EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000017832 (Gene tree)
Gene ID: 105598790
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 22213 bases
Position: chrKQ011058.1:1157209-1179421
Accession: 105598790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000005546	RRM_1	PF00076.22	2.9e-35	1	2
ENSCATP00000005546	RRM_1	PF00076.22	2.9e-35	2	2
ENSCATP00000005543	RRM_1	PF00076.22	3.3e-35	1	2
ENSCATP00000005543	RRM_1	PF00076.22	3.3e-35	2	2
ENSCATP00000005555	RRM_1	PF00076.22	3.4e-35	1	2
ENSCATP00000005555	RRM_1	PF00076.22	3.4e-35	2	2
ENSCATP00000005539	RRM_1	PF00076.22	3.6e-35	1	2
ENSCATP00000005539	RRM_1	PF00076.22	3.6e-35	2	2
ENSCATP00000005477	RRM_1	PF00076.22	2.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000020761	RBM23-204	1221	-	ENSCATP00000005546	406 (aa)	-	A0A2K5KXX0
ENSCATT00000020748	RBM23-202	1323	XM_012088529	ENSCATP00000005539	440 (aa)	XP_011943919	A0A2K5KXW0
ENSCATT00000020758	RBM23-203	1275	XM_012088531	ENSCATP00000005543	424 (aa)	XP_011943921	A0A2K5KXY8
ENSCATT00000020781	RBM23-205	828	-	ENSCATP00000005555	275 (aa)	-	A0A2K5KXZ2
ENSCATT00000020590	RBM23-201	1548	-	ENSCATP00000005477	195 (aa)	-	A0A2K5KXQ0

Gene Model

Click here to download ENSCATG00000017832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000017832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000017832	RBM23	57	44.444	ENSCATG00000042826	-	80	44.444
ENSCATG00000017832	RBM23	52	40.816	ENSCATG00000041877	-	50	40.816
ENSCATG00000017832	RBM23	64	45.000	ENSCATG00000034065	PABPC1L	59	45.000
ENSCATG00000017832	RBM23	52	41.667	ENSCATG00000041727	-	53	41.667
ENSCATG00000017832	RBM23	63	40.506	ENSCATG00000042164	PABPC4	59	40.000
ENSCATG00000017832	RBM23	52	40.385	ENSCATG00000043560	-	57	35.443
ENSCATG00000017832	RBM23	62	35.135	ENSCATG00000012522	ELAVL2	88	35.135
ENSCATG00000017832	RBM23	55	30.667	ENSCATG00000030349	-	68	30.120
ENSCATG00000017832	RBM23	57	44.444	ENSCATG00000043125	-	80	44.444
ENSCATG00000017832	RBM23	62	35.135	ENSCATG00000029867	ELAVL4	99	35.135
ENSCATG00000017832	RBM23	99	52.878	ENSCATG00000030221	-	91	48.324
ENSCATG00000017832	RBM23	56	33.824	ENSCATG00000039829	HNRNPD	54	33.824
ENSCATG00000017832	RBM23	76	30.370	ENSCATG00000043838	TIAL1	69	30.370
ENSCATG00000017832	RBM23	95	30.769	ENSCATG00000032090	ELAVL1	95	34.146
ENSCATG00000017832	RBM23	94	63.214	ENSCATG00000032917	-	73	64.234
ENSCATG00000017832	RBM23	55	30.864	ENSCATG00000032328	HNRNPAB	56	30.864
ENSCATG00000017832	RBM23	61	41.667	ENSCATG00000039184	PABPC1	56	41.667
ENSCATG00000017832	RBM23	61	30.435	ENSCATG00000044984	-	53	30.247
ENSCATG00000017832	RBM23	62	36.486	ENSCATG00000044086	ELAVL3	88	36.486
ENSCATG00000017832	RBM23	55	37.097	ENSCATG00000040879	MSI2	59	36.667
ENSCATG00000017832	RBM23	64	38.889	ENSCATG00000029313	PABPC3	56	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000017832	RBM23	100	95.519	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSCATG00000017832	RBM23	100	91.778	ENSAMEG00000007322	RBM23	100	90.444	Ailuropoda_melanoleuca
ENSCATG00000017832	RBM23	100	81.119	ENSACAG00000001569	RBM23	96	70.675	Anolis_carolinensis
ENSCATG00000017832	RBM23	87	90.000	ENSANAG00000031466	-	93	89.820	Aotus_nancymaae
ENSCATG00000017832	RBM23	100	74.182	ENSANAG00000033790	-	100	70.047	Aotus_nancymaae
ENSCATG00000017832	RBM23	100	92.500	ENSBTAG00000038333	RBM23	100	87.689	Bos_taurus
ENSCATG00000017832	RBM23	100	94.182	ENSCJAG00000008482	RBM23	100	91.646	Callithrix_jacchus
ENSCATG00000017832	RBM23	100	88.000	ENSCAFG00000011217	RBM23	100	88.000	Canis_familiaris
ENSCATG00000017832	RBM23	100	92.143	ENSCAFG00020007711	RBM23	100	91.685	Canis_lupus_dingo
ENSCATG00000017832	RBM23	100	93.214	ENSCHIG00000025709	RBM23	100	87.689	Capra_hircus
ENSCATG00000017832	RBM23	100	95.273	ENSTSYG00000014755	RBM23	100	97.398	Carlito_syrichta
ENSCATG00000017832	RBM23	100	95.636	ENSCCAG00000025114	-	100	93.409	Cebus_capucinus
ENSCATG00000017832	RBM23	100	79.636	ENSCCAG00000028584	-	100	82.528	Cebus_capucinus
ENSCATG00000017832	RBM23	100	98.416	ENSCSAG00000016213	RBM23	100	98.416	Chlorocebus_sabaeus
ENSCATG00000017832	RBM23	51	97.143	ENSCHOG00000004460	-	51	97.468	Choloepus_hoffmanni
ENSCATG00000017832	RBM23	100	77.857	ENSCPBG00000026096	RBM23	96	71.132	Chrysemys_picta_bellii
ENSCATG00000017832	RBM23	100	97.091	ENSCANG00000001893	RBM23	100	97.767	Colobus_angolensis_palliatus
ENSCATG00000017832	RBM23	100	89.438	ENSDNOG00000032457	RBM23	100	87.865	Dasypus_novemcinctus
ENSCATG00000017832	RBM23	100	94.909	ENSDORG00000004926	-	100	97.026	Dipodomys_ordii
ENSCATG00000017832	RBM23	53	80.000	ENSETEG00000017915	-	93	80.000	Echinops_telfairi
ENSCATG00000017832	RBM23	100	91.071	ENSEASG00005011696	RBM23	95	90.233	Equus_asinus_asinus
ENSCATG00000017832	RBM23	100	91.786	ENSECAG00000009910	RBM23	100	88.710	Equus_caballus
ENSCATG00000017832	RBM23	100	87.189	ENSEEUG00000015560	RBM23	100	84.753	Erinaceus_europaeus
ENSCATG00000017832	RBM23	100	92.500	ENSFCAG00000006632	RBM23	100	91.484	Felis_catus
ENSCATG00000017832	RBM23	67	71.970	ENSGAGG00000003171	-	85	75.000	Gopherus_agassizii
ENSCATG00000017832	RBM23	100	95.682	ENSGGOG00000015707	RBM23	100	95.682	Gorilla_gorilla
ENSCATG00000017832	RBM23	100	82.857	ENSHGLG00100006114	RBM23	99	81.573	Heterocephalus_glaber_male
ENSCATG00000017832	RBM23	100	94.545	ENSSTOG00000010354	RBM23	100	96.654	Ictidomys_tridecemlineatus
ENSCATG00000017832	RBM23	100	85.816	ENSLAFG00000018567	RBM23	100	85.151	Loxodonta_africana
ENSCATG00000017832	RBM23	100	99.095	ENSMFAG00000037595	RBM23	100	99.095	Macaca_fascicularis
ENSCATG00000017832	RBM23	100	98.643	ENSMMUG00000018381	RBM23	100	98.643	Macaca_mulatta
ENSCATG00000017832	RBM23	100	99.091	ENSMNEG00000042442	RBM23	100	99.091	Macaca_nemestrina
ENSCATG00000017832	RBM23	100	95.093	ENSMLEG00000039954	RBM23	100	95.093	Mandrillus_leucophaeus
ENSCATG00000017832	RBM23	100	93.091	ENSMICG00000006364	RBM23	100	95.539	Microcebus_murinus
ENSCATG00000017832	RBM23	100	90.000	ENSMODG00000024448	RBM23	100	87.445	Monodelphis_domestica
ENSCATG00000017832	RBM23	100	94.286	ENSMPUG00000007151	RBM23	100	89.910	Mustela_putorius_furo
ENSCATG00000017832	RBM23	100	86.909	ENSMLUG00000012923	RBM23	100	83.784	Myotis_lucifugus
ENSCATG00000017832	RBM23	100	97.091	ENSNLEG00000014792	RBM23	100	95.937	Nomascus_leucogenys
ENSCATG00000017832	RBM23	75	97.080	ENSMEUG00000014548	-	60	97.080	Notamacropus_eugenii
ENSCATG00000017832	RBM23	100	86.071	ENSOPRG00000001092	RBM23	100	86.292	Ochotona_princeps
ENSCATG00000017832	RBM23	71	53.674	ENSOANG00000008908	-	100	52.077	Ornithorhynchus_anatinus
ENSCATG00000017832	RBM23	100	91.071	ENSOCUG00000002006	RBM23	100	88.143	Oryctolagus_cuniculus
ENSCATG00000017832	RBM23	99	87.889	ENSOGAG00000014794	RBM23	100	82.483	Otolemur_garnettii
ENSCATG00000017832	RBM23	100	92.143	ENSOARG00000019398	RBM23	100	86.825	Ovis_aries
ENSCATG00000017832	RBM23	100	96.000	ENSPPAG00000037922	RBM23	100	93.679	Pan_paniscus
ENSCATG00000017832	RBM23	100	92.500	ENSPPRG00000023344	RBM23	100	91.241	Panthera_pardus
ENSCATG00000017832	RBM23	100	92.500	ENSPTIG00000007831	RBM23	100	88.811	Panthera_tigris_altaica
ENSCATG00000017832	RBM23	100	93.905	ENSPTRG00000006151	RBM23	100	93.454	Pan_troglodytes
ENSCATG00000017832	RBM23	100	98.182	ENSPANG00000001324	RBM23	100	98.182	Papio_anubis
ENSCATG00000017832	RBM23	100	90.000	ENSPCIG00000027773	RBM23	100	87.118	Phascolarctos_cinereus
ENSCATG00000017832	RBM23	100	96.698	ENSPPYG00000005649	RBM23	100	96.698	Pongo_abelii
ENSCATG00000017832	RBM23	100	79.500	ENSPCAG00000006669	RBM23	100	67.038	Procavia_capensis
ENSCATG00000017832	RBM23	100	94.909	ENSPCOG00000018564	RBM23	100	97.398	Propithecus_coquereli
ENSCATG00000017832	RBM23	100	91.429	ENSPVAG00000013785	RBM23	100	88.341	Pteropus_vampyrus
ENSCATG00000017832	RBM23	100	97.455	ENSRBIG00000039276	RBM23	100	96.833	Rhinopithecus_bieti
ENSCATG00000017832	RBM23	100	97.455	ENSRROG00000044026	RBM23	100	96.833	Rhinopithecus_roxellana
ENSCATG00000017832	RBM23	100	97.887	ENSSBOG00000023037	-	100	91.374	Saimiri_boliviensis_boliviensis
ENSCATG00000017832	RBM23	96	74.905	ENSSBOG00000034977	-	99	64.516	Saimiri_boliviensis_boliviensis
ENSCATG00000017832	RBM23	100	90.000	ENSSHAG00000012932	RBM23	100	85.808	Sarcophilus_harrisii
ENSCATG00000017832	RBM23	100	90.357	ENSSARG00000005165	RBM23	100	88.814	Sorex_araneus
ENSCATG00000017832	RBM23	100	79.298	ENSSPUG00000000489	RBM23	96	72.477	Sphenodon_punctatus
ENSCATG00000017832	RBM23	100	91.786	ENSSSCG00000026700	RBM23	100	89.755	Sus_scrofa
ENSCATG00000017832	RBM23	100	87.500	ENSTBEG00000011543	RBM23	100	85.430	Tupaia_belangeri
ENSCATG00000017832	RBM23	100	91.071	ENSTTRG00000001500	RBM23	100	87.025	Tursiops_truncatus
ENSCATG00000017832	RBM23	100	93.571	ENSUAMG00000008524	RBM23	100	90.135	Ursus_americanus
ENSCATG00000017832	RBM23	100	93.571	ENSUMAG00000014075	RBM23	100	90.135	Ursus_maritimus
ENSCATG00000017832	RBM23	51	97.143	ENSVPAG00000000599	-	57	97.714	Vicugna_pacos
ENSCATG00000017832	RBM23	100	92.500	ENSVVUG00000019815	RBM23	100	91.910	Vulpes_vulpes
ENSCATG00000017832	RBM23	100	74.468	ENSXETG00000022623	rbm23	100	64.027	Xenopus_tropicalis