00000005236	-	100	99.844	Nomascus_leucogenys
ENSCATG00000011564	SF1	95	97.474	ENSMEUG00000013424	SF1	97	98.246	Notamacropus_eugenii
ENSCATG00000011564	SF1	95	98.319	ENSOPRG00000005008	SF1	96	99.158	Ochotona_princeps
ENSCATG00000011564	SF1	100	92.705	ENSODEG00000006102	-	100	92.705	Octodon_degus
ENSCATG00000011564	SF1	89	82.895	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSCATG00000011564	SF1	79	88.608	ENSOANG00000002909	SF1	97	87.817	Ornithorhynchus_anatinus
ENSCATG00000011564	SF1	99	99.841	ENSOCUG00000026486	SF1	100	99.841	Oryctolagus_cuniculus
ENSCATG00000011564	SF1	89	81.102	ENSORLG00000011853	sf1	58	76.739	Oryzias_latipes
ENSCATG00000011564	SF1	91	79.744	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSCATG00000011564	SF1	89	80.577	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSCATG00000011564	SF1	91	80.256	ENSOMEG00000005210	sf1	60	77.458	Oryzias_melastigma
ENSCATG00000011564	SF1	100	99.843	ENSOGAG00000016196	SF1	100	99.843	Otolemur_garnettii
ENSCATG00000011564	SF1	91	100.000	ENSOARG00000009166	SF1	97	95.126	Ovis_aries
ENSCATG00000011564	SF1	99	99.272	ENSPPAG00000002799	-	100	100.000	Pan_paniscus
ENSCATG00000011564	SF1	98	100.000	ENSPPRG00000013566	SF1	100	100.000	Panthera_pardus
ENSCATG00000011564	SF1	90	99.200	ENSPTIG00000016141	SF1	92	100.000	Panthera_tigris_altaica
ENSCATG00000011564	SF1	100	100.000	ENSPTRG00000003846	SF1	100	100.000	Pan_troglodytes
ENSCATG00000011564	SF1	100	100.000	ENSPANG00000020754	SF1	100	100.000	Papio_anubis
ENSCATG00000011564	SF1	76	78.834	ENSPKIG00000012116	sf1	89	73.775	Paramormyrops_kingsleyae
ENSCATG00000011564	SF1	70	87.179	ENSPSIG00000003610	SF1	97	75.490	Pelodiscus_sinensis
ENSCATG00000011564	SF1	100	99.373	ENSPEMG00000010463	Sf1	100	99.373	Peromyscus_maniculatus_bairdii
ENSCATG00000011564	SF1	80	72.107	ENSPMAG00000008272	sf1	53	66.488	Petromyzon_marinus
ENSCATG00000011564	SF1	100	98.905	ENSPCIG00000018173	SF1	100	98.905	Phascolarctos_cinereus
ENSCATG00000011564	SF1	91	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSCATG00000011564	SF1	88	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSCATG00000011564	SF1	88	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSCATG00000011564	SF1	90	82.292	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSCATG00000011564	SF1	100	99.843	ENSPPYG00000003098	-	100	99.843	Pongo_abelii
ENSCATG00000011564	SF1	95	98.316	ENSPCAG00000013631	SF1	78	97.909	Procavia_capensis
ENSCATG00000011564	SF1	100	99.844	ENSPCOG00000027546	SF1	100	99.844	Propithecus_coquereli
ENSCATG00000011564	SF1	95	98.526	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSCATG00000011564	SF1	89	82.632	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSCATG00000011564	SF1	89	85.185	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSCATG00000011564	SF1	100	99.374	ENSRNOG00000021085	Sf1	100	99.374	Rattus_norvegicus
ENSCATG00000011564	SF1	100	97.883	ENSRBIG00000042818	SF1	100	97.883	Rhinopithecus_bieti
ENSCATG00000011564	SF1	100	98.086	ENSRROG00000045655	SF1	99	100.000	Rhinopithecus_roxellana
ENSCATG00000011564	SF1	70	43.182	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSCATG00000011564	SF1	99	80.815	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSCATG00000011564	SF1	90	91.906	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSCATG00000011564	SF1	91	81.137	ENSSFOG00015021978	sf1	58	77.859	Scleropages_formosus
ENSCATG00000011564	SF1	89	79.896	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSCATG00000011564	SF1	90	80.206	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSCATG00000011564	SF1	90	80.206	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSCATG00000011564	SF1	91	96.923	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSCATG00000011564	SF1	85	92.416	ENSSPUG00000012907	SF1	86	81.226	Sphenodon_punctatus
ENSCATG00000011564	SF1	90	80.670	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSCATG00000011564	SF1	100	99.844	ENSSSCG00000013021	SF1	100	99.844	Sus_scrofa
ENSCATG00000011564	SF1	92	72.265	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSCATG00000011564	SF1	96	84.804	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSCATG00000011564	SF1	94	94.444	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSCATG00000011564	SF1	82	97.137	ENSUAMG00000011977	SF1	100	97.137	Ursus_americanus
ENSCATG00000011564	SF1	89	100.000	ENSUMAG00000007268	SF1	95	98.864	Ursus_maritimus
ENSCATG00000011564	SF1	65	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSCATG00000011564	SF1	95	98.947	ENSVVUG00000028585	SF1	97	99.622	Vulpes_vulpes
ENSCATG00000011564	SF1	94	82.663	ENSXETG00000008434	sf1	66	83.805	Xenopus_tropicalis
ENSCATG00000011564	SF1	87	84.932	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSCATG00000011564	SF1	89	83.113	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus