EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000019069 (Gene tree)
Gene ID: 105599234
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 37913 bases
Position: chrKQ011124.1:24475080-24512992
Accession: 105599234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000006040	MRP-S27	PF10037.9	4.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000022014	PTCD2-202	840	-	ENSCATP00000006056	279 (aa)	-	A0A2K5KZC8
ENSCATT00000021977	PTCD2-201	3012	XM_012089353	ENSCATP00000006040	383 (aa)	XP_011944743	A0A2K5KZB8
ENSCATT00000022030	PTCD2-203	651	XM_012089351	ENSCATP00000006059	216 (aa)	XP_011944741	A0A2K5KZE2

Gene Model

Click here to download ENSCATG00000019069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000019069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000019069	PTCD2	100	91.123	ENSG00000049883	PTCD2	100	91.414	Homo_sapiens
ENSCATG00000019069	PTCD2	98	47.059	ENSAPOG00000020682	ptcd2	97	47.059	Acanthochromis_polyacanthus
ENSCATG00000019069	PTCD2	100	76.501	ENSAMEG00000007194	PTCD2	99	76.501	Ailuropoda_melanoleuca
ENSCATG00000019069	PTCD2	90	42.120	ENSACIG00000002053	ptcd2	100	42.120	Amphilophus_citrinellus
ENSCATG00000019069	PTCD2	98	46.524	ENSAOCG00000006616	ptcd2	96	46.524	Amphiprion_ocellaris
ENSCATG00000019069	PTCD2	98	46.524	ENSAPEG00000022926	ptcd2	96	46.524	Amphiprion_percula
ENSCATG00000019069	PTCD2	99	56.955	ENSACAG00000009747	PTCD2	97	56.955	Anolis_carolinensis
ENSCATG00000019069	PTCD2	100	86.423	ENSANAG00000029353	PTCD2	99	86.423	Aotus_nancymaae
ENSCATG00000019069	PTCD2	98	44.652	ENSACLG00000027742	ptcd2	96	44.652	Astatotilapia_calliptera
ENSCATG00000019069	PTCD2	84	44.892	ENSAMXG00000029404	ptcd2	86	44.892	Astyanax_mexicanus
ENSCATG00000019069	PTCD2	100	80.208	ENSBTAG00000014675	PTCD2	100	80.208	Bos_taurus
ENSCATG00000019069	PTCD2	100	85.901	ENSCJAG00000016364	PTCD2	99	85.901	Callithrix_jacchus
ENSCATG00000019069	PTCD2	100	75.457	ENSCAFG00000007982	PTCD2	90	75.457	Canis_familiaris
ENSCATG00000019069	PTCD2	90	77.746	ENSCAFG00020019147	PTCD2	97	77.746	Canis_lupus_dingo
ENSCATG00000019069	PTCD2	100	80.208	ENSCHIG00000017118	PTCD2	100	80.208	Capra_hircus
ENSCATG00000019069	PTCD2	100	75.196	ENSCPOG00000040168	PTCD2	100	75.196	Cavia_porcellus
ENSCATG00000019069	PTCD2	100	85.640	ENSCCAG00000029389	-	99	85.640	Cebus_capucinus
ENSCATG00000019069	PTCD2	83	78.370	ENSCCAG00000021996	-	98	78.370	Cebus_capucinus
ENSCATG00000019069	PTCD2	100	74.413	ENSCLAG00000000072	PTCD2	100	74.413	Chinchilla_lanigera
ENSCATG00000019069	PTCD2	100	95.561	ENSCSAG00000015623	PTCD2	100	95.561	Chlorocebus_sabaeus
ENSCATG00000019069	PTCD2	90	59.195	ENSCHOG00000010634	PTCD2	100	59.195	Choloepus_hoffmanni
ENSCATG00000019069	PTCD2	100	54.805	ENSCPBG00000000216	PTCD2	98	54.805	Chrysemys_picta_bellii
ENSCATG00000019069	PTCD2	100	94.778	ENSCANG00000035636	PTCD2	99	94.778	Colobus_angolensis_palliatus
ENSCATG00000019069	PTCD2	100	73.629	ENSCGRG00001015289	Ptcd2	84	73.629	Cricetulus_griseus_chok1gshd
ENSCATG00000019069	PTCD2	100	73.629	ENSCGRG00000006193	Ptcd2	84	73.629	Cricetulus_griseus_crigri
ENSCATG00000019069	PTCD2	98	44.920	ENSCVAG00000001285	ptcd2	95	44.920	Cyprinodon_variegatus
ENSCATG00000019069	PTCD2	99	44.241	ENSDARG00000035391	ptcd2	99	44.241	Danio_rerio
ENSCATG00000019069	PTCD2	100	74.935	ENSDNOG00000008719	PTCD2	100	74.935	Dasypus_novemcinctus
ENSCATG00000019069	PTCD2	100	76.546	ENSDORG00000004921	Ptcd2	100	76.546	Dipodomys_ordii
ENSCATG00000019069	PTCD2	100	68.490	ENSETEG00000016542	PTCD2	99	68.490	Echinops_telfairi
ENSCATG00000019069	PTCD2	100	79.634	ENSEASG00005018038	PTCD2	100	79.634	Equus_asinus_asinus
ENSCATG00000019069	PTCD2	100	79.634	ENSECAG00000007022	PTCD2	98	79.634	Equus_caballus
ENSCATG00000019069	PTCD2	100	72.063	ENSEEUG00000014031	PTCD2	99	72.063	Erinaceus_europaeus
ENSCATG00000019069	PTCD2	91	51.282	ENSELUG00000003584	ptcd2	91	51.282	Esox_lucius
ENSCATG00000019069	PTCD2	100	71.540	ENSFCAG00000045432	PTCD2	82	71.540	Felis_catus
ENSCATG00000019069	PTCD2	85	52.599	ENSFALG00000010299	PTCD2	99	52.599	Ficedula_albicollis
ENSCATG00000019069	PTCD2	100	77.546	ENSFDAG00000018461	PTCD2	100	77.546	Fukomys_damarensis
ENSCATG00000019069	PTCD2	91	50.997	ENSGMOG00000003637	ptcd2	91	50.997	Gadus_morhua
ENSCATG00000019069	PTCD2	91	51.429	ENSGALG00000038260	PTCD2	100	49.219	Gallus_gallus
ENSCATG00000019069	PTCD2	99	57.963	ENSGAGG00000021952	PTCD2	98	57.963	Gopherus_agassizii
ENSCATG00000019069	PTCD2	100	90.862	ENSGGOG00000010695	PTCD2	99	90.862	Gorilla_gorilla
ENSCATG00000019069	PTCD2	98	44.385	ENSHBUG00000009191	ptcd2	96	44.385	Haplochromis_burtoni
ENSCATG00000019069	PTCD2	100	75.196	ENSHGLG00000001234	PTCD2	100	75.196	Heterocephalus_glaber_female
ENSCATG00000019069	PTCD2	100	75.196	ENSHGLG00100015419	PTCD2	100	75.196	Heterocephalus_glaber_male
ENSCATG00000019069	PTCD2	98	46.154	ENSHCOG00000001703	ptcd2	95	46.154	Hippocampus_comes
ENSCATG00000019069	PTCD2	85	45.062	ENSIPUG00000006080	ptcd2	90	45.087	Ictalurus_punctatus
ENSCATG00000019069	PTCD2	99	78.796	ENSSTOG00000006596	PTCD2	99	78.796	Ictidomys_tridecemlineatus
ENSCATG00000019069	PTCD2	100	77.285	ENSJJAG00000024388	Ptcd2	100	77.285	Jaculus_jaculus
ENSCATG00000019069	PTCD2	98	42.781	ENSKMAG00000009329	ptcd2	97	42.781	Kryptolebias_marmoratus
ENSCATG00000019069	PTCD2	98	45.455	ENSLBEG00000024871	ptcd2	95	45.455	Labrus_bergylta
ENSCATG00000019069	PTCD2	94	55.278	ENSLOCG00000011122	ptcd2	94	55.278	Lepisosteus_oculatus
ENSCATG00000019069	PTCD2	81	76.206	ENSLAFG00000004115	PTCD2	100	76.206	Loxodonta_africana
ENSCATG00000019069	PTCD2	100	98.433	ENSMFAG00000031516	PTCD2	99	98.433	Macaca_fascicularis
ENSCATG00000019069	PTCD2	100	98.172	ENSMNEG00000007537	PTCD2	100	98.172	Macaca_nemestrina
ENSCATG00000019069	PTCD2	100	99.739	ENSMLEG00000031093	PTCD2	99	99.739	Mandrillus_leucophaeus
ENSCATG00000019069	PTCD2	98	48.128	ENSMAMG00000018529	ptcd2	97	48.128	Mastacembelus_armatus
ENSCATG00000019069	PTCD2	98	44.652	ENSMZEG00005003625	ptcd2	96	44.652	Maylandia_zebra
ENSCATG00000019069	PTCD2	91	52.011	ENSMGAG00000005033	PTCD2	100	52.011	Meleagris_gallopavo
ENSCATG00000019069	PTCD2	100	58.225	ENSMAUG00000020253	Ptcd2	100	58.225	Mesocricetus_auratus
ENSCATG00000019069	PTCD2	100	80.679	ENSMICG00000004535	PTCD2	99	80.679	Microcebus_murinus
ENSCATG00000019069	PTCD2	100	73.890	ENSMOCG00000019985	Ptcd2	100	73.890	Microtus_ochrogaster
ENSCATG00000019069	PTCD2	100	57.292	ENSMODG00000001695	PTCD2	100	57.292	Monodelphis_domestica
ENSCATG00000019069	PTCD2	98	48.663	ENSMALG00000022372	ptcd2	97	48.663	Monopterus_albus
ENSCATG00000019069	PTCD2	100	73.368	MGP_CAROLIEiJ_G0018829	Ptcd2	100	73.368	Mus_caroli
ENSCATG00000019069	PTCD2	100	73.107	ENSMUSG00000021650	Ptcd2	100	73.107	Mus_musculus
ENSCATG00000019069	PTCD2	100	75.196	MGP_PahariEiJ_G0015904	Ptcd2	100	75.196	Mus_pahari
ENSCATG00000019069	PTCD2	100	73.107	MGP_SPRETEiJ_G0019711	Ptcd2	100	73.107	Mus_spretus
ENSCATG00000019069	PTCD2	100	77.807	ENSMPUG00000014401	PTCD2	100	77.807	Mustela_putorius_furo
ENSCATG00000019069	PTCD2	100	77.807	ENSMLUG00000007374	PTCD2	99	77.807	Myotis_lucifugus
ENSCATG00000019069	PTCD2	100	73.890	ENSNGAG00000005027	Ptcd2	100	73.890	Nannospalax_galili
ENSCATG00000019069	PTCD2	98	44.920	ENSNBRG00000008174	ptcd2	97	44.920	Neolamprologus_brichardi
ENSCATG00000019069	PTCD2	86	44.848	ENSNBRG00000000092	-	100	44.848	Neolamprologus_brichardi
ENSCATG00000019069	PTCD2	100	90.601	ENSNLEG00000004516	PTCD2	99	90.601	Nomascus_leucogenys
ENSCATG00000019069	PTCD2	100	45.736	ENSMEUG00000014012	-	99	45.736	Notamacropus_eugenii
ENSCATG00000019069	PTCD2	100	73.107	ENSOPRG00000007290	PTCD2	99	73.107	Ochotona_princeps
ENSCATG00000019069	PTCD2	100	76.240	ENSODEG00000016417	PTCD2	100	76.240	Octodon_degus
ENSCATG00000019069	PTCD2	82	46.032	ENSONIG00000011269	ptcd2	92	46.032	Oreochromis_niloticus
ENSCATG00000019069	PTCD2	95	80.000	ENSOCUG00000007970	PTCD2	100	78.590	Oryctolagus_cuniculus
ENSCATG00000019069	PTCD2	98	45.722	ENSORLG00000003851	ptcd2	95	45.722	Oryzias_latipes
ENSCATG00000019069	PTCD2	98	44.920	ENSORLG00020009823	ptcd2	97	44.920	Oryzias_latipes_hni
ENSCATG00000019069	PTCD2	90	46.821	ENSORLG00015016777	ptcd2	99	46.821	Oryzias_latipes_hsok
ENSCATG00000019069	PTCD2	98	44.385	ENSOMEG00000012396	ptcd2	90	44.385	Oryzias_melastigma
ENSCATG00000019069	PTCD2	100	74.413	ENSOGAG00000008390	PTCD2	99	74.413	Otolemur_garnettii
ENSCATG00000019069	PTCD2	100	79.948	ENSOARG00000005087	PTCD2	99	79.948	Ovis_aries
ENSCATG00000019069	PTCD2	100	90.601	ENSPPAG00000028480	PTCD2	99	90.601	Pan_paniscus
ENSCATG00000019069	PTCD2	100	90.862	ENSPTRG00000016968	PTCD2	99	90.862	Pan_troglodytes
ENSCATG00000019069	PTCD2	90	98.551	ENSPANG00000006611	PTCD2	89	98.551	Papio_anubis
ENSCATG00000019069	PTCD2	91	48.433	ENSPKIG00000019896	ptcd2	91	48.433	Paramormyrops_kingsleyae
ENSCATG00000019069	PTCD2	81	62.460	ENSPSIG00000014559	PTCD2	96	62.460	Pelodiscus_sinensis
ENSCATG00000019069	PTCD2	100	72.727	ENSPEMG00000000884	Ptcd2	100	72.727	Peromyscus_maniculatus_bairdii
ENSCATG00000019069	PTCD2	100	59.635	ENSPCIG00000029047	PTCD2	100	59.635	Phascolarctos_cinereus
ENSCATG00000019069	PTCD2	98	44.385	ENSPLAG00000010456	ptcd2	97	44.385	Poecilia_latipinna
ENSCATG00000019069	PTCD2	98	44.385	ENSPREG00000021797	ptcd2	95	44.385	Poecilia_reticulata
ENSCATG00000019069	PTCD2	100	77.285	ENSPPYG00000015543	PTCD2	99	77.285	Pongo_abelii
ENSCATG00000019069	PTCD2	81	64.401	ENSPCAG00000006806	PTCD2	98	64.401	Procavia_capensis
ENSCATG00000019069	PTCD2	100	75.457	ENSPVAG00000010935	PTCD2	99	75.457	Pteropus_vampyrus
ENSCATG00000019069	PTCD2	98	44.652	ENSPNYG00000003122	ptcd2	96	44.652	Pundamilia_nyererei
ENSCATG00000019069	PTCD2	91	49.714	ENSPNAG00000021490	ptcd2	91	49.714	Pygocentrus_nattereri
ENSCATG00000019069	PTCD2	100	72.846	ENSRNOG00000028403	Ptcd2	100	72.846	Rattus_norvegicus
ENSCATG00000019069	PTCD2	100	89.034	ENSRBIG00000032929	PTCD2	99	89.034	Rhinopithecus_bieti
ENSCATG00000019069	PTCD2	100	94.256	ENSRROG00000000080	PTCD2	100	94.256	Rhinopithecus_roxellana
ENSCATG00000019069	PTCD2	100	84.334	ENSSBOG00000018911	PTCD2	100	84.334	Saimiri_boliviensis_boliviensis
ENSCATG00000019069	PTCD2	100	58.594	ENSSHAG00000003833	PTCD2	99	58.594	Sarcophilus_harrisii
ENSCATG00000019069	PTCD2	92	46.348	ENSSFOG00015015415	ptcd2	92	46.348	Scleropages_formosus
ENSCATG00000019069	PTCD2	98	44.267	ENSSMAG00000010350	ptcd2	95	44.267	Scophthalmus_maximus
ENSCATG00000019069	PTCD2	98	47.594	ENSSDUG00000008142	ptcd2	93	47.594	Seriola_dumerili
ENSCATG00000019069	PTCD2	98	47.861	ENSSLDG00000015284	ptcd2	97	47.861	Seriola_lalandi_dorsalis
ENSCATG00000019069	PTCD2	81	68.608	ENSSARG00000004983	PTCD2	99	68.608	Sorex_araneus
ENSCATG00000019069	PTCD2	100	51.169	ENSSPUG00000000176	PTCD2	96	51.169	Sphenodon_punctatus
ENSCATG00000019069	PTCD2	98	45.187	ENSSPAG00000008591	ptcd2	96	45.187	Stegastes_partitus
ENSCATG00000019069	PTCD2	100	80.157	ENSSSCG00000016975	PTCD2	90	80.157	Sus_scrofa
ENSCATG00000019069	PTCD2	90	52.464	ENSTGUG00000005705	PTCD2	99	52.464	Taeniopygia_guttata
ENSCATG00000019069	PTCD2	100	75.979	ENSTBEG00000016559	PTCD2	99	75.979	Tupaia_belangeri
ENSCATG00000019069	PTCD2	100	79.688	ENSTTRG00000011851	PTCD2	99	79.688	Tursiops_truncatus
ENSCATG00000019069	PTCD2	100	76.501	ENSUAMG00000007583	PTCD2	90	76.501	Ursus_americanus
ENSCATG00000019069	PTCD2	100	76.762	ENSUMAG00000007666	PTCD2	100	76.762	Ursus_maritimus
ENSCATG00000019069	PTCD2	100	78.906	ENSVPAG00000009597	PTCD2	99	78.906	Vicugna_pacos
ENSCATG00000019069	PTCD2	100	75.718	ENSVVUG00000007299	-	100	75.718	Vulpes_vulpes
ENSCATG00000019069	PTCD2	93	52.925	ENSXETG00000031652	PTCD2	94	52.925	Xenopus_tropicalis
ENSCATG00000019069	PTCD2	97	43.817	ENSXMAG00000005940	ptcd2	88	43.817	Xiphophorus_maculatus