EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000017991 (Gene tree)
Gene ID: 105594850
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 141506 bases
Position: chrKQ010561.1:16112317-16253822
Accession: 105594850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000006196	PUF	PF00806.19	3.7e-71	1	8
ENSCATP00000006196	PUF	PF00806.19	3.7e-71	2	8
ENSCATP00000006196	PUF	PF00806.19	3.7e-71	3	8
ENSCATP00000006196	PUF	PF00806.19	3.7e-71	4	8
ENSCATP00000006196	PUF	PF00806.19	3.7e-71	5	8
ENSCATP00000006196	PUF	PF00806.19	3.7e-71	6	8
ENSCATP00000006196	PUF	PF00806.19	3.7e-71	7	8
ENSCATP00000006196	PUF	PF00806.19	3.7e-71	8	8
ENSCATP00000006081	PUF	PF00806.19	2.9e-70	1	8
ENSCATP00000006081	PUF	PF00806.19	2.9e-70	2	8
ENSCATP00000006081	PUF	PF00806.19	2.9e-70	3	8
ENSCATP00000006081	PUF	PF00806.19	2.9e-70	4	8
ENSCATP00000006081	PUF	PF00806.19	2.9e-70	5	8
ENSCATP00000006081	PUF	PF00806.19	2.9e-70	6	8
ENSCATP00000006081	PUF	PF00806.19	2.9e-70	7	8
ENSCATP00000006081	PUF	PF00806.19	2.9e-70	8	8
ENSCATP00000006116	PUF	PF00806.19	3.2e-70	1	8
ENSCATP00000006116	PUF	PF00806.19	3.2e-70	2	8
ENSCATP00000006116	PUF	PF00806.19	3.2e-70	3	8
ENSCATP00000006116	PUF	PF00806.19	3.2e-70	4	8
ENSCATP00000006116	PUF	PF00806.19	3.2e-70	5	8
ENSCATP00000006116	PUF	PF00806.19	3.2e-70	6	8
ENSCATP00000006116	PUF	PF00806.19	3.2e-70	7	8
ENSCATP00000006116	PUF	PF00806.19	3.2e-70	8	8
ENSCATP00000006070	PUF	PF00806.19	5.5e-70	1	8
ENSCATP00000006070	PUF	PF00806.19	5.5e-70	2	8
ENSCATP00000006070	PUF	PF00806.19	5.5e-70	3	8
ENSCATP00000006070	PUF	PF00806.19	5.5e-70	4	8
ENSCATP00000006070	PUF	PF00806.19	5.5e-70	5	8
ENSCATP00000006070	PUF	PF00806.19	5.5e-70	6	8
ENSCATP00000006070	PUF	PF00806.19	5.5e-70	7	8
ENSCATP00000006070	PUF	PF00806.19	5.5e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000022529	PUM1-207	297	-	ENSCATP00000006217	98 (aa)	-	A0A2K5KZV3
ENSCATT00000022094	PUM1-202	7382	XM_012079776	ENSCATP00000006081	1082 (aa)	XP_011935166	A0A2K5KZF4
ENSCATT00000022060	PUM1-201	7619	XM_012079768	ENSCATP00000006070	1161 (aa)	XP_011935158	A0A2K5KZE3
ENSCATT00000022188	PUM1-203	5161	XM_012079778	ENSCATP00000006116	1092 (aa)	XP_011935168	A0A2K5KZJ0
ENSCATT00000022517	PUM1-206	375	-	ENSCATP00000006212	124 (aa)	-	A0A2K5KZU8
ENSCATT00000022503	PUM1-205	1584	-	ENSCATP00000006207	527 (aa)	-	A0A2K5KZU3
ENSCATT00000022477	PUM1-204	2835	-	ENSCATP00000006196	944 (aa)	-	A0A2K5KZS2

Gene Model

Click here to download ENSCATG00000017991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000017991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000017991	PUM1	83	87.354	ENSCATG00000043826	PUM2	100	88.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000017991	PUM1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSCATG00000017991	PUM1	93	92.048	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSCATG00000017991	PUM1	100	100.000	ENSAMEG00000017656	PUM1	97	97.059	Ailuropoda_melanoleuca
ENSCATG00000017991	PUM1	93	91.566	ENSACIG00000021013	pum1	93	91.084	Amphilophus_citrinellus
ENSCATG00000017991	PUM1	93	92.048	ENSAOCG00000003944	pum1	94	91.566	Amphiprion_ocellaris
ENSCATG00000017991	PUM1	93	92.048	ENSAPEG00000014550	pum1	94	91.566	Amphiprion_percula
ENSCATG00000017991	PUM1	93	92.048	ENSATEG00000016004	pum1	94	91.566	Anabas_testudineus
ENSCATG00000017991	PUM1	100	98.792	ENSAPLG00000009351	PUM1	100	95.458	Anas_platyrhynchos
ENSCATG00000017991	PUM1	100	98.792	ENSACAG00000000682	PUM1	98	92.917	Anolis_carolinensis
ENSCATG00000017991	PUM1	100	100.000	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSCATG00000017991	PUM1	82	91.566	ENSACLG00000019354	pum1	93	91.084	Astatotilapia_calliptera
ENSCATG00000017991	PUM1	93	93.237	ENSAMXG00000020607	pum1	92	93.237	Astyanax_mexicanus
ENSCATG00000017991	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSCATG00000017991	PUM1	100	100.000	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSCATG00000017991	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	99.398	Canis_familiaris
ENSCATG00000017991	PUM1	90	99.758	ENSCAFG00020024616	PUM1	98	99.275	Canis_lupus_dingo
ENSCATG00000017991	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.359	Capra_hircus
ENSCATG00000017991	PUM1	100	100.000	ENSTSYG00000008868	PUM1	100	99.682	Carlito_syrichta
ENSCATG00000017991	PUM1	100	99.517	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSCATG00000017991	PUM1	100	99.517	ENSCLAG00000007662	PUM1	100	99.359	Chinchilla_lanigera
ENSCATG00000017991	PUM1	100	100.000	ENSCSAG00000001028	PUM1	100	96.750	Chlorocebus_sabaeus
ENSCATG00000017991	PUM1	92	100.000	ENSCHOG00000010245	PUM1	93	92.662	Choloepus_hoffmanni
ENSCATG00000017991	PUM1	100	98.551	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSCATG00000017991	PUM1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000017991	PUM1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSCATG00000017991	PUM1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSCATG00000017991	PUM1	81	91.566	ENSCSEG00000015981	pum1	93	91.084	Cynoglossus_semilaevis
ENSCATG00000017991	PUM1	93	91.325	ENSCVAG00000007043	pum1	94	90.843	Cyprinodon_variegatus
ENSCATG00000017991	PUM1	100	84.864	ENSDARG00000099256	pum1	95	94.408	Danio_rerio
ENSCATG00000017991	PUM1	100	100.000	ENSDNOG00000010939	PUM1	100	96.972	Dasypus_novemcinctus
ENSCATG00000017991	PUM1	89	96.150	ENSDORG00000001875	Pum1	100	99.034	Dipodomys_ordii
ENSCATG00000017991	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	91.309	Echinops_telfairi
ENSCATG00000017991	PUM1	100	100.000	ENSEASG00005010813	PUM1	100	96.970	Equus_asinus_asinus
ENSCATG00000017991	PUM1	100	99.306	ENSECAG00000021369	PUM1	100	96.804	Equus_caballus
ENSCATG00000017991	PUM1	80	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSCATG00000017991	PUM1	100	83.354	ENSELUG00000002409	pum1	95	93.720	Esox_lucius
ENSCATG00000017991	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSCATG00000017991	PUM1	100	96.539	ENSFALG00000001214	PUM1	93	98.792	Ficedula_albicollis
ENSCATG00000017991	PUM1	100	99.513	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSCATG00000017991	PUM1	93	91.566	ENSGMOG00000010491	pum1	94	91.084	Gadus_morhua
ENSCATG00000017991	PUM1	100	98.792	ENSGALG00000042598	PUM1	100	98.785	Gallus_gallus
ENSCATG00000017991	PUM1	93	91.325	ENSGAFG00000015617	pum1	94	90.843	Gambusia_affinis
ENSCATG00000017991	PUM1	93	91.807	ENSGACG00000005717	pum1	94	91.325	Gasterosteus_aculeatus
ENSCATG00000017991	PUM1	100	98.551	ENSGAGG00000001290	PUM1	100	98.583	Gopherus_agassizii
ENSCATG00000017991	PUM1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSCATG00000017991	PUM1	93	91.566	ENSHBUG00000018718	pum1	94	91.084	Haplochromis_burtoni
ENSCATG00000017991	PUM1	100	99.270	ENSHGLG00000013819	Pum1	100	99.084	Heterocephalus_glaber_female
ENSCATG00000017991	PUM1	100	99.270	ENSHGLG00100008621	Pum1	100	99.084	Heterocephalus_glaber_male
ENSCATG00000017991	PUM1	77	93.923	ENSHCOG00000005149	pum1	90	93.923	Hippocampus_comes
ENSCATG00000017991	PUM1	100	92.512	ENSIPUG00000020421	pum1	93	92.512	Ictalurus_punctatus
ENSCATG00000017991	PUM1	100	100.000	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSCATG00000017991	PUM1	100	100.000	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSCATG00000017991	PUM1	93	91.325	ENSKMAG00000003481	pum1	94	90.843	Kryptolebias_marmoratus
ENSCATG00000017991	PUM1	93	92.048	ENSLBEG00000002527	pum1	94	91.566	Labrus_bergylta
ENSCATG00000017991	PUM1	100	88.724	ENSLACG00000017188	PUM1	99	84.846	Latimeria_chalumnae
ENSCATG00000017991	PUM1	100	96.860	ENSLOCG00000005210	pum1	95	96.860	Lepisosteus_oculatus
ENSCATG00000017991	PUM1	100	99.034	ENSLAFG00000003178	PUM1	100	96.720	Loxodonta_africana
ENSCATG00000017991	PUM1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSCATG00000017991	PUM1	100	100.000	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSCATG00000017991	PUM1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSCATG00000017991	PUM1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSCATG00000017991	PUM1	93	91.807	ENSMAMG00000011606	pum1	94	91.325	Mastacembelus_armatus
ENSCATG00000017991	PUM1	93	91.566	ENSMZEG00005005834	pum1	94	91.084	Maylandia_zebra
ENSCATG00000017991	PUM1	100	98.792	ENSMGAG00000000724	PUM1	100	97.621	Meleagris_gallopavo
ENSCATG00000017991	PUM1	100	99.517	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSCATG00000017991	PUM1	100	99.758	ENSMICG00000007713	-	100	99.634	Microcebus_murinus
ENSCATG00000017991	PUM1	99	97.887	ENSMICG00000012213	-	100	95.894	Microcebus_murinus
ENSCATG00000017991	PUM1	100	99.275	ENSMOCG00000015463	Pum1	100	98.901	Microtus_ochrogaster
ENSCATG00000017991	PUM1	84	89.888	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSCATG00000017991	PUM1	100	98.068	ENSMODG00000017067	PUM1	100	95.630	Monodelphis_domestica
ENSCATG00000017991	PUM1	87	88.506	ENSMALG00000016399	pum1	88	91.084	Monopterus_albus
ENSCATG00000017991	PUM1	100	99.275	MGP_CAROLIEiJ_G0026549	Pum1	100	98.626	Mus_caroli
ENSCATG00000017991	PUM1	100	99.517	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSCATG00000017991	PUM1	100	99.517	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSCATG00000017991	PUM1	100	99.517	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSCATG00000017991	PUM1	100	100.000	ENSMPUG00000015454	PUM1	100	97.054	Mustela_putorius_furo
ENSCATG00000017991	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	96.888	Myotis_lucifugus
ENSCATG00000017991	PUM1	100	99.517	ENSNGAG00000002378	Pum1	100	99.364	Nannospalax_galili
ENSCATG00000017991	PUM1	100	78.452	ENSNBRG00000010689	pum1	100	83.457	Neolamprologus_brichardi
ENSCATG00000017991	PUM1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSCATG00000017991	PUM1	80	100.000	ENSMEUG00000000976	-	73	97.297	Notamacropus_eugenii
ENSCATG00000017991	PUM1	86	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSCATG00000017991	PUM1	100	99.517	ENSODEG00000003465	PUM1	100	99.176	Octodon_degus
ENSCATG00000017991	PUM1	93	91.807	ENSONIG00000002290	pum1	94	91.325	Oreochromis_niloticus
ENSCATG00000017991	PUM1	83	76.196	ENSOANG00000004902	-	100	75.000	Ornithorhynchus_anatinus
ENSCATG00000017991	PUM1	100	100.000	ENSOCUG00000008641	PUM1	99	96.552	Oryctolagus_cuniculus
ENSCATG00000017991	PUM1	93	93.494	ENSORLG00000011482	pum1	94	91.084	Oryzias_latipes
ENSCATG00000017991	PUM1	93	93.494	ENSORLG00020019461	pum1	94	91.084	Oryzias_latipes_hni
ENSCATG00000017991	PUM1	93	93.494	ENSORLG00015011375	pum1	94	91.084	Oryzias_latipes_hsok
ENSCATG00000017991	PUM1	87	92.771	ENSOMEG00000009312	pum1	100	75.400	Oryzias_melastigma
ENSCATG00000017991	PUM1	100	99.306	ENSOGAG00000011063	PUM1	100	94.710	Otolemur_garnettii
ENSCATG00000017991	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	99.275	Ovis_aries
ENSCATG00000017991	PUM1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSCATG00000017991	PUM1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSCATG00000017991	PUM1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSCATG00000017991	PUM1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSCATG00000017991	PUM1	100	100.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSCATG00000017991	PUM1	94	93.932	ENSPKIG00000010578	pum1	84	93.961	Paramormyrops_kingsleyae
ENSCATG00000017991	PUM1	100	98.551	ENSPSIG00000014118	PUM1	98	97.804	Pelodiscus_sinensis
ENSCATG00000017991	PUM1	100	76.819	ENSPMGG00000005836	pum1	100	81.907	Periophthalmus_magnuspinnatus
ENSCATG00000017991	PUM1	100	99.517	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSCATG00000017991	PUM1	100	98.068	ENSPCIG00000014151	PUM1	100	98.134	Phascolarctos_cinereus
ENSCATG00000017991	PUM1	94	91.325	ENSPFOG00000007289	pum1	93	90.843	Poecilia_formosa
ENSCATG00000017991	PUM1	100	91.325	ENSPLAG00000007256	pum1	94	90.843	Poecilia_latipinna
ENSCATG00000017991	PUM1	89	91.325	ENSPMEG00000019543	pum1	92	90.843	Poecilia_mexicana
ENSCATG00000017991	PUM1	93	91.325	ENSPREG00000005195	pum1	94	90.843	Poecilia_reticulata
ENSCATG00000017991	PUM1	100	100.000	ENSPPYG00000001621	PUM1	100	95.792	Pongo_abelii
ENSCATG00000017991	PUM1	84	99.383	ENSPCAG00000001979	PUM1	74	99.383	Procavia_capensis
ENSCATG00000017991	PUM1	100	99.758	ENSPCOG00000004398	PUM1	100	99.634	Propithecus_coquereli
ENSCATG00000017991	PUM1	100	100.000	ENSPVAG00000005207	PUM1	97	95.202	Pteropus_vampyrus
ENSCATG00000017991	PUM1	93	91.566	ENSPNYG00000009518	pum1	94	91.084	Pundamilia_nyererei
ENSCATG00000017991	PUM1	93	93.478	ENSPNAG00000026728	pum1	95	93.478	Pygocentrus_nattereri
ENSCATG00000017991	PUM1	100	99.306	ENSRNOG00000011709	Pum1	100	96.549	Rattus_norvegicus
ENSCATG00000017991	PUM1	100	100.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSCATG00000017991	PUM1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSCATG00000017991	PUM1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSCATG00000017991	PUM1	100	98.068	ENSSHAG00000010918	PUM1	100	95.546	Sarcophilus_harrisii
ENSCATG00000017991	PUM1	93	92.048	ENSSMAG00000010918	pum1	94	91.566	Scophthalmus_maximus
ENSCATG00000017991	PUM1	93	92.048	ENSSDUG00000009021	pum1	94	91.566	Seriola_dumerili
ENSCATG00000017991	PUM1	100	81.188	ENSSLDG00000009667	pum1	93	91.566	Seriola_lalandi_dorsalis
ENSCATG00000017991	PUM1	99	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSCATG00000017991	PUM1	100	98.792	ENSSPUG00000006267	PUM1	100	95.034	Sphenodon_punctatus
ENSCATG00000017991	PUM1	93	92.048	ENSSPAG00000016636	pum1	94	91.566	Stegastes_partitus
ENSCATG00000017991	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSCATG00000017991	PUM1	93	92.048	ENSTRUG00000013121	pum1	94	91.566	Takifugu_rubripes
ENSCATG00000017991	PUM1	93	91.827	ENSTNIG00000016983	pum1	93	91.346	Tetraodon_nigroviridis
ENSCATG00000017991	PUM1	84	100.000	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSCATG00000017991	PUM1	91	99.275	ENSTTRG00000007436	PUM1	90	96.989	Tursiops_truncatus
ENSCATG00000017991	PUM1	98	100.000	ENSUAMG00000018262	-	100	96.587	Ursus_americanus
ENSCATG00000017991	PUM1	100	97.024	ENSUMAG00000009211	PUM1	100	99.758	Ursus_maritimus
ENSCATG00000017991	PUM1	100	99.306	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSCATG00000017991	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	99.758	Vulpes_vulpes
ENSCATG00000017991	PUM1	100	89.372	ENSXETG00000012904	pum1	99	85.762	Xenopus_tropicalis
ENSCATG00000017991	PUM1	93	91.325	ENSXMAG00000002945	pum1	94	90.843	Xiphophorus_maculatus