EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000013541 (Gene tree)
Gene ID: 105587421
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 140992 bases
Position: chrKQ009668.1:8465826-8606817
Accession: 105587421
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000003646	La	PF05383.17	8.5e-19	1	1
ENSCATP00000003641	La	PF05383.17	1.9e-18	1	1
ENSCATP00000003637	La	PF05383.17	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000015664	LARP1B-202	1524	-	ENSCATP00000003641	507 (aa)	-	A0A2K5KSI1
ENSCATT00000015681	LARP1B-203	975	-	ENSCATP00000003646	324 (aa)	-	A0A2K5KSI6
ENSCATT00000015645	LARP1B-201	2709	XM_012063639	ENSCATP00000003637	902 (aa)	XP_011919029	A0A2K5KSF2

Gene Model

Click here to download ENSCATG00000013541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000013541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000013541	LARP1B	94	59.888	ENSCATG00000030675	LARP1	87	59.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000013541	LARP1B	100	96.499	ENSG00000138709	LARP1B	100	96.499	Homo_sapiens
ENSCATG00000013541	LARP1B	97	56.156	ENSAPOG00000020101	larp1b	83	56.326	Acanthochromis_polyacanthus
ENSCATG00000013541	LARP1B	100	88.955	ENSAMEG00000002748	LARP1B	100	89.818	Ailuropoda_melanoleuca
ENSCATG00000013541	LARP1B	96	54.785	ENSACIG00000023890	larp1b	82	54.189	Amphilophus_citrinellus
ENSCATG00000013541	LARP1B	97	47.249	ENSAOCG00000014268	larp1b	84	53.902	Amphiprion_ocellaris
ENSCATG00000013541	LARP1B	98	56.786	ENSAPEG00000004126	larp1b	83	56.678	Amphiprion_percula
ENSCATG00000013541	LARP1B	99	55.272	ENSATEG00000017849	larp1b	84	55.816	Anabas_testudineus
ENSCATG00000013541	LARP1B	96	67.916	ENSAPLG00000010129	LARP1B	98	67.991	Anas_platyrhynchos
ENSCATG00000013541	LARP1B	98	73.346	ENSACAG00000011338	LARP1B	86	76.733	Anolis_carolinensis
ENSCATG00000013541	LARP1B	99	86.355	ENSANAG00000034618	LARP1B	96	80.422	Aotus_nancymaae
ENSCATG00000013541	LARP1B	96	55.604	ENSACLG00000011948	larp1b	82	55.544	Astatotilapia_calliptera
ENSCATG00000013541	LARP1B	84	54.847	ENSAMXG00000006805	larp1b	83	51.477	Astyanax_mexicanus
ENSCATG00000013541	LARP1B	100	88.197	ENSBTAG00000012135	LARP1B	99	85.962	Bos_taurus
ENSCATG00000013541	LARP1B	100	94.981	ENSCJAG00000003338	LARP1B	100	94.981	Callithrix_jacchus
ENSCATG00000013541	LARP1B	100	90.185	ENSCAFG00000003831	LARP1B	100	90.185	Canis_familiaris
ENSCATG00000013541	LARP1B	100	89.945	ENSCAFG00020018899	LARP1B	100	89.254	Canis_lupus_dingo
ENSCATG00000013541	LARP1B	100	88.087	ENSCHIG00000023144	LARP1B	100	86.310	Capra_hircus
ENSCATG00000013541	LARP1B	98	82.675	ENSTSYG00000002037	-	93	82.675	Carlito_syrichta
ENSCATG00000013541	LARP1B	76	89.583	ENSCPOG00000034668	-	94	89.262	Cavia_porcellus
ENSCATG00000013541	LARP1B	100	95.174	ENSCCAG00000021948	LARP1B	100	95.174	Cebus_capucinus
ENSCATG00000013541	LARP1B	100	84.776	ENSCLAG00000006448	-	100	84.776	Chinchilla_lanigera
ENSCATG00000013541	LARP1B	100	97.489	ENSCSAG00000003582	LARP1B	100	97.489	Chlorocebus_sabaeus
ENSCATG00000013541	LARP1B	100	80.349	ENSCHOG00000005354	LARP1B	99	80.240	Choloepus_hoffmanni
ENSCATG00000013541	LARP1B	99	76.258	ENSCPBG00000017480	LARP1B	86	76.477	Chrysemys_picta_bellii
ENSCATG00000013541	LARP1B	100	91.948	ENSCANG00000026958	LARP1B	100	91.948	Colobus_angolensis_palliatus
ENSCATG00000013541	LARP1B	100	87.164	ENSCGRG00001004660	-	100	87.164	Cricetulus_griseus_chok1gshd
ENSCATG00000013541	LARP1B	100	86.866	ENSCGRG00000001914	-	100	86.866	Cricetulus_griseus_crigri
ENSCATG00000013541	LARP1B	96	52.047	ENSCSEG00000013519	larp1b	85	52.960	Cynoglossus_semilaevis
ENSCATG00000013541	LARP1B	97	54.672	ENSCVAG00000005046	larp1b	82	55.005	Cyprinodon_variegatus
ENSCATG00000013541	LARP1B	98	52.155	ENSDARG00000061169	larp1b	79	53.355	Danio_rerio
ENSCATG00000013541	LARP1B	99	85.575	ENSDNOG00000018765	-	100	85.714	Dasypus_novemcinctus
ENSCATG00000013541	LARP1B	88	84.874	ENSETEG00000012497	LARP1B	89	84.874	Echinops_telfairi
ENSCATG00000013541	LARP1B	94	51.082	ENSEBUG00000003668	larp1b	87	52.000	Eptatretus_burgeri
ENSCATG00000013541	LARP1B	99	89.820	ENSEASG00005018106	LARP1B	99	89.820	Equus_asinus_asinus
ENSCATG00000013541	LARP1B	100	88.074	ENSECAG00000001088	LARP1B	81	88.074	Equus_caballus
ENSCATG00000013541	LARP1B	69	52.727	ENSELUG00000023774	larp1b	77	51.681	Esox_lucius
ENSCATG00000013541	LARP1B	100	88.955	ENSFCAG00000014650	-	100	88.955	Felis_catus
ENSCATG00000013541	LARP1B	100	67.935	ENSFALG00000008098	LARP1B	99	69.130	Ficedula_albicollis
ENSCATG00000013541	LARP1B	98	55.106	ENSFHEG00000010264	larp1b	80	55.272	Fundulus_heteroclitus
ENSCATG00000013541	LARP1B	83	66.327	ENSGMOG00000005207	larp1b	62	68.027	Gadus_morhua
ENSCATG00000013541	LARP1B	98	68.537	ENSGALG00000010207	LARP1B	87	68.537	Gallus_gallus
ENSCATG00000013541	LARP1B	91	57.193	ENSGAFG00000012012	larp1b	93	57.459	Gambusia_affinis
ENSCATG00000013541	LARP1B	97	51.453	ENSGACG00000004609	larp1b	83	53.929	Gasterosteus_aculeatus
ENSCATG00000013541	LARP1B	99	76.201	ENSGAGG00000017209	LARP1B	85	76.419	Gopherus_agassizii
ENSCATG00000013541	LARP1B	100	96.608	ENSGGOG00000015900	LARP1B	100	96.608	Gorilla_gorilla
ENSCATG00000013541	LARP1B	96	55.725	ENSHBUG00000009730	larp1b	82	55.663	Haplochromis_burtoni
ENSCATG00000013541	LARP1B	100	82.301	ENSHGLG00000006728	-	99	83.186	Heterocephalus_glaber_female
ENSCATG00000013541	LARP1B	97	72.086	ENSHGLG00000013922	-	96	70.948	Heterocephalus_glaber_female
ENSCATG00000013541	LARP1B	97	72.086	ENSHGLG00100016491	-	96	70.948	Heterocephalus_glaber_male
ENSCATG00000013541	LARP1B	100	83.582	ENSHGLG00100014041	-	96	83.582	Heterocephalus_glaber_male
ENSCATG00000013541	LARP1B	75	58.582	ENSHCOG00000000918	larp1b	96	59.291	Hippocampus_comes
ENSCATG00000013541	LARP1B	87	58.263	ENSIPUG00000012138	larp1b	80	54.487	Ictalurus_punctatus
ENSCATG00000013541	LARP1B	94	73.927	ENSSTOG00000034510	-	87	72.581	Ictidomys_tridecemlineatus
ENSCATG00000013541	LARP1B	99	77.644	ENSSTOG00000021917	-	94	77.039	Ictidomys_tridecemlineatus
ENSCATG00000013541	LARP1B	100	87.798	ENSSTOG00000008596	-	100	87.798	Ictidomys_tridecemlineatus
ENSCATG00000013541	LARP1B	91	63.934	ENSSTOG00000033183	-	97	62.963	Ictidomys_tridecemlineatus
ENSCATG00000013541	LARP1B	99	83.483	ENSJJAG00000022360	Larp1b	99	83.483	Jaculus_jaculus
ENSCATG00000013541	LARP1B	95	53.897	ENSKMAG00000011589	larp1b	84	54.744	Kryptolebias_marmoratus
ENSCATG00000013541	LARP1B	97	55.663	ENSLBEG00000005655	larp1b	83	55.353	Labrus_bergylta
ENSCATG00000013541	LARP1B	99	70.957	ENSLACG00000015247	LARP1B	100	67.430	Latimeria_chalumnae
ENSCATG00000013541	LARP1B	99	63.474	ENSLOCG00000010684	larp1b	93	64.805	Lepisosteus_oculatus
ENSCATG00000013541	LARP1B	99	88.690	ENSLAFG00000008473	-	99	88.690	Loxodonta_africana
ENSCATG00000013541	LARP1B	100	98.248	ENSMFAG00000002218	LARP1B	100	98.248	Macaca_fascicularis
ENSCATG00000013541	LARP1B	69	93.258	ENSMFAG00000003306	-	94	93.258	Macaca_fascicularis
ENSCATG00000013541	LARP1B	100	98.248	ENSMMUG00000021347	LARP1B	100	98.248	Macaca_mulatta
ENSCATG00000013541	LARP1B	91	100.000	ENSMNEG00000030406	LARP1B	100	100.000	Macaca_nemestrina
ENSCATG00000013541	LARP1B	64	94.595	ENSMNEG00000027747	-	94	86.713	Macaca_nemestrina
ENSCATG00000013541	LARP1B	100	94.195	ENSMLEG00000009306	LARP1B	100	94.195	Mandrillus_leucophaeus
ENSCATG00000013541	LARP1B	99	55.391	ENSMAMG00000000081	larp1b	85	55.497	Mastacembelus_armatus
ENSCATG00000013541	LARP1B	76	61.119	ENSMZEG00005002545	larp1b	94	59.764	Maylandia_zebra
ENSCATG00000013541	LARP1B	94	62.306	ENSMGAG00000004809	LARP1B	98	62.320	Meleagris_gallopavo
ENSCATG00000013541	LARP1B	100	86.269	ENSMAUG00000007879	-	100	86.269	Mesocricetus_auratus
ENSCATG00000013541	LARP1B	98	69.020	ENSMICG00000028052	-	99	69.368	Microcebus_murinus
ENSCATG00000013541	LARP1B	98	74.320	ENSMICG00000037883	-	90	74.018	Microcebus_murinus
ENSCATG00000013541	LARP1B	100	92.341	ENSMICG00000036111	LARP1B	99	92.341	Microcebus_murinus
ENSCATG00000013541	LARP1B	78	87.452	ENSMOCG00000001490	Larp1b	95	87.452	Microtus_ochrogaster
ENSCATG00000013541	LARP1B	99	84.515	ENSMODG00000012300	LARP1B	81	85.060	Monodelphis_domestica
ENSCATG00000013541	LARP1B	99	55.367	ENSMALG00000003638	larp1b	84	55.940	Monopterus_albus
ENSCATG00000013541	LARP1B	100	85.075	MGP_CAROLIEiJ_G0024962	Larp1b	100	85.075	Mus_caroli
ENSCATG00000013541	LARP1B	100	86.269	ENSMUSG00000025762	Larp1b	100	86.269	Mus_musculus
ENSCATG00000013541	LARP1B	100	85.970	MGP_PahariEiJ_G0026403	Larp1b	100	85.970	Mus_pahari
ENSCATG00000013541	LARP1B	100	86.269	MGP_SPRETEiJ_G0025897	Larp1b	100	86.269	Mus_spretus
ENSCATG00000013541	LARP1B	100	89.168	ENSMPUG00000017365	LARP1B	81	89.168	Mustela_putorius_furo
ENSCATG00000013541	LARP1B	96	81.868	ENSMLUG00000010229	LARP1B	97	81.868	Myotis_lucifugus
ENSCATG00000013541	LARP1B	76	55.747	ENSNBRG00000023846	larp1b	77	54.935	Neolamprologus_brichardi
ENSCATG00000013541	LARP1B	100	96.332	ENSNLEG00000013819	LARP1B	100	96.332	Nomascus_leucogenys
ENSCATG00000013541	LARP1B	87	83.654	ENSMEUG00000010308	LARP1B	88	83.654	Notamacropus_eugenii
ENSCATG00000013541	LARP1B	99	70.197	ENSOPRG00000005478	LARP1B	99	70.415	Ochotona_princeps
ENSCATG00000013541	LARP1B	100	84.478	ENSODEG00000001292	-	100	84.478	Octodon_degus
ENSCATG00000013541	LARP1B	96	55.005	ENSONIG00000012386	larp1b	93	54.870	Oreochromis_niloticus
ENSCATG00000013541	LARP1B	98	89.058	ENSOCUG00000013330	LARP1B	98	86.871	Oryctolagus_cuniculus
ENSCATG00000013541	LARP1B	97	55.255	ENSORLG00000017954	larp1b	82	55.375	Oryzias_latipes
ENSCATG00000013541	LARP1B	97	54.703	ENSORLG00020013081	larp1b	82	54.821	Oryzias_latipes_hni
ENSCATG00000013541	LARP1B	97	55.157	ENSORLG00015009580	larp1b	82	55.157	Oryzias_latipes_hsok
ENSCATG00000013541	LARP1B	97	54.870	ENSOMEG00000004210	larp1b	82	54.978	Oryzias_melastigma
ENSCATG00000013541	LARP1B	99	87.719	ENSOGAG00000005771	LARP1B	98	88.330	Otolemur_garnettii
ENSCATG00000013541	LARP1B	100	87.991	ENSOARG00000015300	LARP1B	100	87.991	Ovis_aries
ENSCATG00000013541	LARP1B	100	96.389	ENSPPAG00000030439	LARP1B	100	96.389	Pan_paniscus
ENSCATG00000013541	LARP1B	100	88.955	ENSPPRG00000002743	-	100	88.955	Panthera_pardus
ENSCATG00000013541	LARP1B	100	88.955	ENSPTIG00000011225	LARP1B	100	88.955	Panthera_tigris_altaica
ENSCATG00000013541	LARP1B	100	96.389	ENSPTRG00000016437	LARP1B	100	96.389	Pan_troglodytes
ENSCATG00000013541	LARP1B	100	98.357	ENSPANG00000012488	LARP1B	100	98.357	Papio_anubis
ENSCATG00000013541	LARP1B	90	52.764	ENSPKIG00000014360	larp1b	88	52.758	Paramormyrops_kingsleyae
ENSCATG00000013541	LARP1B	96	76.731	ENSPSIG00000012885	LARP1B	93	76.163	Pelodiscus_sinensis
ENSCATG00000013541	LARP1B	79	59.010	ENSPMGG00000007207	larp1b	91	57.915	Periophthalmus_magnuspinnatus
ENSCATG00000013541	LARP1B	94	51.549	ENSPMAG00000002700	larp1b	95	54.171	Petromyzon_marinus
ENSCATG00000013541	LARP1B	99	83.551	ENSPCIG00000026516	LARP1B	98	83.824	Phascolarctos_cinereus
ENSCATG00000013541	LARP1B	98	49.908	ENSPFOG00000022837	-	78	49.725	Poecilia_formosa
ENSCATG00000013541	LARP1B	97	55.310	ENSPFOG00000019519	larp1b	82	55.100	Poecilia_formosa
ENSCATG00000013541	LARP1B	97	56.446	ENSPLAG00000007115	larp1b	82	56.121	Poecilia_latipinna
ENSCATG00000013541	LARP1B	97	56.230	ENSPMEG00000001224	larp1b	81	56.013	Poecilia_mexicana
ENSCATG00000013541	LARP1B	79	52.797	ENSPREG00000005955	-	89	52.448	Poecilia_reticulata
ENSCATG00000013541	LARP1B	100	83.716	ENSPCAG00000007546	LARP1B	99	83.716	Procavia_capensis
ENSCATG00000013541	LARP1B	100	90.149	ENSPCOG00000021874	LARP1B	99	93.793	Propithecus_coquereli
ENSCATG00000013541	LARP1B	100	82.366	ENSPVAG00000005373	LARP1B	99	82.366	Pteropus_vampyrus
ENSCATG00000013541	LARP1B	76	61.063	ENSPNYG00000017357	larp1b	94	59.764	Pundamilia_nyererei
ENSCATG00000013541	LARP1B	95	52.859	ENSPNAG00000008823	larp1b	84	54.429	Pygocentrus_nattereri
ENSCATG00000013541	LARP1B	100	87.463	ENSRNOG00000038366	Larp1b	100	87.463	Rattus_norvegicus
ENSCATG00000013541	LARP1B	100	95.367	ENSRBIG00000039982	-	100	95.367	Rhinopithecus_bieti
ENSCATG00000013541	LARP1B	100	86.866	ENSRBIG00000038568	-	92	86.866	Rhinopithecus_bieti
ENSCATG00000013541	LARP1B	100	76.716	ENSRROG00000038525	-	96	76.716	Rhinopithecus_roxellana
ENSCATG00000013541	LARP1B	100	97.809	ENSRROG00000030771	LARP1B	100	97.809	Rhinopithecus_roxellana
ENSCATG00000013541	LARP1B	99	83.658	ENSSHAG00000014474	LARP1B	100	83.881	Sarcophilus_harrisii
ENSCATG00000013541	LARP1B	96	55.135	ENSSMAG00000006347	larp1b	91	54.797	Scophthalmus_maximus
ENSCATG00000013541	LARP1B	96	56.161	ENSSDUG00000004182	larp1b	82	55.914	Seriola_dumerili
ENSCATG00000013541	LARP1B	78	59.167	ENSSLDG00000014613	larp1b	78	55.834	Seriola_lalandi_dorsalis
ENSCATG00000013541	LARP1B	98	72.515	ENSSPUG00000011837	LARP1B	97	67.694	Sphenodon_punctatus
ENSCATG00000013541	LARP1B	97	55.603	ENSSPAG00000017772	larp1b	83	55.198	Stegastes_partitus
ENSCATG00000013541	LARP1B	72	52.066	ENSSSCG00000040491	-	99	75.862	Sus_scrofa
ENSCATG00000013541	LARP1B	100	86.761	ENSSSCG00000034280	LARP1B	99	93.814	Sus_scrofa
ENSCATG00000013541	LARP1B	89	69.390	ENSTGUG00000002098	-	96	66.553	Taeniopygia_guttata
ENSCATG00000013541	LARP1B	98	53.217	ENSTRUG00000005612	larp1b	82	53.268	Takifugu_rubripes
ENSCATG00000013541	LARP1B	96	52.710	ENSTNIG00000012398	larp1b	94	53.609	Tetraodon_nigroviridis
ENSCATG00000013541	LARP1B	87	90.385	ENSTBEG00000004177	LARP1B	88	84.615	Tupaia_belangeri
ENSCATG00000013541	LARP1B	100	79.126	ENSTTRG00000012984	LARP1B	99	79.126	Tursiops_truncatus
ENSCATG00000013541	LARP1B	100	78.507	ENSUAMG00000016938	-	100	77.976	Ursus_americanus
ENSCATG00000013541	LARP1B	100	89.606	ENSUMAG00000007373	LARP1B	98	89.606	Ursus_maritimus
ENSCATG00000013541	LARP1B	99	77.148	ENSVPAG00000007223	LARP1B	99	76.932	Vicugna_pacos
ENSCATG00000013541	LARP1B	100	89.825	ENSVVUG00000011307	LARP1B	100	88.824	Vulpes_vulpes
ENSCATG00000013541	LARP1B	97	60.354	ENSXETG00000022512	larp1b	87	60.244	Xenopus_tropicalis
ENSCATG00000013541	LARP1B	73	58.012	ENSXCOG00000004435	larp1b	68	58.358	Xiphophorus_couchianus
ENSCATG00000013541	LARP1B	97	55.806	ENSXMAG00000008150	larp1b	81	55.940	Xiphophorus_maculatus