EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000019284 (Gene tree)
Gene ID: 105585994
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 189934 bases
Position: chrKQ009625.1:506309-696242
Accession: 105585994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000006373	Ago_hook	PF10427.9	5.5e-19	1	1
ENSCATP00000006327	Ago_hook	PF10427.9	6.3e-19	1	1
ENSCATP00000006291	Ago_hook	PF10427.9	1e-18	1	1
ENSCATP00000006341	Ago_hook	PF10427.9	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000023009	TNRC6A-205	5925	-	ENSCATP00000006373	1974 (aa)	-	A0A2K5L0C1
ENSCATT00000022788	TNRC6A-201	9603	XM_012060543	ENSCATP00000006291	1929 (aa)	XP_011915933	A0A2K5L032
ENSCATT00000022896	TNRC6A-203	9528	XM_012060583	ENSCATP00000006327	1904 (aa)	XP_011915973	A0A2K5L057
ENSCATT00000022860	TNRC6A-202	9426	XM_012060622	ENSCATP00000006317	1870 (aa)	XP_011916012	A0A2K5L049
ENSCATT00000022930	TNRC6A-204	9402	-	ENSCATP00000006341	1862 (aa)	-	A0A2K5L076

Gene Model

Click here to download ENSCATG00000019284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000019284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000019284	TNRC6A	98	36.693	ENSCATG00000029291	TNRC6B	99	36.995
ENSCATG00000019284	TNRC6A	98	49.852	ENSCATG00000033135	TNRC6C	98	43.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000019284	TNRC6A	99	98.896	ENSG00000090905	TNRC6A	99	98.896	Homo_sapiens
ENSCATG00000019284	TNRC6A	97	95.109	ENSAMEG00000009333	TNRC6A	99	95.109	Ailuropoda_melanoleuca
ENSCATG00000019284	TNRC6A	97	80.765	ENSAPLG00000009978	TNRC6A	100	80.765	Anas_platyrhynchos
ENSCATG00000019284	TNRC6A	99	53.013	ENSACAG00000011857	TNRC6A	99	55.044	Anolis_carolinensis
ENSCATG00000019284	TNRC6A	99	98.424	ENSANAG00000025252	TNRC6A	99	98.424	Aotus_nancymaae
ENSCATG00000019284	TNRC6A	91	57.095	ENSAMXG00000019919	tnrc6a	99	56.935	Astyanax_mexicanus
ENSCATG00000019284	TNRC6A	99	95.323	ENSBTAG00000017999	TNRC6A	99	95.323	Bos_taurus
ENSCATG00000019284	TNRC6A	99	97.817	ENSCJAG00000020677	TNRC6A	99	97.817	Callithrix_jacchus
ENSCATG00000019284	TNRC6A	99	96.302	ENSCAFG00000017531	TNRC6A	100	96.302	Canis_familiaris
ENSCATG00000019284	TNRC6A	99	93.909	ENSCAFG00020021160	TNRC6A	99	94.754	Canis_lupus_dingo
ENSCATG00000019284	TNRC6A	99	94.535	ENSCHIG00000019448	TNRC6A	99	94.167	Capra_hircus
ENSCATG00000019284	TNRC6A	99	96.427	ENSTSYG00000012711	TNRC6A	99	96.427	Carlito_syrichta
ENSCATG00000019284	TNRC6A	99	95.796	ENSCPOG00000036684	TNRC6A	99	95.796	Cavia_porcellus
ENSCATG00000019284	TNRC6A	99	98.739	ENSCCAG00000033664	TNRC6A	99	98.739	Cebus_capucinus
ENSCATG00000019284	TNRC6A	100	91.446	ENSCLAG00000010217	TNRC6A	100	91.446	Chinchilla_lanigera
ENSCATG00000019284	TNRC6A	98	97.678	ENSCSAG00000006561	TNRC6A	99	96.721	Chlorocebus_sabaeus
ENSCATG00000019284	TNRC6A	92	90.780	ENSCHOG00000009374	TNRC6A	92	90.780	Choloepus_hoffmanni
ENSCATG00000019284	TNRC6A	91	82.390	ENSCPBG00000001881	TNRC6A	99	82.390	Chrysemys_picta_bellii
ENSCATG00000019284	TNRC6A	99	99.212	ENSCANG00000041549	TNRC6A	99	99.212	Colobus_angolensis_palliatus
ENSCATG00000019284	TNRC6A	99	94.380	ENSCGRG00001015021	Tnrc6a	99	94.380	Cricetulus_griseus_chok1gshd
ENSCATG00000019284	TNRC6A	99	93.330	ENSCGRG00000013351	Tnrc6a	99	93.120	Cricetulus_griseus_crigri
ENSCATG00000019284	TNRC6A	91	57.039	ENSDARG00000079688	tnrc6a	99	57.071	Danio_rerio
ENSCATG00000019284	TNRC6A	97	92.427	ENSDNOG00000013989	TNRC6A	99	92.324	Dasypus_novemcinctus
ENSCATG00000019284	TNRC6A	98	84.331	ENSETEG00000014658	TNRC6A	99	84.279	Echinops_telfairi
ENSCATG00000019284	TNRC6A	99	96.113	ENSEASG00005017693	TNRC6A	99	96.113	Equus_asinus_asinus
ENSCATG00000019284	TNRC6A	99	96.093	ENSECAG00000025056	TNRC6A	100	96.093	Equus_caballus
ENSCATG00000019284	TNRC6A	97	88.508	ENSEEUG00000004530	TNRC6A	99	88.456	Erinaceus_europaeus
ENSCATG00000019284	TNRC6A	99	95.376	ENSFCAG00000025236	TNRC6A	99	95.376	Felis_catus
ENSCATG00000019284	TNRC6A	97	77.903	ENSFALG00000003757	TNRC6A	99	77.312	Ficedula_albicollis
ENSCATG00000019284	TNRC6A	91	82.536	ENSGALG00000006068	TNRC6A	99	82.939	Gallus_gallus
ENSCATG00000019284	TNRC6A	91	81.599	ENSGAGG00000023209	TNRC6A	99	81.886	Gopherus_agassizii
ENSCATG00000019284	TNRC6A	100	98.792	ENSGGOG00000005137	TNRC6A	100	98.792	Gorilla_gorilla
ENSCATG00000019284	TNRC6A	96	74.666	ENSHGLG00000007368	-	93	74.986	Heterocephalus_glaber_female
ENSCATG00000019284	TNRC6A	99	93.852	ENSHGLG00000012474	-	99	93.589	Heterocephalus_glaber_female
ENSCATG00000019284	TNRC6A	99	93.260	ENSHGLG00100012496	-	99	93.207	Heterocephalus_glaber_male
ENSCATG00000019284	TNRC6A	100	92.678	ENSSTOG00000023394	TNRC6A	100	92.678	Ictidomys_tridecemlineatus
ENSCATG00000019284	TNRC6A	97	68.756	ENSLACG00000006277	TNRC6A	100	69.424	Latimeria_chalumnae
ENSCATG00000019284	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	92	83.223	Lepisosteus_oculatus
ENSCATG00000019284	TNRC6A	99	93.251	ENSLAFG00000004209	TNRC6A	99	94.341	Loxodonta_africana
ENSCATG00000019284	TNRC6A	97	99.530	ENSMFAG00000003824	TNRC6A	99	99.530	Macaca_fascicularis
ENSCATG00000019284	TNRC6A	99	99.002	ENSMMUG00000020428	TNRC6A	99	99.002	Macaca_mulatta
ENSCATG00000019284	TNRC6A	99	99.527	ENSMNEG00000034854	TNRC6A	99	99.530	Macaca_nemestrina
ENSCATG00000019284	TNRC6A	100	98.738	ENSMLEG00000042737	TNRC6A	100	98.738	Mandrillus_leucophaeus
ENSCATG00000019284	TNRC6A	98	77.761	ENSMGAG00000006455	TNRC6A	99	77.806	Meleagris_gallopavo
ENSCATG00000019284	TNRC6A	99	94.013	ENSMAUG00000012750	Tnrc6a	99	94.013	Mesocricetus_auratus
ENSCATG00000019284	TNRC6A	99	97.740	ENSMICG00000030685	TNRC6A	99	97.740	Microcebus_murinus
ENSCATG00000019284	TNRC6A	99	94.587	ENSMOCG00000000152	Tnrc6a	99	94.272	Microtus_ochrogaster
ENSCATG00000019284	TNRC6A	97	80.822	ENSMODG00000016348	TNRC6A	96	80.923	Monodelphis_domestica
ENSCATG00000019284	TNRC6A	100	92.962	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	93.461	Mus_caroli
ENSCATG00000019284	TNRC6A	99	93.537	ENSMUSG00000052707	Tnrc6a	99	93.817	Mus_musculus
ENSCATG00000019284	TNRC6A	100	93.543	MGP_PahariEiJ_G0013635	Tnrc6a	100	93.959	Mus_pahari
ENSCATG00000019284	TNRC6A	99	91.035	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.674	Mus_spretus
ENSCATG00000019284	TNRC6A	99	83.378	ENSMPUG00000012324	TNRC6A	100	83.859	Mustela_putorius_furo
ENSCATG00000019284	TNRC6A	97	91.571	ENSMLUG00000002701	TNRC6A	100	91.571	Myotis_lucifugus
ENSCATG00000019284	TNRC6A	99	95.168	ENSNGAG00000020702	Tnrc6a	99	95.168	Nannospalax_galili
ENSCATG00000019284	TNRC6A	98	97.567	ENSNLEG00000011851	TNRC6A	99	97.567	Nomascus_leucogenys
ENSCATG00000019284	TNRC6A	75	87.143	ENSMEUG00000015959	-	74	87.143	Notamacropus_eugenii
ENSCATG00000019284	TNRC6A	96	99.627	ENSOPRG00000005819	TNRC6A	95	99.627	Ochotona_princeps
ENSCATG00000019284	TNRC6A	99	90.043	ENSODEG00000012802	TNRC6A	99	89.385	Octodon_degus
ENSCATG00000019284	TNRC6A	87	82.353	ENSOANG00000007672	TNRC6A	99	82.346	Ornithorhynchus_anatinus
ENSCATG00000019284	TNRC6A	97	91.732	ENSOCUG00000004325	TNRC6A	100	91.680	Oryctolagus_cuniculus
ENSCATG00000019284	TNRC6A	99	94.115	ENSOGAG00000006666	TNRC6A	100	94.012	Otolemur_garnettii
ENSCATG00000019284	TNRC6A	99	91.322	ENSOARG00000017950	TNRC6A	98	95.515	Ovis_aries
ENSCATG00000019284	TNRC6A	99	98.949	ENSPPAG00000028379	TNRC6A	99	98.949	Pan_paniscus
ENSCATG00000019284	TNRC6A	99	95.376	ENSPPRG00000005861	TNRC6A	99	95.376	Panthera_pardus
ENSCATG00000019284	TNRC6A	99	94.482	ENSPTIG00000006346	TNRC6A	99	94.535	Panthera_tigris_altaica
ENSCATG00000019284	TNRC6A	98	97.374	ENSPTRG00000007898	TNRC6A	99	97.374	Pan_troglodytes
ENSCATG00000019284	TNRC6A	99	97.162	ENSPANG00000018523	TNRC6A	99	97.388	Papio_anubis
ENSCATG00000019284	TNRC6A	91	78.054	ENSPKIG00000012859	tnrc6a	96	79.459	Paramormyrops_kingsleyae
ENSCATG00000019284	TNRC6A	77	77.635	ENSPSIG00000003965	TNRC6A	100	77.635	Pelodiscus_sinensis
ENSCATG00000019284	TNRC6A	99	94.482	ENSPEMG00000016318	Tnrc6a	99	94.272	Peromyscus_maniculatus_bairdii
ENSCATG00000019284	TNRC6A	98	82.689	ENSPCIG00000012106	TNRC6A	100	82.689	Phascolarctos_cinereus
ENSCATG00000019284	TNRC6A	99	95.953	ENSPPYG00000007202	TNRC6A	98	96.904	Pongo_abelii
ENSCATG00000019284	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	93	100.000	Procavia_capensis
ENSCATG00000019284	TNRC6A	99	95.218	ENSPCOG00000010134	TNRC6A	99	95.218	Propithecus_coquereli
ENSCATG00000019284	TNRC6A	89	68.603	ENSPVAG00000012066	TNRC6A	99	69.005	Pteropus_vampyrus
ENSCATG00000019284	TNRC6A	99	94.275	ENSRNOG00000024737	Tnrc6a	99	94.013	Rattus_norvegicus
ENSCATG00000019284	TNRC6A	99	99.155	ENSRBIG00000014222	TNRC6A	100	99.155	Rhinopithecus_bieti
ENSCATG00000019284	TNRC6A	99	97.053	ENSRROG00000032360	TNRC6A	100	97.053	Rhinopithecus_roxellana
ENSCATG00000019284	TNRC6A	97	96.570	ENSSBOG00000036197	TNRC6A	100	98.252	Saimiri_boliviensis_boliviensis
ENSCATG00000019284	TNRC6A	91	83.875	ENSSHAG00000008811	TNRC6A	99	84.330	Sarcophilus_harrisii
ENSCATG00000019284	TNRC6A	87	67.365	ENSSFOG00015008920	tnrc6a	98	78.004	Scleropages_formosus
ENSCATG00000019284	TNRC6A	72	80.859	ENSSARG00000002479	TNRC6A	89	80.143	Sorex_araneus
ENSCATG00000019284	TNRC6A	90	78.584	ENSSPUG00000010525	TNRC6A	100	78.584	Sphenodon_punctatus
ENSCATG00000019284	TNRC6A	99	96.118	ENSSSCG00000038870	TNRC6A	100	97.651	Sus_scrofa
ENSCATG00000019284	TNRC6A	99	78.400	ENSTGUG00000006142	TNRC6A	99	79.885	Taeniopygia_guttata
ENSCATG00000019284	TNRC6A	97	92.872	ENSTBEG00000014965	TNRC6A	99	92.820	Tupaia_belangeri
ENSCATG00000019284	TNRC6A	91	96.039	ENSTTRG00000002008	TNRC6A	90	96.039	Tursiops_truncatus
ENSCATG00000019284	TNRC6A	80	95.244	ENSUAMG00000006656	-	93	95.244	Ursus_americanus
ENSCATG00000019284	TNRC6A	100	91.430	ENSUMAG00000008274	TNRC6A	100	97.530	Ursus_maritimus
ENSCATG00000019284	TNRC6A	52	96.818	ENSVPAG00000010764	-	52	96.818	Vicugna_pacos
ENSCATG00000019284	TNRC6A	100	96.319	ENSVVUG00000005380	TNRC6A	100	96.319	Vulpes_vulpes
ENSCATG00000019284	TNRC6A	95	63.548	ENSXETG00000030437	TNRC6A	99	65.376	Xenopus_tropicalis