EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000019364 (Gene tree)
Gene ID: 105590150
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 24223 bases
Position: chrKQ009939.1:5435991-5460213
Accession: 105590150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000006208	RTC	PF01137.21	7e-81	1	1
ENSCATP00000006180	RTC	PF01137.21	1.5e-62	1	1
ENSCATP00000006180	RTC_insert	PF05189.13	1.5e-24	1	1
ENSCATP00000006208	RTC_insert	PF05189.13	2.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000022506	RTCA-202	1140	XM_012069393	ENSCATP00000006208	379 (aa)	XP_011924783	A0A2K5KZV6
ENSCATT00000022417	RTCA-201	1610	XM_012069394	ENSCATP00000006180	309 (aa)	XP_011924784	A0A2K5KZQ7

Gene Model

Click here to download ENSCATG00000019364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000019364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000019364	RTCA	100	98.681	ENSG00000137996	RTCA	100	98.681	Homo_sapiens
ENSCATG00000019364	RTCA	100	71.197	ENSAPOG00000001345	rtca	98	69.519	Acanthochromis_polyacanthus
ENSCATG00000019364	RTCA	87	94.796	ENSAMEG00000008855	RTCA	100	94.796	Ailuropoda_melanoleuca
ENSCATG00000019364	RTCA	100	71.845	ENSACIG00000019643	rtca	99	69.786	Amphilophus_citrinellus
ENSCATG00000019364	RTCA	100	71.197	ENSAOCG00000014979	rtca	99	68.865	Amphiprion_ocellaris
ENSCATG00000019364	RTCA	100	71.197	ENSAPEG00000006945	rtca	99	68.865	Amphiprion_percula
ENSCATG00000019364	RTCA	100	71.521	ENSATEG00000006315	rtca	96	69.505	Anabas_testudineus
ENSCATG00000019364	RTCA	100	81.877	ENSAPLG00000015430	RTCA	100	77.384	Anas_platyrhynchos
ENSCATG00000019364	RTCA	100	97.411	ENSANAG00000025446	RTCA	100	96.570	Aotus_nancymaae
ENSCATG00000019364	RTCA	100	70.550	ENSACLG00000020770	rtca	99	68.074	Astatotilapia_calliptera
ENSCATG00000019364	RTCA	100	72.168	ENSAMXG00000043271	rtca	100	70.185	Astyanax_mexicanus
ENSCATG00000019364	RTCA	100	95.146	ENSBTAG00000006321	RTCA	100	92.348	Bos_taurus
ENSCATG00000019364	RTCA	100	97.411	ENSCJAG00000003398	RTCA	100	94.459	Callithrix_jacchus
ENSCATG00000019364	RTCA	100	95.146	ENSCAFG00000020010	RTCA	68	92.084	Canis_familiaris
ENSCATG00000019364	RTCA	100	95.146	ENSCAFG00020011528	RTCA	57	92.084	Canis_lupus_dingo
ENSCATG00000019364	RTCA	100	94.822	ENSCHIG00000018937	RTCA	100	92.084	Capra_hircus
ENSCATG00000019364	RTCA	100	92.557	ENSTSYG00000011305	RTCA	100	91.821	Carlito_syrichta
ENSCATG00000019364	RTCA	100	97.087	ENSCCAG00000021844	RTCA	100	96.834	Cebus_capucinus
ENSCATG00000019364	RTCA	100	95.793	ENSCLAG00000006125	RTCA	100	95.899	Chinchilla_lanigera
ENSCATG00000019364	RTCA	100	99.676	ENSCSAG00000001509	RTCA	100	96.306	Chlorocebus_sabaeus
ENSCATG00000019364	RTCA	100	93.204	ENSCHOG00000005211	RTCA	100	90.237	Choloepus_hoffmanni
ENSCATG00000019364	RTCA	100	82.524	ENSCPBG00000026658	RTCA	100	80.211	Chrysemys_picta_bellii
ENSCATG00000019364	RTCA	100	54.839	ENSCING00000007875	-	98	53.743	Ciona_intestinalis
ENSCATG00000019364	RTCA	100	52.751	ENSCSAVG00000007269	-	98	52.011	Ciona_savignyi
ENSCATG00000019364	RTCA	100	99.472	ENSCANG00000040106	RTCA	100	99.472	Colobus_angolensis_palliatus
ENSCATG00000019364	RTCA	87	91.450	ENSCGRG00001013163	Rtca	85	91.450	Cricetulus_griseus_chok1gshd
ENSCATG00000019364	RTCA	100	68.932	ENSCSEG00000000530	rtca	98	66.402	Cynoglossus_semilaevis
ENSCATG00000019364	RTCA	100	57.256	ENSCVAG00000021809	rtca	100	57.256	Cyprinodon_variegatus
ENSCATG00000019364	RTCA	100	73.463	ENSDARG00000002215	rtca	100	70.976	Danio_rerio
ENSCATG00000019364	RTCA	100	93.851	ENSDNOG00000000456	RTCA	100	90.765	Dasypus_novemcinctus
ENSCATG00000019364	RTCA	100	91.909	ENSDORG00000005448	Rtca	100	89.446	Dipodomys_ordii
ENSCATG00000019364	RTCA	98	37.466	FBgn0025630	Rtca	98	37.466	Drosophila_melanogaster
ENSCATG00000019364	RTCA	96	52.329	ENSEBUG00000008556	rtca	97	52.329	Eptatretus_burgeri
ENSCATG00000019364	RTCA	100	94.498	ENSEASG00005015926	RTCA	100	91.557	Equus_asinus_asinus
ENSCATG00000019364	RTCA	100	94.498	ENSECAG00000019831	RTCA	100	91.557	Equus_caballus
ENSCATG00000019364	RTCA	91	83.237	ENSEEUG00000001165	RTCA	100	83.237	Erinaceus_europaeus
ENSCATG00000019364	RTCA	100	70.550	ENSELUG00000003741	rtca	99	69.519	Esox_lucius
ENSCATG00000019364	RTCA	100	95.146	ENSFCAG00000024460	RTCA	100	92.167	Felis_catus
ENSCATG00000019364	RTCA	89	83.696	ENSFALG00000002443	RTCA	90	80.636	Ficedula_albicollis
ENSCATG00000019364	RTCA	100	95.793	ENSFDAG00000012070	-	100	92.348	Fukomys_damarensis
ENSCATG00000019364	RTCA	98	74.426	ENSFDAG00000016084	-	100	72.000	Fukomys_damarensis
ENSCATG00000019364	RTCA	70	70.233	ENSFHEG00000002868	rtca	96	68.142	Fundulus_heteroclitus
ENSCATG00000019364	RTCA	100	68.608	ENSGMOG00000013264	rtca	100	66.227	Gadus_morhua
ENSCATG00000019364	RTCA	100	82.201	ENSGALG00000005277	RTCA	100	80.211	Gallus_gallus
ENSCATG00000019364	RTCA	100	72.168	ENSGAFG00000011853	rtca	99	69.393	Gambusia_affinis
ENSCATG00000019364	RTCA	100	69.256	ENSGACG00000013497	rtca	100	67.282	Gasterosteus_aculeatus
ENSCATG00000019364	RTCA	81	80.392	ENSGAGG00000023306	RTCA	100	80.392	Gopherus_agassizii
ENSCATG00000019364	RTCA	100	97.411	ENSGGOG00000044018	-	100	94.459	Gorilla_gorilla
ENSCATG00000019364	RTCA	100	98.681	ENSGGOG00000009546	-	100	98.681	Gorilla_gorilla
ENSCATG00000019364	RTCA	100	70.227	ENSHBUG00000002114	rtca	99	67.810	Haplochromis_burtoni
ENSCATG00000019364	RTCA	100	94.498	ENSHGLG00000002617	RTCA	100	91.557	Heterocephalus_glaber_female
ENSCATG00000019364	RTCA	100	94.498	ENSHGLG00100006056	RTCA	100	91.557	Heterocephalus_glaber_male
ENSCATG00000019364	RTCA	100	63.754	ENSHCOG00000020628	rtca	89	62.533	Hippocampus_comes
ENSCATG00000019364	RTCA	100	72.492	ENSIPUG00000024803	rtca	100	70.449	Ictalurus_punctatus
ENSCATG00000019364	RTCA	100	95.146	ENSSTOG00000013528	-	91	95.146	Ictidomys_tridecemlineatus
ENSCATG00000019364	RTCA	100	84.142	ENSSTOG00000033099	-	100	80.526	Ictidomys_tridecemlineatus
ENSCATG00000019364	RTCA	100	64.380	ENSJJAG00000016178	Rtca	100	64.380	Jaculus_jaculus
ENSCATG00000019364	RTCA	100	71.521	ENSKMAG00000006651	rtca	98	69.786	Kryptolebias_marmoratus
ENSCATG00000019364	RTCA	100	68.608	ENSLBEG00000028971	rtca	99	67.112	Labrus_bergylta
ENSCATG00000019364	RTCA	100	68.608	ENSLBEG00000002448	-	98	69.182	Labrus_bergylta
ENSCATG00000019364	RTCA	100	78.964	ENSLACG00000013666	RTCA	100	75.462	Latimeria_chalumnae
ENSCATG00000019364	RTCA	100	72.492	ENSLOCG00000000093	rtca	99	70.449	Lepisosteus_oculatus
ENSCATG00000019364	RTCA	100	92.880	ENSLAFG00000001473	RTCA	100	89.974	Loxodonta_africana
ENSCATG00000019364	RTCA	100	99.736	ENSMFAG00000034132	RTCA	100	99.736	Macaca_fascicularis
ENSCATG00000019364	RTCA	100	99.208	ENSMMUG00000019105	RTCA	100	99.208	Macaca_mulatta
ENSCATG00000019364	RTCA	100	99.676	ENSMNEG00000037163	RTCA	100	99.676	Macaca_nemestrina
ENSCATG00000019364	RTCA	100	82.322	ENSMLEG00000042151	RTCA	100	82.322	Mandrillus_leucophaeus
ENSCATG00000019364	RTCA	100	73.786	ENSMAMG00000016536	rtca	100	70.976	Mastacembelus_armatus
ENSCATG00000019364	RTCA	100	70.550	ENSMZEG00005017945	rtca	99	68.074	Maylandia_zebra
ENSCATG00000019364	RTCA	100	80.906	ENSMGAG00000006892	RTCA	100	80.938	Meleagris_gallopavo
ENSCATG00000019364	RTCA	100	90.939	ENSMAUG00000008488	Rtca	100	88.654	Mesocricetus_auratus
ENSCATG00000019364	RTCA	100	96.117	ENSMICG00000008643	RTCA	100	96.117	Microcebus_murinus
ENSCATG00000019364	RTCA	100	91.586	ENSMOCG00000016660	Rtca	100	88.918	Microtus_ochrogaster
ENSCATG00000019364	RTCA	100	71.845	ENSMMOG00000007750	rtca	100	71.845	Mola_mola
ENSCATG00000019364	RTCA	100	89.644	ENSMODG00000003557	RTCA	100	87.335	Monodelphis_domestica
ENSCATG00000019364	RTCA	100	73.139	ENSMALG00000020844	rtca	100	70.449	Monopterus_albus
ENSCATG00000019364	RTCA	100	90.615	MGP_CAROLIEiJ_G0025565	Rtca	100	90.845	Mus_caroli
ENSCATG00000019364	RTCA	100	89.968	ENSMUSG00000000339	Rtca	100	90.845	Mus_musculus
ENSCATG00000019364	RTCA	100	90.291	MGP_PahariEiJ_G0027011	Rtca	100	90.141	Mus_pahari
ENSCATG00000019364	RTCA	100	90.291	MGP_SPRETEiJ_G0026515	Rtca	100	90.141	Mus_spretus
ENSCATG00000019364	RTCA	100	95.793	ENSMPUG00000012119	RTCA	100	92.348	Mustela_putorius_furo
ENSCATG00000019364	RTCA	100	87.379	ENSMLUG00000009922	RTCA	100	83.947	Myotis_lucifugus
ENSCATG00000019364	RTCA	100	90.939	ENSNGAG00000011540	Rtca	99	88.654	Nannospalax_galili
ENSCATG00000019364	RTCA	100	70.550	ENSNBRG00000003062	rtca	99	68.074	Neolamprologus_brichardi
ENSCATG00000019364	RTCA	100	98.681	ENSNLEG00000031426	RTCA	100	98.681	Nomascus_leucogenys
ENSCATG00000019364	RTCA	77	75.758	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSCATG00000019364	RTCA	87	88.104	ENSOPRG00000012092	RTCA	71	88.104	Ochotona_princeps
ENSCATG00000019364	RTCA	100	95.146	ENSODEG00000006990	RTCA	96	92.033	Octodon_degus
ENSCATG00000019364	RTCA	100	70.550	ENSONIG00000007753	rtca	99	68.074	Oreochromis_niloticus
ENSCATG00000019364	RTCA	100	87.379	ENSOANG00000012055	RTCA	99	85.152	Ornithorhynchus_anatinus
ENSCATG00000019364	RTCA	100	95.793	ENSOCUG00000014247	RTCA	100	92.348	Oryctolagus_cuniculus
ENSCATG00000019364	RTCA	100	70.550	ENSORLG00000013605	rtca	100	68.338	Oryzias_latipes
ENSCATG00000019364	RTCA	100	70.550	ENSORLG00020001904	rtca	100	68.338	Oryzias_latipes_hni
ENSCATG00000019364	RTCA	100	70.550	ENSORLG00015021064	rtca	100	68.338	Oryzias_latipes_hsok
ENSCATG00000019364	RTCA	100	71.845	ENSOMEG00000000756	rtca	100	69.129	Oryzias_melastigma
ENSCATG00000019364	RTCA	99	86.688	ENSOGAG00000005627	RTCA	100	82.850	Otolemur_garnettii
ENSCATG00000019364	RTCA	100	94.175	ENSOARG00000018122	RTCA	100	94.340	Ovis_aries
ENSCATG00000019364	RTCA	100	98.153	ENSPPAG00000035119	RTCA	100	98.153	Pan_paniscus
ENSCATG00000019364	RTCA	100	95.146	ENSPPRG00000000350	RTCA	100	92.167	Panthera_pardus
ENSCATG00000019364	RTCA	100	94.822	ENSPTIG00000012816	RTCA	100	91.906	Panthera_tigris_altaica
ENSCATG00000019364	RTCA	100	98.153	ENSPTRG00000001004	RTCA	100	98.153	Pan_troglodytes
ENSCATG00000019364	RTCA	100	99.029	ENSPANG00000000346	RTCA	100	95.515	Papio_anubis
ENSCATG00000019364	RTCA	100	74.110	ENSPKIG00000001653	rtca	100	71.504	Paramormyrops_kingsleyae
ENSCATG00000019364	RTCA	100	83.172	ENSPSIG00000011408	RTCA	100	80.739	Pelodiscus_sinensis
ENSCATG00000019364	RTCA	100	90.615	ENSPEMG00000018582	Rtca	100	88.127	Peromyscus_maniculatus_bairdii
ENSCATG00000019364	RTCA	100	56.316	ENSPMAG00000009110	rtca	100	56.316	Petromyzon_marinus
ENSCATG00000019364	RTCA	100	89.968	ENSPCIG00000007684	RTCA	100	87.599	Phascolarctos_cinereus
ENSCATG00000019364	RTCA	100	72.816	ENSPFOG00000004824	rtca	100	70.185	Poecilia_formosa
ENSCATG00000019364	RTCA	100	72.816	ENSPLAG00000011753	rtca	99	69.921	Poecilia_latipinna
ENSCATG00000019364	RTCA	100	72.816	ENSPMEG00000020469	rtca	99	69.921	Poecilia_mexicana
ENSCATG00000019364	RTCA	100	73.786	ENSPREG00000001365	rtca	99	70.712	Poecilia_reticulata
ENSCATG00000019364	RTCA	100	98.382	ENSPPYG00000001115	RTCA	100	95.251	Pongo_abelii
ENSCATG00000019364	RTCA	100	90.291	ENSPCAG00000005076	RTCA	100	87.599	Procavia_capensis
ENSCATG00000019364	RTCA	100	96.764	ENSPCOG00000005603	RTCA	100	93.404	Propithecus_coquereli
ENSCATG00000019364	RTCA	100	93.528	ENSPVAG00000009478	RTCA	100	93.404	Pteropus_vampyrus
ENSCATG00000019364	RTCA	100	70.550	ENSPNYG00000004722	rtca	99	68.074	Pundamilia_nyererei
ENSCATG00000019364	RTCA	100	72.816	ENSPNAG00000022270	rtca	100	70.185	Pygocentrus_nattereri
ENSCATG00000019364	RTCA	100	90.615	ENSRNOG00000014575	Rtca	100	88.127	Rattus_norvegicus
ENSCATG00000019364	RTCA	100	98.945	ENSRBIG00000041180	RTCA	100	98.945	Rhinopithecus_bieti
ENSCATG00000019364	RTCA	100	98.945	ENSRROG00000024929	RTCA	100	98.945	Rhinopithecus_roxellana
ENSCATG00000019364	RTCA	100	97.087	ENSSBOG00000028626	RTCA	100	96.042	Saimiri_boliviensis_boliviensis
ENSCATG00000019364	RTCA	100	89.320	ENSSHAG00000001758	RTCA	100	87.071	Sarcophilus_harrisii
ENSCATG00000019364	RTCA	100	68.608	ENSSMAG00000014680	rtca	97	66.756	Scophthalmus_maximus
ENSCATG00000019364	RTCA	100	71.845	ENSSDUG00000015585	rtca	97	69.437	Seriola_dumerili
ENSCATG00000019364	RTCA	100	71.521	ENSSLDG00000018985	rtca	95	69.505	Seriola_lalandi_dorsalis
ENSCATG00000019364	RTCA	100	85.437	ENSSARG00000013993	RTCA	100	85.804	Sorex_araneus
ENSCATG00000019364	RTCA	51	78.981	ENSSPUG00000016255	-	100	78.981	Sphenodon_punctatus
ENSCATG00000019364	RTCA	100	70.874	ENSSPAG00000011938	rtca	99	68.338	Stegastes_partitus
ENSCATG00000019364	RTCA	100	94.498	ENSSSCG00000006865	RTCA	100	91.821	Sus_scrofa
ENSCATG00000019364	RTCA	100	82.848	ENSTGUG00000005154	RTCA	100	80.475	Taeniopygia_guttata
ENSCATG00000019364	RTCA	100	71.521	ENSTRUG00000008799	rtca	100	68.865	Takifugu_rubripes
ENSCATG00000019364	RTCA	100	71.521	ENSTNIG00000004725	rtca	100	69.657	Tetraodon_nigroviridis
ENSCATG00000019364	RTCA	60	89.091	ENSTBEG00000000943	RTCA	82	68.067	Tupaia_belangeri
ENSCATG00000019364	RTCA	100	94.195	ENSTTRG00000015327	RTCA	100	94.195	Tursiops_truncatus
ENSCATG00000019364	RTCA	93	91.958	ENSUAMG00000017265	RTCA	96	89.045	Ursus_americanus
ENSCATG00000019364	RTCA	100	94.498	ENSUMAG00000007881	RTCA	100	91.293	Ursus_maritimus
ENSCATG00000019364	RTCA	100	85.437	ENSVPAG00000001039	RTCA	87	85.455	Vicugna_pacos
ENSCATG00000019364	RTCA	100	94.822	ENSVVUG00000022041	RTCA	68	91.821	Vulpes_vulpes
ENSCATG00000019364	RTCA	99	63.023	ENSXETG00000031661	RTCA	99	62.895	Xenopus_tropicalis
ENSCATG00000019364	RTCA	100	61.489	ENSXCOG00000008002	rtca	100	60.686	Xiphophorus_couchianus
ENSCATG00000019364	RTCA	100	72.492	ENSXMAG00000005482	rtca	99	69.657	Xiphophorus_maculatus