EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000013527 (Gene tree)
Gene ID: 105573037
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3G
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 137820 bases
Position: chrKQ009547.1:3562754-3700573
Accession: 105572988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000003628	APOBEC_N	PF08210.11	3.2e-100	1	2
ENSCATP00000003628	APOBEC_N	PF08210.11	3.2e-100	2	2
ENSCATP00000003609	APOBEC_N	PF08210.11	5e-88	1	2
ENSCATP00000003609	APOBEC_N	PF08210.11	5e-88	2	2
ENSCATP00000003574	APOBEC_N	PF08210.11	6.1e-88	1	2
ENSCATP00000003574	APOBEC_N	PF08210.11	6.1e-88	2	2
ENSCATP00000003577	APOBEC_N	PF08210.11	6.1e-88	1	2
ENSCATP00000003577	APOBEC_N	PF08210.11	6.1e-88	2	2
ENSCATP00000003547	APOBEC_N	PF08210.11	6.4e-88	1	2
ENSCATP00000003547	APOBEC_N	PF08210.11	6.4e-88	2	2
ENSCATP00000003559	APOBEC_N	PF08210.11	4.9e-50	1	1
ENSCATP00000003613	APOBEC_N	PF08210.11	4.9e-50	1	1
ENSCATP00000003628	APOBEC_C	PF05240.14	3.8e-63	1	2
ENSCATP00000003628	APOBEC_C	PF05240.14	3.8e-63	2	2
ENSCATP00000003609	APOBEC_C	PF05240.14	1.5e-62	1	2
ENSCATP00000003609	APOBEC_C	PF05240.14	1.5e-62	2	2
ENSCATP00000003574	APOBEC_C	PF05240.14	1.5e-62	1	2
ENSCATP00000003574	APOBEC_C	PF05240.14	1.5e-62	2	2
ENSCATP00000003577	APOBEC_C	PF05240.14	1.5e-62	1	2
ENSCATP00000003577	APOBEC_C	PF05240.14	1.5e-62	2	2
ENSCATP00000003547	APOBEC_C	PF05240.14	1.8e-62	1	2
ENSCATP00000003547	APOBEC_C	PF05240.14	1.8e-62	2	2
ENSCATP00000003559	APOBEC_C	PF05240.14	5.5e-32	1	1
ENSCATP00000003613	APOBEC_C	PF05240.14	5.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000015545	-	1093	XM_012032038	ENSCATP00000003613	202 (aa)	XP_011887428	A0A2K5KSE0
ENSCATT00000015613	-	1473	XM_012032024	ENSCATP00000003628	490 (aa)	XP_011887414	A0A2K5KSF3
ENSCATT00000015412	-	1329	-	ENSCATP00000003559	202 (aa)	-	A0A2K5KSE0
ENSCATT00000015460	-	2214	-	ENSCATP00000003577	394 (aa)	-	A0A2K5KS89
ENSCATT00000015441	-	2472	XM_012031978	ENSCATP00000003574	394 (aa)	XP_011887368	A0A2K5KS89
ENSCATT00000015536	-	1927	XM_012031952	ENSCATP00000003609	376 (aa)	XP_011887342	A0A2K5KSF0
ENSCATT00000015354	-	1197	-	ENSCATP00000003547	398 (aa)	-	A0A2K5KS61

Gene Model

Click here to download ENSCATG00000013527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000013527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000013527	-	57	41.558	ENSCATG00000021613	APOBEC1	54	41.558
ENSCATG00000013527	-	98	46.237	ENSCATG00000039986	AICDA	97	46.259
ENSCATG00000013527	-	97	30.220	ENSCATG00000010691	APOBEC2	80	33.514
ENSCATG00000013527	-	98	40.323	ENSCATG00000043226	APOBEC3C	100	49.735
ENSCATG00000013527	-	98	43.210	ENSCATG00000033502	-	100	60.789
ENSCATG00000013527	-	93	36.126	ENSCATG00000030302	APOBEC3H	98	36.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000013527	-	100	81.683	ENSG00000128383	APOBEC3A	100	81.683	Homo_sapiens
ENSCATG00000013527	-	100	83.878	ENSG00000179750	APOBEC3B	100	83.878	Homo_sapiens
ENSCATG00000013527	-	99	57.447	ENSCJAG00000012500	-	98	57.143	Callithrix_jacchus
ENSCATG00000013527	-	100	61.386	ENSTSYG00000035593	-	100	61.386	Carlito_syrichta
ENSCATG00000013527	-	96	68.912	ENSCCAG00000027450	-	96	68.912	Cebus_capucinus
ENSCATG00000013527	-	73	90.476	ENSCSAG00000018401	-	70	90.476	Chlorocebus_sabaeus
ENSCATG00000013527	-	100	91.837	ENSCSAG00000006445	-	100	91.837	Chlorocebus_sabaeus
ENSCATG00000013527	-	100	88.119	ENSCANG00000030513	-	100	88.119	Colobus_angolensis_palliatus
ENSCATG00000013527	-	96	81.865	ENSGGOG00000006721	APOBEC3B	99	81.481	Gorilla_gorilla
ENSCATG00000013527	-	100	91.584	ENSMFAG00000008980	APOBEC3A	100	91.584	Macaca_fascicularis
ENSCATG00000013527	-	100	92.079	ENSMMUG00000042504	APOBEC3A	100	92.079	Macaca_mulatta
ENSCATG00000013527	-	100	87.551	ENSMMUG00000004015	-	99	92.188	Macaca_mulatta
ENSCATG00000013527	-	95	87.943	ENSMNEG00000043211	-	95	91.818	Macaca_nemestrina
ENSCATG00000013527	-	96	87.047	ENSMLEG00000004809	-	99	96.825	Mandrillus_leucophaeus
ENSCATG00000013527	-	100	80.693	ENSNLEG00000015215	-	100	80.693	Nomascus_leucogenys
ENSCATG00000013527	-	100	85.510	ENSPPAG00000009288	APOBEC3B	100	85.510	Pan_paniscus
ENSCATG00000013527	-	100	78.776	ENSPTRG00000014384	APOBEC3B	100	78.776	Pan_troglodytes
ENSCATG00000013527	-	100	94.975	ENSPANG00000006941	APOBEC3B	100	94.975	Papio_anubis
ENSCATG00000013527	-	96	80.311	ENSPPYG00000011831	-	99	85.411	Pongo_abelii
ENSCATG00000013527	-	76	59.740	ENSPCOG00000017606	-	95	62.162	Propithecus_coquereli
ENSCATG00000013527	-	100	87.624	ENSRBIG00000042829	-	99	91.534	Rhinopithecus_bieti
ENSCATG00000013527	-	100	86.634	ENSRROG00000028773	APOBEC3G	99	91.534	Rhinopithecus_roxellana