EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000016595 (Gene tree)
Gene ID: 105593447
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 8090 bases
Position: chrKQ010367.1:10199331-10207420
Accession: 105593447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000004879	RNA_pol_L_2	PF13656.6	6.3e-22	1	1
ENSCATP00000004886	RNA_pol_L_2	PF13656.6	3.6e-18	1	1
ENSCATP00000004879	RNA_pol_L	PF01193.24	1.5e-06	1	1
ENSCATP00000004886	RNA_pol_L	PF01193.24	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000018961	-	264	-	ENSCATP00000004886	87 (aa)	-	A0A2K5KW24
ENSCATT00000018953	-	631	XM_012076575	ENSCATP00000004879	95 (aa)	XP_011931965	A0A2K5KVZ7

Gene Model

Click here to download ENSCATG00000016595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000016595's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000016595	-	77	34.247	ENSCATG00000022900	-	57	34.247
ENSCATG00000016595	-	86	36.585	ENSCATG00000030710	-	59	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000016595	-	96	84.615	ENSG00000005075	POLR2J	100	74.359	Homo_sapiens
ENSCATG00000016595	-	73	95.652	ENSG00000228049	POLR2J2	94	69.444	Homo_sapiens
ENSCATG00000016595	-	97	85.870	ENSAPOG00000019538	polr2j	100	73.504	Acanthochromis_polyacanthus
ENSCATG00000016595	-	97	77.451	ENSAMEG00000015480	-	100	68.504	Ailuropoda_melanoleuca
ENSCATG00000016595	-	88	55.294	ENSACIG00000014549	POLR2J2	91	49.091	Amphilophus_citrinellus
ENSCATG00000016595	-	96	83.516	ENSAOCG00000006937	polr2j	100	72.650	Amphiprion_ocellaris
ENSCATG00000016595	-	97	85.870	ENSAPEG00000021761	polr2j	100	73.504	Amphiprion_percula
ENSCATG00000016595	-	97	85.870	ENSATEG00000013312	-	100	73.504	Anabas_testudineus
ENSCATG00000016595	-	97	85.870	ENSATEG00000009731	polr2j	100	73.504	Anabas_testudineus
ENSCATG00000016595	-	97	85.870	ENSAPLG00000003744	-	88	85.870	Anas_platyrhynchos
ENSCATG00000016595	-	96	76.923	ENSACAG00000000251	POLR2J	100	68.376	Anolis_carolinensis
ENSCATG00000016595	-	97	85.870	ENSACLG00000014564	polr2j	100	73.504	Astatotilapia_calliptera
ENSCATG00000016595	-	96	84.615	ENSAMXG00000007517	polr2j	100	73.504	Astyanax_mexicanus
ENSCATG00000016595	-	88	59.524	WBGene00012187	rpb-11	89	50.459	Caenorhabditis_elegans
ENSCATG00000016595	-	100	100.000	ENSCJAG00000016203	-	100	100.000	Callithrix_jacchus
ENSCATG00000016595	-	96	84.615	ENSCAFG00000013683	-	100	74.359	Canis_familiaris
ENSCATG00000016595	-	96	84.615	ENSTSYG00000029243	-	77	84.615	Carlito_syrichta
ENSCATG00000016595	-	96	84.615	ENSCPOG00000001401	-	100	74.359	Cavia_porcellus
ENSCATG00000016595	-	96	84.615	ENSCLAG00000005238	-	100	74.359	Chinchilla_lanigera
ENSCATG00000016595	-	96	84.615	ENSCSAG00000018092	-	100	74.359	Chlorocebus_sabaeus
ENSCATG00000016595	-	86	78.049	ENSCING00000020531	-	100	62.393	Ciona_intestinalis
ENSCATG00000016595	-	86	78.049	ENSCSAVG00000006948	-	100	62.393	Ciona_savignyi
ENSCATG00000016595	-	100	98.851	ENSCGRG00001012814	Polr2j	100	98.851	Cricetulus_griseus_chok1gshd
ENSCATG00000016595	-	96	64.835	ENSCGRG00000008433	Polr2j	100	58.974	Cricetulus_griseus_crigri
ENSCATG00000016595	-	97	83.696	ENSCSEG00000020352	polr2j	100	72.650	Cynoglossus_semilaevis
ENSCATG00000016595	-	96	83.516	ENSCVAG00000014267	polr2j	100	72.650	Cyprinodon_variegatus
ENSCATG00000016595	-	96	83.516	ENSDARG00000035146	polr2j	100	72.650	Danio_rerio
ENSCATG00000016595	-	100	100.000	ENSDORG00000005934	Polr2j	100	100.000	Dipodomys_ordii
ENSCATG00000016595	-	85	75.309	FBgn0032634	Rpb11	98	60.870	Drosophila_melanogaster
ENSCATG00000016595	-	100	86.207	ENSEBUG00000016100	polr2j	100	86.207	Eptatretus_burgeri
ENSCATG00000016595	-	96	84.615	ENSEASG00005016864	-	100	74.359	Equus_asinus_asinus
ENSCATG00000016595	-	96	84.615	ENSELUG00000012822	polr2j	100	73.504	Esox_lucius
ENSCATG00000016595	-	96	84.615	ENSFCAG00000000377	-	100	74.359	Felis_catus
ENSCATG00000016595	-	96	84.615	ENSFALG00000009523	POLR2J	100	74.359	Ficedula_albicollis
ENSCATG00000016595	-	96	84.615	ENSFDAG00000010507	-	100	74.359	Fukomys_damarensis
ENSCATG00000016595	-	97	85.870	ENSFHEG00000006625	polr2j	100	73.504	Fundulus_heteroclitus
ENSCATG00000016595	-	96	83.516	ENSGMOG00000018207	polr2j	100	72.650	Gadus_morhua
ENSCATG00000016595	-	96	84.615	ENSGALG00000030808	-	100	74.359	Gallus_gallus
ENSCATG00000016595	-	97	85.870	ENSGAFG00000019555	polr2j	100	73.504	Gambusia_affinis
ENSCATG00000016595	-	97	85.870	ENSGACG00000003310	polr2j	100	73.504	Gasterosteus_aculeatus
ENSCATG00000016595	-	97	85.870	ENSGAGG00000018304	-	81	85.870	Gopherus_agassizii
ENSCATG00000016595	-	97	81.522	ENSGGOG00000004519	-	71	81.522	Gorilla_gorilla
ENSCATG00000016595	-	97	85.870	ENSHBUG00000008467	polr2j	100	73.504	Haplochromis_burtoni
ENSCATG00000016595	-	100	100.000	ENSHGLG00000013598	POLR2J	100	100.000	Heterocephalus_glaber_female
ENSCATG00000016595	-	100	100.000	ENSHGLG00100011242	POLR2J	100	100.000	Heterocephalus_glaber_male
ENSCATG00000016595	-	97	85.870	ENSHCOG00000014827	polr2j	68	73.504	Hippocampus_comes
ENSCATG00000016595	-	96	84.615	ENSIPUG00000023960	polr2j	100	73.504	Ictalurus_punctatus
ENSCATG00000016595	-	100	100.000	ENSSTOG00000006377	POLR2J	100	100.000	Ictidomys_tridecemlineatus
ENSCATG00000016595	-	100	100.000	ENSJJAG00000013854	-	100	100.000	Jaculus_jaculus
ENSCATG00000016595	-	87	85.542	ENSJJAG00000018834	-	100	70.085	Jaculus_jaculus
ENSCATG00000016595	-	97	85.870	ENSKMAG00000014581	polr2j	79	73.504	Kryptolebias_marmoratus
ENSCATG00000016595	-	97	85.870	ENSLBEG00000005885	polr2j	100	73.504	Labrus_bergylta
ENSCATG00000016595	-	97	85.870	ENSLOCG00000001885	polr2j	89	73.504	Lepisosteus_oculatus
ENSCATG00000016595	-	96	84.615	ENSLAFG00000021507	-	100	74.359	Loxodonta_africana
ENSCATG00000016595	-	100	100.000	ENSMMUG00000012019	POLR2J	100	100.000	Macaca_mulatta
ENSCATG00000016595	-	97	85.870	ENSMAMG00000009374	polr2j	100	73.504	Mastacembelus_armatus
ENSCATG00000016595	-	97	85.870	ENSMZEG00005011932	polr2j	100	73.504	Maylandia_zebra
ENSCATG00000016595	-	96	84.615	ENSMGAG00000003534	POLR2J	100	74.359	Meleagris_gallopavo
ENSCATG00000016595	-	100	98.851	ENSMAUG00000013049	Polr2j	100	98.851	Mesocricetus_auratus
ENSCATG00000016595	-	86	80.488	ENSMICG00000026811	-	81	80.488	Microcebus_murinus
ENSCATG00000016595	-	100	100.000	ENSMOCG00000001294	Polr2j	100	100.000	Microtus_ochrogaster
ENSCATG00000016595	-	96	83.516	ENSMMOG00000013265	polr2j	100	72.650	Mola_mola
ENSCATG00000016595	-	97	76.699	ENSMODG00000013617	-	100	67.969	Monodelphis_domestica
ENSCATG00000016595	-	97	85.870	ENSMALG00000020749	polr2j	100	73.504	Monopterus_albus
ENSCATG00000016595	-	100	98.851	MGP_CAROLIEiJ_G0027851	Polr2j	100	98.851	Mus_caroli
ENSCATG00000016595	-	100	100.000	ENSMUSG00000039771	Polr2j	100	100.000	Mus_musculus
ENSCATG00000016595	-	100	98.851	MGP_PahariEiJ_G0024434	Polr2j	100	98.851	Mus_pahari
ENSCATG00000016595	-	100	100.000	MGP_SPRETEiJ_G0028853	Polr2j	100	100.000	Mus_spretus
ENSCATG00000016595	-	96	84.615	ENSMLUG00000010467	POLR2J	100	74.359	Myotis_lucifugus
ENSCATG00000016595	-	100	98.851	ENSNGAG00000023412	Polr2j	100	98.851	Nannospalax_galili
ENSCATG00000016595	-	54	70.588	ENSNBRG00000006580	polr2j	59	60.000	Neolamprologus_brichardi
ENSCATG00000016595	-	96	84.615	ENSODEG00000015648	-	100	74.359	Octodon_degus
ENSCATG00000016595	-	100	65.741	ENSODEG00000008559	-	100	65.741	Octodon_degus
ENSCATG00000016595	-	97	85.870	ENSONIG00000000259	polr2j	100	73.504	Oreochromis_niloticus
ENSCATG00000016595	-	96	81.319	ENSOANG00000020912	POLR2J	100	71.795	Ornithorhynchus_anatinus
ENSCATG00000016595	-	97	77.451	ENSOCUG00000023609	POLR2J	100	68.504	Oryctolagus_cuniculus
ENSCATG00000016595	-	97	85.870	ENSORLG00000029046	polr2j	83	73.504	Oryzias_latipes
ENSCATG00000016595	-	97	85.870	ENSORLG00020007625	polr2j	83	73.504	Oryzias_latipes_hni
ENSCATG00000016595	-	97	85.870	ENSORLG00015003457	polr2j	83	73.504	Oryzias_latipes_hsok
ENSCATG00000016595	-	97	84.783	ENSOMEG00000002097	polr2j	100	72.650	Oryzias_melastigma
ENSCATG00000016595	-	100	67.969	ENSOGAG00000008250	-	100	67.969	Otolemur_garnettii
ENSCATG00000016595	-	97	85.870	ENSOARG00000014204	-	98	74.359	Ovis_aries
ENSCATG00000016595	-	96	84.615	ENSPPRG00000012439	-	100	74.359	Panthera_pardus
ENSCATG00000016595	-	97	85.870	ENSPTIG00000018714	-	87	84.615	Panthera_tigris_altaica
ENSCATG00000016595	-	97	85.870	ENSPSIG00000010173	-	89	85.870	Pelodiscus_sinensis
ENSCATG00000016595	-	97	85.870	ENSPMGG00000021256	polr2j	100	73.504	Periophthalmus_magnuspinnatus
ENSCATG00000016595	-	100	98.851	ENSPEMG00000015733	Polr2j	100	98.851	Peromyscus_maniculatus_bairdii
ENSCATG00000016595	-	96	84.615	ENSPCIG00000009026	-	100	74.359	Phascolarctos_cinereus
ENSCATG00000016595	-	97	85.870	ENSPFOG00000012001	polr2j	99	73.504	Poecilia_formosa
ENSCATG00000016595	-	97	85.870	ENSPLAG00000014075	polr2j	100	73.504	Poecilia_latipinna
ENSCATG00000016595	-	97	85.870	ENSPMEG00000020585	polr2j	100	73.504	Poecilia_mexicana
ENSCATG00000016595	-	97	85.870	ENSPREG00000015255	polr2j	100	73.504	Poecilia_reticulata
ENSCATG00000016595	-	100	100.000	ENSPCOG00000024573	-	100	100.000	Propithecus_coquereli
ENSCATG00000016595	-	96	78.022	ENSPVAG00000017770	-	66	68.103	Pteropus_vampyrus
ENSCATG00000016595	-	97	85.870	ENSPNYG00000014832	polr2j	100	73.504	Pundamilia_nyererei
ENSCATG00000016595	-	96	81.319	ENSPNAG00000016595	polr2j	100	70.940	Pygocentrus_nattereri
ENSCATG00000016595	-	96	84.615	ENSRNOG00000001430	Polr2j	100	74.359	Rattus_norvegicus
ENSCATG00000016595	-	100	100.000	ENSSBOG00000025579	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCATG00000016595	-	80	98.571	ENSSHAG00000010443	-	82	98.571	Sarcophilus_harrisii
ENSCATG00000016595	-	87	80.723	ENSSFOG00015003371	polr2j	83	69.725	Scleropages_formosus
ENSCATG00000016595	-	97	85.870	ENSSMAG00000006729	polr2j	100	73.504	Scophthalmus_maximus
ENSCATG00000016595	-	97	85.870	ENSSDUG00000018490	polr2j	100	73.504	Seriola_dumerili
ENSCATG00000016595	-	97	85.870	ENSSLDG00000022354	polr2j	100	73.504	Seriola_lalandi_dorsalis
ENSCATG00000016595	-	97	85.870	ENSSPUG00000010802	-	100	74.359	Sphenodon_punctatus
ENSCATG00000016595	-	97	85.870	ENSSPAG00000021953	polr2j	100	73.504	Stegastes_partitus
ENSCATG00000016595	-	96	71.429	ENSSSCG00000003703	-	83	61.207	Sus_scrofa
ENSCATG00000016595	-	96	84.615	ENSSSCG00000007688	-	100	74.359	Sus_scrofa
ENSCATG00000016595	-	97	85.870	ENSTGUG00000004501	-	89	85.870	Taeniopygia_guttata
ENSCATG00000016595	-	79	100.000	ENSTGUG00000004510	-	100	100.000	Taeniopygia_guttata
ENSCATG00000016595	-	96	84.615	ENSTRUG00000020842	polr2j	100	73.504	Takifugu_rubripes
ENSCATG00000016595	-	96	83.516	ENSTNIG00000002994	polr2j	100	72.650	Tetraodon_nigroviridis
ENSCATG00000016595	-	62	100.000	ENSTBEG00000005797	-	70	71.963	Tupaia_belangeri
ENSCATG00000016595	-	96	84.615	ENSUAMG00000011310	-	100	74.359	Ursus_americanus
ENSCATG00000016595	-	96	84.615	ENSUMAG00000012594	-	100	74.359	Ursus_maritimus
ENSCATG00000016595	-	97	84.783	ENSXETG00000001108	polr2j	100	74.359	Xenopus_tropicalis
ENSCATG00000016595	-	97	85.870	ENSXMAG00000012422	polr2j	100	73.504	Xiphophorus_maculatus