EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000011754 (Gene tree)
Gene ID: 105574875
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 86122 bases
Position: chrKQ012331.1:5703689-5789810
Accession: 105574875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000002798	SpoU_methylase	PF00588.19	8.7e-31	1	1
ENSCATP00000002809	SpoU_methylase	PF00588.19	8.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000013217	TARBP1-202	4863	-	ENSCATP00000002809	1620 (aa)	-	A0A2K5KQ29
ENSCATT00000013197	TARBP1-201	5157	XM_012036178	ENSCATP00000002798	1621 (aa)	XP_011891568	A0A2K5KQ28

Gene Model

Click here to download ENSCATG00000011754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000011754's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000011754	TARBP1	100	96.854	ENSG00000059588	TARBP1	100	96.854	Homo_sapiens
ENSCATG00000011754	TARBP1	99	42.090	ENSAPOG00000016419	si:dkey-85a20.4	86	45.429	Acanthochromis_polyacanthus
ENSCATG00000011754	TARBP1	84	85.318	ENSAMEG00000003359	TARBP1	100	85.318	Ailuropoda_melanoleuca
ENSCATG00000011754	TARBP1	99	42.446	ENSATEG00000020266	si:dkey-85a20.4	85	45.819	Anabas_testudineus
ENSCATG00000011754	TARBP1	84	67.615	ENSAPLG00000007666	TARBP1	100	67.615	Anas_platyrhynchos
ENSCATG00000011754	TARBP1	99	58.636	ENSACAG00000001142	TARBP1	99	58.072	Anolis_carolinensis
ENSCATG00000011754	TARBP1	88	91.784	ENSANAG00000022031	TARBP1	100	86.737	Aotus_nancymaae
ENSCATG00000011754	TARBP1	99	84.525	ENSBTAG00000004517	TARBP1	99	84.525	Bos_taurus
ENSCATG00000011754	TARBP1	100	93.893	ENSCJAG00000018155	TARBP1	100	93.893	Callithrix_jacchus
ENSCATG00000011754	TARBP1	88	85.296	ENSCAFG00000011533	TARBP1	100	85.593	Canis_familiaris
ENSCATG00000011754	TARBP1	99	84.375	ENSCAFG00020027141	TARBP1	99	85.049	Canis_lupus_dingo
ENSCATG00000011754	TARBP1	99	83.005	ENSCHIG00000011437	TARBP1	99	83.436	Capra_hircus
ENSCATG00000011754	TARBP1	81	88.244	ENSTSYG00000010382	TARBP1	97	88.244	Carlito_syrichta
ENSCATG00000011754	TARBP1	79	68.906	ENSCAPG00000010831	TARBP1	99	68.906	Cavia_aperea
ENSCATG00000011754	TARBP1	99	75.617	ENSCPOG00000013995	TARBP1	99	76.049	Cavia_porcellus
ENSCATG00000011754	TARBP1	100	94.571	ENSCCAG00000037278	TARBP1	100	94.571	Cebus_capucinus
ENSCATG00000011754	TARBP1	83	80.000	ENSCLAG00000003655	TARBP1	99	80.000	Chinchilla_lanigera
ENSCATG00000011754	TARBP1	79	98.834	ENSCSAG00000010100	TARBP1	100	98.834	Chlorocebus_sabaeus
ENSCATG00000011754	TARBP1	94	66.645	ENSCPBG00000005587	TARBP1	99	65.744	Chrysemys_picta_bellii
ENSCATG00000011754	TARBP1	84	98.529	ENSCANG00000034343	TARBP1	100	98.529	Colobus_angolensis_palliatus
ENSCATG00000011754	TARBP1	99	74.443	ENSCGRG00001016690	Tarbp1	99	74.010	Cricetulus_griseus_chok1gshd
ENSCATG00000011754	TARBP1	91	76.088	ENSCGRG00000016893	Tarbp1	99	76.622	Cricetulus_griseus_crigri
ENSCATG00000011754	TARBP1	99	39.672	ENSCSEG00000005255	si:dkey-85a20.4	88	45.597	Cynoglossus_semilaevis
ENSCATG00000011754	TARBP1	87	45.669	ENSDARG00000079055	si:dkey-85a20.4	99	54.844	Danio_rerio
ENSCATG00000011754	TARBP1	99	83.394	ENSDNOG00000008637	TARBP1	99	82.971	Dasypus_novemcinctus
ENSCATG00000011754	TARBP1	80	74.383	ENSDORG00000007984	Tarbp1	100	74.383	Dipodomys_ordii
ENSCATG00000011754	TARBP1	99	87.562	ENSEASG00005000252	TARBP1	99	87.131	Equus_asinus_asinus
ENSCATG00000011754	TARBP1	99	87.500	ENSECAG00000023673	TARBP1	99	88.184	Equus_caballus
ENSCATG00000011754	TARBP1	85	44.742	ENSELUG00000012193	si:dkey-85a20.4	86	44.852	Esox_lucius
ENSCATG00000011754	TARBP1	99	83.190	ENSFCAG00000014183	TARBP1	99	83.190	Felis_catus
ENSCATG00000011754	TARBP1	80	68.150	ENSFALG00000013565	TARBP1	99	68.095	Ficedula_albicollis
ENSCATG00000011754	TARBP1	79	75.936	ENSFDAG00000001308	TARBP1	99	76.012	Fukomys_damarensis
ENSCATG00000011754	TARBP1	92	53.803	ENSFHEG00000007565	si:dkey-85a20.4	85	53.803	Fundulus_heteroclitus
ENSCATG00000011754	TARBP1	84	42.755	ENSGMOG00000004549	si:dkey-85a20.4	99	42.826	Gadus_morhua
ENSCATG00000011754	TARBP1	99	59.411	ENSGALG00000011000	TARBP1	100	60.233	Gallus_gallus
ENSCATG00000011754	TARBP1	99	41.279	ENSGAFG00000007387	si:dkey-85a20.4	85	44.642	Gambusia_affinis
ENSCATG00000011754	TARBP1	86	45.084	ENSGACG00000005865	si:dkey-85a20.4	99	45.231	Gasterosteus_aculeatus
ENSCATG00000011754	TARBP1	99	66.728	ENSGAGG00000012102	TARBP1	98	71.469	Gopherus_agassizii
ENSCATG00000011754	TARBP1	85	93.382	ENSGGOG00000022879	TARBP1	100	93.382	Gorilla_gorilla
ENSCATG00000011754	TARBP1	86	46.484	ENSHBUG00000008877	si:dkey-85a20.4	86	46.484	Haplochromis_burtoni
ENSCATG00000011754	TARBP1	99	78.135	ENSHGLG00000011592	TARBP1	99	77.826	Heterocephalus_glaber_female
ENSCATG00000011754	TARBP1	96	78.141	ENSHGLG00100015169	TARBP1	99	78.141	Heterocephalus_glaber_male
ENSCATG00000011754	TARBP1	99	40.375	ENSIPUG00000005249	si:dkey-85a20.4	84	43.592	Ictalurus_punctatus
ENSCATG00000011754	TARBP1	88	75.926	ENSSTOG00000032291	TARBP1	99	84.444	Ictidomys_tridecemlineatus
ENSCATG00000011754	TARBP1	94	72.598	ENSJJAG00000017840	Tarbp1	99	72.598	Jaculus_jaculus
ENSCATG00000011754	TARBP1	79	48.193	ENSKMAG00000017546	si:dkey-85a20.4	71	48.594	Kryptolebias_marmoratus
ENSCATG00000011754	TARBP1	65	50.599	ENSLBEG00000012132	si:dkey-85a20.4	75	50.732	Labrus_bergylta
ENSCATG00000011754	TARBP1	99	51.658	ENSLACG00000004337	TARBP1	99	50.964	Latimeria_chalumnae
ENSCATG00000011754	TARBP1	99	46.422	ENSLOCG00000016214	si:dkey-85a20.4	85	50.390	Lepisosteus_oculatus
ENSCATG00000011754	TARBP1	96	82.242	ENSLAFG00000011394	TARBP1	99	82.416	Loxodonta_africana
ENSCATG00000011754	TARBP1	100	95.132	ENSMFAG00000041068	TARBP1	100	95.132	Macaca_fascicularis
ENSCATG00000011754	TARBP1	100	96.123	ENSMMUG00000021703	TARBP1	100	96.123	Macaca_mulatta
ENSCATG00000011754	TARBP1	100	99.013	ENSMNEG00000045002	TARBP1	100	99.013	Macaca_nemestrina
ENSCATG00000011754	TARBP1	84	99.262	ENSMLEG00000044182	TARBP1	100	99.262	Mandrillus_leucophaeus
ENSCATG00000011754	TARBP1	95	43.870	ENSMAMG00000021760	si:dkey-85a20.4	89	45.310	Mastacembelus_armatus
ENSCATG00000011754	TARBP1	86	46.414	ENSMZEG00005005751	si:dkey-85a20.4	86	46.414	Maylandia_zebra
ENSCATG00000011754	TARBP1	100	73.461	ENSMAUG00000020968	Tarbp1	99	73.214	Mesocricetus_auratus
ENSCATG00000011754	TARBP1	99	79.741	ENSMICG00000015280	TARBP1	99	79.482	Microcebus_murinus
ENSCATG00000011754	TARBP1	99	73.346	ENSMOCG00000004128	Tarbp1	99	73.160	Microtus_ochrogaster
ENSCATG00000011754	TARBP1	99	41.294	ENSMMOG00000007795	si:dkey-85a20.4	88	43.556	Mola_mola
ENSCATG00000011754	TARBP1	99	72.782	ENSMODG00000008504	TARBP1	100	72.678	Monodelphis_domestica
ENSCATG00000011754	TARBP1	85	45.071	ENSMALG00000002916	si:dkey-85a20.4	88	44.691	Monopterus_albus
ENSCATG00000011754	TARBP1	100	72.520	MGP_CAROLIEiJ_G0031729	Tarbp1	99	72.212	Mus_caroli
ENSCATG00000011754	TARBP1	100	72.274	ENSMUSG00000090290	Tarbp1	99	71.965	Mus_musculus
ENSCATG00000011754	TARBP1	99	72.868	MGP_PahariEiJ_G0023326	Tarbp1	99	72.559	Mus_pahari
ENSCATG00000011754	TARBP1	99	72.610	MGP_SPRETEiJ_G0032846	Tarbp1	99	72.301	Mus_spretus
ENSCATG00000011754	TARBP1	77	83.454	ENSMPUG00000002802	TARBP1	99	83.454	Mustela_putorius_furo
ENSCATG00000011754	TARBP1	84	74.637	ENSMLUG00000002414	TARBP1	99	74.637	Myotis_lucifugus
ENSCATG00000011754	TARBP1	100	97.039	ENSNLEG00000002518	TARBP1	100	97.039	Nomascus_leucogenys
ENSCATG00000011754	TARBP1	69	78.178	ENSMEUG00000011370	-	69	78.178	Notamacropus_eugenii
ENSCATG00000011754	TARBP1	74	86.401	ENSOPRG00000013822	TARBP1	71	86.401	Ochotona_princeps
ENSCATG00000011754	TARBP1	99	73.317	ENSODEG00000005238	TARBP1	99	73.070	Octodon_degus
ENSCATG00000011754	TARBP1	86	46.316	ENSONIG00000009789	si:dkey-85a20.4	99	46.316	Oreochromis_niloticus
ENSCATG00000011754	TARBP1	100	85.406	ENSOCUG00000017418	TARBP1	99	85.099	Oryctolagus_cuniculus
ENSCATG00000011754	TARBP1	99	40.544	ENSORLG00000010529	si:dkey-85a20.4	88	43.093	Oryzias_latipes
ENSCATG00000011754	TARBP1	99	40.253	ENSORLG00020019264	si:dkey-85a20.4	88	42.916	Oryzias_latipes_hni
ENSCATG00000011754	TARBP1	99	40.397	ENSORLG00015003276	si:dkey-85a20.4	87	43.034	Oryzias_latipes_hsok
ENSCATG00000011754	TARBP1	99	84.331	ENSOGAG00000002379	TARBP1	100	84.084	Otolemur_garnettii
ENSCATG00000011754	TARBP1	98	83.729	ENSOARG00000003434	TARBP1	99	83.786	Ovis_aries
ENSCATG00000011754	TARBP1	84	97.139	ENSPPAG00000028097	TARBP1	100	97.139	Pan_paniscus
ENSCATG00000011754	TARBP1	95	88.690	ENSPPRG00000013561	TARBP1	99	73.761	Panthera_pardus
ENSCATG00000011754	TARBP1	83	85.565	ENSPTIG00000009281	TARBP1	99	85.565	Panthera_tigris_altaica
ENSCATG00000011754	TARBP1	100	96.734	ENSPTRG00000002124	TARBP1	100	96.734	Pan_troglodytes
ENSCATG00000011754	TARBP1	100	99.136	ENSPANG00000021933	TARBP1	100	99.136	Papio_anubis
ENSCATG00000011754	TARBP1	100	43.136	ENSPKIG00000016716	si:dkey-85a20.4	85	46.989	Paramormyrops_kingsleyae
ENSCATG00000011754	TARBP1	79	70.698	ENSPSIG00000010699	TARBP1	100	70.775	Pelodiscus_sinensis
ENSCATG00000011754	TARBP1	97	75.848	ENSPEMG00000006888	Tarbp1	99	76.582	Peromyscus_maniculatus_bairdii
ENSCATG00000011754	TARBP1	92	83.495	ENSPCIG00000029710	TARBP1	99	83.495	Phascolarctos_cinereus
ENSCATG00000011754	TARBP1	86	44.711	ENSPFOG00000013020	si:dkey-85a20.4	99	44.781	Poecilia_formosa
ENSCATG00000011754	TARBP1	99	41.587	ENSPLAG00000006044	si:dkey-85a20.4	85	44.937	Poecilia_latipinna
ENSCATG00000011754	TARBP1	99	41.727	ENSPMEG00000017857	si:dkey-85a20.4	85	45.050	Poecilia_mexicana
ENSCATG00000011754	TARBP1	99	41.537	ENSPREG00000022753	si:dkey-85a20.4	85	44.898	Poecilia_reticulata
ENSCATG00000011754	TARBP1	91	97.656	ENSPPYG00000000102	TARBP1	100	97.656	Pongo_abelii
ENSCATG00000011754	TARBP1	85	93.333	ENSPCAG00000004808	TARBP1	85	93.333	Procavia_capensis
ENSCATG00000011754	TARBP1	99	86.366	ENSPCOG00000005666	TARBP1	99	86.235	Propithecus_coquereli
ENSCATG00000011754	TARBP1	99	67.647	ENSPVAG00000014798	TARBP1	99	67.831	Pteropus_vampyrus
ENSCATG00000011754	TARBP1	86	45.609	ENSPNYG00000019135	si:dkey-85a20.4	85	45.500	Pundamilia_nyererei
ENSCATG00000011754	TARBP1	100	68.453	ENSRNOG00000053574	Tarbp1	99	67.961	Rattus_norvegicus
ENSCATG00000011754	TARBP1	98	91.298	ENSRBIG00000043362	TARBP1	99	100.000	Rhinopithecus_bieti
ENSCATG00000011754	TARBP1	100	93.831	ENSRROG00000029527	TARBP1	100	93.954	Rhinopithecus_roxellana
ENSCATG00000011754	TARBP1	91	92.699	ENSSBOG00000034503	TARBP1	100	93.333	Saimiri_boliviensis_boliviensis
ENSCATG00000011754	TARBP1	83	75.461	ENSSHAG00000000013	TARBP1	100	75.461	Sarcophilus_harrisii
ENSCATG00000011754	TARBP1	91	44.265	ENSSFOG00015002660	si:dkey-85a20.4	97	46.801	Scleropages_formosus
ENSCATG00000011754	TARBP1	91	44.183	ENSSMAG00000007081	si:dkey-85a20.4	88	44.851	Scophthalmus_maximus
ENSCATG00000011754	TARBP1	99	41.144	ENSSDUG00000023566	si:dkey-85a20.4	86	44.437	Seriola_dumerili
ENSCATG00000011754	TARBP1	99	43.250	ENSSLDG00000020200	si:dkey-85a20.4	86	46.396	Seriola_lalandi_dorsalis
ENSCATG00000011754	TARBP1	89	85.219	ENSSARG00000012207	TARBP1	89	85.219	Sorex_araneus
ENSCATG00000011754	TARBP1	99	64.774	ENSSPUG00000015364	TARBP1	100	64.713	Sphenodon_punctatus
ENSCATG00000011754	TARBP1	91	44.270	ENSSPAG00000007213	si:dkey-85a20.4	89	44.949	Stegastes_partitus
ENSCATG00000011754	TARBP1	99	85.415	ENSSSCG00000010160	TARBP1	99	85.663	Sus_scrofa
ENSCATG00000011754	TARBP1	80	68.043	ENSTGUG00000010214	TARBP1	100	68.043	Taeniopygia_guttata
ENSCATG00000011754	TARBP1	91	40.977	ENSTNIG00000016586	si:dkey-85a20.4	99	45.119	Tetraodon_nigroviridis
ENSCATG00000011754	TARBP1	91	83.143	ENSTTRG00000008707	TARBP1	95	83.143	Tursiops_truncatus
ENSCATG00000011754	TARBP1	82	84.789	ENSUMAG00000006730	TARBP1	99	84.789	Ursus_maritimus
ENSCATG00000011754	TARBP1	80	91.753	ENSVPAG00000007665	TARBP1	85	91.753	Vicugna_pacos
ENSCATG00000011754	TARBP1	85	85.766	ENSVVUG00000007460	TARBP1	97	85.766	Vulpes_vulpes
ENSCATG00000011754	TARBP1	84	56.309	ENSXETG00000016224	tarbp1	99	56.309	Xenopus_tropicalis
ENSCATG00000011754	TARBP1	82	46.460	ENSXCOG00000011779	si:dkey-85a20.4	97	46.460	Xiphophorus_couchianus
ENSCATG00000011754	TARBP1	65	43.216	ENSXMAG00000009600	si:dkey-85a20.4	100	43.123	Xiphophorus_maculatus