EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000015580 (Gene tree)
Gene ID: 105593940
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 2571 bases
Position: chrKQ010462.1:1688948-1691518
Accession: 105593940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000004453	Exo_endo_phos	PF03372.23	7.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000017807	APEX1-202	45	-	ENSCATP00000004460	14 (aa)	-	A0A2K5KUU4
ENSCATT00000017794	APEX1-201	1550	XM_012077576	ENSCATP00000004453	318 (aa)	XP_011932966	A0A2K5KUU2

Gene Model

Click here to download ENSCATG00000015580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000015580's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000015580	APEX1	100	98.428	ENSG00000100823	APEX1	100	98.428	Homo_sapiens
ENSCATG00000015580	APEX1	88	69.176	ENSAPOG00000017002	apex1	95	67.931	Acanthochromis_polyacanthus
ENSCATG00000015580	APEX1	100	95.283	ENSAMEG00000005418	APEX1	100	95.283	Ailuropoda_melanoleuca
ENSCATG00000015580	APEX1	87	70.863	ENSACIG00000010653	apex1	97	69.896	Amphilophus_citrinellus
ENSCATG00000015580	APEX1	88	69.176	ENSAOCG00000009649	apex1	94	67.931	Amphiprion_ocellaris
ENSCATG00000015580	APEX1	88	69.176	ENSAPEG00000021453	apex1	94	67.931	Amphiprion_percula
ENSCATG00000015580	APEX1	86	70.803	ENSATEG00000002883	apex1	97	66.456	Anabas_testudineus
ENSCATG00000015580	APEX1	100	69.876	ENSACAG00000008099	APEX1	100	69.876	Anolis_carolinensis
ENSCATG00000015580	APEX1	100	97.799	ENSANAG00000030117	APEX1	100	97.799	Aotus_nancymaae
ENSCATG00000015580	APEX1	86	71.636	ENSACLG00000018441	apex1	99	67.089	Astatotilapia_calliptera
ENSCATG00000015580	APEX1	100	65.312	ENSAMXG00000034699	apex1	100	65.312	Astyanax_mexicanus
ENSCATG00000015580	APEX1	100	93.396	ENSBTAG00000002745	APEX1	100	93.396	Bos_taurus
ENSCATG00000015580	APEX1	80	44.531	WBGene00001372	exo-3	88	44.531	Caenorhabditis_elegans
ENSCATG00000015580	APEX1	100	98.113	ENSCJAG00000009726	APEX1	100	98.113	Callithrix_jacchus
ENSCATG00000015580	APEX1	100	94.654	ENSCAFG00000032033	APEX1	100	94.654	Canis_familiaris
ENSCATG00000015580	APEX1	100	94.654	ENSCAFG00020014377	-	100	94.654	Canis_lupus_dingo
ENSCATG00000015580	APEX1	54	90.698	ENSCAFG00020023002	-	96	90.698	Canis_lupus_dingo
ENSCATG00000015580	APEX1	100	92.767	ENSCHIG00000007298	-	100	92.767	Capra_hircus
ENSCATG00000015580	APEX1	98	74.359	ENSCHIG00000014537	-	99	74.359	Capra_hircus
ENSCATG00000015580	APEX1	100	94.340	ENSTSYG00000034813	APEX1	100	94.340	Carlito_syrichta
ENSCATG00000015580	APEX1	85	88.192	ENSCAPG00000016235	APEX1	91	97.034	Cavia_aperea
ENSCATG00000015580	APEX1	100	94.025	ENSCPOG00000030909	APEX1	100	94.025	Cavia_porcellus
ENSCATG00000015580	APEX1	100	84.906	ENSCCAG00000031931	-	100	84.906	Cebus_capucinus
ENSCATG00000015580	APEX1	100	98.113	ENSCCAG00000033056	-	100	98.113	Cebus_capucinus
ENSCATG00000015580	APEX1	100	94.969	ENSCLAG00000001002	APEX1	100	94.969	Chinchilla_lanigera
ENSCATG00000015580	APEX1	100	99.686	ENSCSAG00000016685	-	100	99.686	Chlorocebus_sabaeus
ENSCATG00000015580	APEX1	100	99.686	ENSCSAG00000016670	-	100	99.686	Chlorocebus_sabaeus
ENSCATG00000015580	APEX1	100	72.100	ENSCPBG00000009567	APEX1	100	72.100	Chrysemys_picta_bellii
ENSCATG00000015580	APEX1	91	54.915	ENSCING00000008137	-	94	54.915	Ciona_intestinalis
ENSCATG00000015580	APEX1	83	52.075	ENSCSAVG00000007144	-	100	52.896	Ciona_savignyi
ENSCATG00000015580	APEX1	100	99.371	ENSCANG00000030726	APEX1	100	99.371	Colobus_angolensis_palliatus
ENSCATG00000015580	APEX1	100	92.138	ENSCGRG00001017046	Apex1	100	92.138	Cricetulus_griseus_chok1gshd
ENSCATG00000015580	APEX1	100	92.138	ENSCGRG00000008984	Apex1	100	92.138	Cricetulus_griseus_crigri
ENSCATG00000015580	APEX1	99	64.780	ENSCSEG00000017499	apex1	99	64.780	Cynoglossus_semilaevis
ENSCATG00000015580	APEX1	88	70.609	ENSCVAG00000022075	apex1	99	65.506	Cyprinodon_variegatus
ENSCATG00000015580	APEX1	100	65.723	ENSDARG00000045843	apex1	100	65.723	Danio_rerio
ENSCATG00000015580	APEX1	100	89.308	ENSDNOG00000042234	APEX1	95	89.308	Dasypus_novemcinctus
ENSCATG00000015580	APEX1	100	94.025	ENSDORG00000001616	Apex1	100	94.025	Dipodomys_ordii
ENSCATG00000015580	APEX1	100	93.396	ENSETEG00000004855	-	100	93.396	Echinops_telfairi
ENSCATG00000015580	APEX1	75	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSCATG00000015580	APEX1	100	95.912	ENSEASG00005017489	APEX1	74	95.912	Equus_asinus_asinus
ENSCATG00000015580	APEX1	100	95.912	ENSECAG00000022325	APEX1	82	95.912	Equus_caballus
ENSCATG00000015580	APEX1	91	93.403	ENSEEUG00000012569	APEX1	100	93.403	Erinaceus_europaeus
ENSCATG00000015580	APEX1	100	65.204	ENSELUG00000021706	apex1	100	65.204	Esox_lucius
ENSCATG00000015580	APEX1	100	95.912	ENSFCAG00000030869	APEX1	100	95.912	Felis_catus
ENSCATG00000015580	APEX1	100	93.082	ENSFDAG00000006120	APEX1	100	93.082	Fukomys_damarensis
ENSCATG00000015580	APEX1	99	67.089	ENSFHEG00000009031	apex1	83	67.089	Fundulus_heteroclitus
ENSCATG00000015580	APEX1	99	62.579	ENSGMOG00000007943	apex1	99	62.579	Gadus_morhua
ENSCATG00000015580	APEX1	99	66.772	ENSGAFG00000005311	apex1	99	66.772	Gambusia_affinis
ENSCATG00000015580	APEX1	99	64.557	ENSGACG00000019497	apex1	99	68.797	Gasterosteus_aculeatus
ENSCATG00000015580	APEX1	100	71.473	ENSGAGG00000014999	APEX1	100	71.473	Gopherus_agassizii
ENSCATG00000015580	APEX1	100	98.742	ENSGGOG00000002128	APEX1	100	98.742	Gorilla_gorilla
ENSCATG00000015580	APEX1	99	65.823	ENSHBUG00000005894	apex1	99	67.089	Haplochromis_burtoni
ENSCATG00000015580	APEX1	100	94.025	ENSHGLG00000002848	APEX1	100	94.025	Heterocephalus_glaber_female
ENSCATG00000015580	APEX1	100	94.025	ENSHGLG00100017878	APEX1	100	94.025	Heterocephalus_glaber_male
ENSCATG00000015580	APEX1	99	65.831	ENSHCOG00000009961	apex1	99	65.831	Hippocampus_comes
ENSCATG00000015580	APEX1	100	67.398	ENSIPUG00000005799	apex1	100	67.398	Ictalurus_punctatus
ENSCATG00000015580	APEX1	100	93.711	ENSSTOG00000010096	APEX1	100	93.711	Ictidomys_tridecemlineatus
ENSCATG00000015580	APEX1	100	79.874	ENSJJAG00000020465	-	96	83.893	Jaculus_jaculus
ENSCATG00000015580	APEX1	100	93.711	ENSJJAG00000012067	-	100	93.711	Jaculus_jaculus
ENSCATG00000015580	APEX1	100	83.962	ENSJJAG00000003660	-	100	83.962	Jaculus_jaculus
ENSCATG00000015580	APEX1	88	70.968	ENSKMAG00000021171	apex1	99	65.823	Kryptolebias_marmoratus
ENSCATG00000015580	APEX1	88	68.100	ENSLBEG00000010248	apex1	99	63.898	Labrus_bergylta
ENSCATG00000015580	APEX1	100	66.667	ENSLACG00000008617	APEX1	100	66.667	Latimeria_chalumnae
ENSCATG00000015580	APEX1	100	66.667	ENSLOCG00000015516	apex1	99	66.667	Lepisosteus_oculatus
ENSCATG00000015580	APEX1	100	94.025	ENSLAFG00000021872	APEX1	100	94.025	Loxodonta_africana
ENSCATG00000015580	APEX1	100	99.371	ENSMFAG00000002565	APEX1	100	99.371	Macaca_fascicularis
ENSCATG00000015580	APEX1	100	99.686	ENSMMUG00000048039	APEX1	100	99.686	Macaca_mulatta
ENSCATG00000015580	APEX1	100	99.686	ENSMNEG00000036944	APEX1	100	99.686	Macaca_nemestrina
ENSCATG00000015580	APEX1	100	100.000	ENSMLEG00000042125	APEX1	100	100.000	Mandrillus_leucophaeus
ENSCATG00000015580	APEX1	88	70.968	ENSMAMG00000023526	apex1	99	66.139	Mastacembelus_armatus
ENSCATG00000015580	APEX1	86	71.636	ENSMZEG00005014187	apex1	99	67.089	Maylandia_zebra
ENSCATG00000015580	APEX1	100	93.082	ENSMAUG00000013994	Apex1	100	93.082	Mesocricetus_auratus
ENSCATG00000015580	APEX1	100	95.283	ENSMICG00000043554	APEX1	100	95.283	Microcebus_murinus
ENSCATG00000015580	APEX1	100	91.824	ENSMOCG00000013721	Apex1	100	91.824	Microtus_ochrogaster
ENSCATG00000015580	APEX1	88	67.143	ENSMMOG00000010031	apex1	97	62.696	Mola_mola
ENSCATG00000015580	APEX1	100	83.125	ENSMODG00000007125	APEX1	100	84.783	Monodelphis_domestica
ENSCATG00000015580	APEX1	88	63.799	ENSMALG00000011699	apex1	79	62.457	Monopterus_albus
ENSCATG00000015580	APEX1	99	93.691	MGP_CAROLIEiJ_G0019209	Apex1	99	93.691	Mus_caroli
ENSCATG00000015580	APEX1	100	94.340	ENSMUSG00000035960	Apex1	100	94.340	Mus_musculus
ENSCATG00000015580	APEX1	100	94.340	MGP_PahariEiJ_G0030232	Apex1	100	94.340	Mus_pahari
ENSCATG00000015580	APEX1	100	94.340	MGP_SPRETEiJ_G0020101	Apex1	100	94.340	Mus_spretus
ENSCATG00000015580	APEX1	100	93.750	ENSMLUG00000028957	APEX1	100	93.750	Myotis_lucifugus
ENSCATG00000015580	APEX1	100	69.811	ENSNGAG00000021748	-	99	69.811	Nannospalax_galili
ENSCATG00000015580	APEX1	100	92.767	ENSNGAG00000002725	-	100	92.767	Nannospalax_galili
ENSCATG00000015580	APEX1	86	71.636	ENSNBRG00000005334	apex1	91	67.089	Neolamprologus_brichardi
ENSCATG00000015580	APEX1	100	98.428	ENSNLEG00000010839	APEX1	100	98.428	Nomascus_leucogenys
ENSCATG00000015580	APEX1	100	86.792	ENSMEUG00000014519	APEX1	100	86.792	Notamacropus_eugenii
ENSCATG00000015580	APEX1	100	93.082	ENSOPRG00000014029	APEX1	100	93.082	Ochotona_princeps
ENSCATG00000015580	APEX1	100	94.340	ENSODEG00000001703	-	100	94.340	Octodon_degus
ENSCATG00000015580	APEX1	100	71.914	ENSODEG00000006583	-	100	71.914	Octodon_degus
ENSCATG00000015580	APEX1	97	74.757	ENSODEG00000004777	-	99	74.757	Octodon_degus
ENSCATG00000015580	APEX1	87	71.583	ENSONIG00000012089	apex1	99	67.405	Oreochromis_niloticus
ENSCATG00000015580	APEX1	90	82.456	ENSOANG00000008836	APEX1	80	78.395	Ornithorhynchus_anatinus
ENSCATG00000015580	APEX1	100	94.654	ENSOCUG00000005022	APEX1	100	94.654	Oryctolagus_cuniculus
ENSCATG00000015580	APEX1	99	66.352	ENSORLG00000012378	apex1	99	66.352	Oryzias_latipes
ENSCATG00000015580	APEX1	99	66.352	ENSORLG00020021371	apex1	99	66.352	Oryzias_latipes_hni
ENSCATG00000015580	APEX1	99	66.352	ENSORLG00015020089	apex1	99	66.352	Oryzias_latipes_hsok
ENSCATG00000015580	APEX1	99	66.352	ENSOMEG00000018876	apex1	99	66.352	Oryzias_melastigma
ENSCATG00000015580	APEX1	98	83.974	ENSOGAG00000029355	-	100	83.974	Otolemur_garnettii
ENSCATG00000015580	APEX1	100	94.654	ENSOGAG00000013335	-	100	94.654	Otolemur_garnettii
ENSCATG00000015580	APEX1	100	91.824	ENSOARG00000019740	-	100	91.824	Ovis_aries
ENSCATG00000015580	APEX1	97	88.961	ENSOARG00000001876	-	100	88.961	Ovis_aries
ENSCATG00000015580	APEX1	99	77.848	ENSOARG00000014424	-	100	77.848	Ovis_aries
ENSCATG00000015580	APEX1	100	98.742	ENSPPAG00000038760	APEX1	100	98.742	Pan_paniscus
ENSCATG00000015580	APEX1	100	96.226	ENSPPRG00000011794	APEX1	100	96.226	Panthera_pardus
ENSCATG00000015580	APEX1	100	95.912	ENSPTIG00000014829	APEX1	100	95.912	Panthera_tigris_altaica
ENSCATG00000015580	APEX1	100	98.742	ENSPTRG00000006093	APEX1	100	98.742	Pan_troglodytes
ENSCATG00000015580	APEX1	100	100.000	ENSPANG00000022757	APEX1	100	100.000	Papio_anubis
ENSCATG00000015580	APEX1	87	68.231	ENSPKIG00000003504	apex1	100	64.486	Paramormyrops_kingsleyae
ENSCATG00000015580	APEX1	76	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSCATG00000015580	APEX1	100	93.711	ENSPEMG00000019097	Apex1	100	93.711	Peromyscus_maniculatus_bairdii
ENSCATG00000015580	APEX1	94	66.000	ENSPMAG00000007275	-	99	66.000	Petromyzon_marinus
ENSCATG00000015580	APEX1	100	83.699	ENSPCIG00000023274	APEX1	100	84.735	Phascolarctos_cinereus
ENSCATG00000015580	APEX1	88	71.685	ENSPFOG00000004178	apex1	99	66.772	Poecilia_formosa
ENSCATG00000015580	APEX1	88	71.326	ENSPLAG00000012779	apex1	99	66.456	Poecilia_latipinna
ENSCATG00000015580	APEX1	88	71.685	ENSPMEG00000019623	apex1	99	66.772	Poecilia_mexicana
ENSCATG00000015580	APEX1	88	70.968	ENSPREG00000014298	apex1	99	66.139	Poecilia_reticulata
ENSCATG00000015580	APEX1	100	98.113	ENSPPYG00000005565	APEX1	100	98.113	Pongo_abelii
ENSCATG00000015580	APEX1	100	92.453	ENSPCAG00000010376	APEX1	100	92.453	Procavia_capensis
ENSCATG00000015580	APEX1	100	95.283	ENSPCOG00000021564	APEX1	100	95.283	Propithecus_coquereli
ENSCATG00000015580	APEX1	100	95.000	ENSPVAG00000010736	APEX1	100	95.000	Pteropus_vampyrus
ENSCATG00000015580	APEX1	86	71.636	ENSPNYG00000023940	apex1	99	67.089	Pundamilia_nyererei
ENSCATG00000015580	APEX1	93	65.541	ENSPNAG00000020897	apex1	96	65.424	Pygocentrus_nattereri
ENSCATG00000015580	APEX1	100	93.396	ENSRNOG00000009663	Apex1	100	93.396	Rattus_norvegicus
ENSCATG00000015580	APEX1	100	99.371	ENSRBIG00000038325	APEX1	99	99.371	Rhinopithecus_bieti
ENSCATG00000015580	APEX1	100	82.704	ENSSBOG00000031372	-	100	82.704	Saimiri_boliviensis_boliviensis
ENSCATG00000015580	APEX1	100	97.799	ENSSBOG00000018921	-	100	97.799	Saimiri_boliviensis_boliviensis
ENSCATG00000015580	APEX1	100	83.333	ENSSHAG00000013524	APEX1	100	84.356	Sarcophilus_harrisii
ENSCATG00000015580	APEX1	87	66.065	ENSSFOG00015001948	apex1	100	62.264	Scleropages_formosus
ENSCATG00000015580	APEX1	87	69.065	ENSSMAG00000013348	apex1	99	64.984	Scophthalmus_maximus
ENSCATG00000015580	APEX1	88	69.176	ENSSDUG00000016377	apex1	99	64.873	Seriola_dumerili
ENSCATG00000015580	APEX1	88	70.609	ENSSLDG00000023005	apex1	99	66.139	Seriola_lalandi_dorsalis
ENSCATG00000015580	APEX1	93	71.186	ENSSPUG00000000531	APEX1	99	71.186	Sphenodon_punctatus
ENSCATG00000015580	APEX1	88	69.892	ENSSPAG00000000458	apex1	96	67.918	Stegastes_partitus
ENSCATG00000015580	APEX1	100	94.025	ENSSSCG00000040060	-	100	94.025	Sus_scrofa
ENSCATG00000015580	APEX1	96	56.129	ENSSSCG00000039705	-	99	57.947	Sus_scrofa
ENSCATG00000015580	APEX1	74	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSCATG00000015580	APEX1	87	67.986	ENSTRUG00000004268	apex1	95	63.924	Takifugu_rubripes
ENSCATG00000015580	APEX1	99	62.975	ENSTNIG00000005778	apex1	99	62.975	Tetraodon_nigroviridis
ENSCATG00000015580	APEX1	100	91.509	ENSTBEG00000006405	APEX1	100	91.509	Tupaia_belangeri
ENSCATG00000015580	APEX1	74	94.915	ENSTTRG00000007860	APEX1	100	94.915	Tursiops_truncatus
ENSCATG00000015580	APEX1	100	94.969	ENSUAMG00000010457	APEX1	100	94.969	Ursus_americanus
ENSCATG00000015580	APEX1	100	94.969	ENSUMAG00000009178	APEX1	100	94.969	Ursus_maritimus
ENSCATG00000015580	APEX1	74	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSCATG00000015580	APEX1	100	94.340	ENSVVUG00000009010	APEX1	100	94.340	Vulpes_vulpes
ENSCATG00000015580	APEX1	100	64.087	ENSXETG00000024773	apex1	100	66.254	Xenopus_tropicalis
ENSCATG00000015580	APEX1	88	71.326	ENSXCOG00000015233	apex1	99	66.456	Xiphophorus_couchianus
ENSCATG00000015580	APEX1	88	71.326	ENSXMAG00000006195	apex1	99	66.456	Xiphophorus_maculatus