EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000020327 (Gene tree)
Gene ID: 105576175
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 17559 bases
Position: chrKQ012386.1:730931-748489
Accession: 105576175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000006524	zf-C2H2	PF00096.26	1.4e-12	1	2
ENSCATP00000006524	zf-C2H2	PF00096.26	1.4e-12	2	2
ENSCATP00000006524	zf-met	PF12874.7	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000023427	PRDM12-201	2445	XM_012038815	ENSCATP00000006524	363 (aa)	XP_011894205	A0A2K5L0P9

Gene Model

Click here to download ENSCATG00000020327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000020327's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000020327	PRDM12	100	98.638	ENSG00000130711	PRDM12	100	98.638	Homo_sapiens
ENSCATG00000020327	PRDM12	99	63.736	ENSAPOG00000018234	-	93	66.570	Acanthochromis_polyacanthus
ENSCATG00000020327	PRDM12	99	74.740	ENSAPOG00000016051	prdm12b	90	80.290	Acanthochromis_polyacanthus
ENSCATG00000020327	PRDM12	89	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSCATG00000020327	PRDM12	91	79.539	ENSACIG00000019578	prdm12b	93	79.656	Amphilophus_citrinellus
ENSCATG00000020327	PRDM12	99	75.907	ENSACIG00000005193	-	91	80.580	Amphilophus_citrinellus
ENSCATG00000020327	PRDM12	99	75.789	ENSAOCG00000015040	prdm12b	92	79.714	Amphiprion_ocellaris
ENSCATG00000020327	PRDM12	99	76.393	ENSAPEG00000015092	prdm12b	92	80.403	Amphiprion_percula
ENSCATG00000020327	PRDM12	100	72.917	ENSAPEG00000022849	-	89	78.655	Amphiprion_percula
ENSCATG00000020327	PRDM12	99	75.065	ENSATEG00000014595	-	96	82.067	Anabas_testudineus
ENSCATG00000020327	PRDM12	94	100.000	ENSANAG00000020616	PRDM12	100	100.000	Aotus_nancymaae
ENSCATG00000020327	PRDM12	99	77.929	ENSACLG00000011876	prdm12b	92	82.143	Astatotilapia_calliptera
ENSCATG00000020327	PRDM12	89	80.994	ENSACLG00000007631	-	87	80.994	Astatotilapia_calliptera
ENSCATG00000020327	PRDM12	99	82.432	ENSAMXG00000033665	prdm12b	90	88.024	Astyanax_mexicanus
ENSCATG00000020327	PRDM12	99	78.729	ENSAMXG00000008540	PRDM12	90	84.049	Astyanax_mexicanus
ENSCATG00000020327	PRDM12	100	98.623	ENSBTAG00000023797	PRDM12	100	98.623	Bos_taurus
ENSCATG00000020327	PRDM12	100	99.174	ENSCJAG00000020540	PRDM12	100	99.174	Callithrix_jacchus
ENSCATG00000020327	PRDM12	88	98.131	ENSCAFG00000023076	PRDM12	99	98.131	Canis_familiaris
ENSCATG00000020327	PRDM12	100	99.176	ENSCAFG00020024046	PRDM12	100	99.176	Canis_lupus_dingo
ENSCATG00000020327	PRDM12	100	99.174	ENSCHIG00000025005	PRDM12	100	99.174	Capra_hircus
ENSCATG00000020327	PRDM12	94	91.765	ENSCPOG00000005901	PRDM12	95	97.444	Cavia_porcellus
ENSCATG00000020327	PRDM12	100	100.000	ENSCCAG00000037485	PRDM12	100	100.000	Cebus_capucinus
ENSCATG00000020327	PRDM12	92	97.305	ENSCLAG00000005499	PRDM12	92	97.305	Chinchilla_lanigera
ENSCATG00000020327	PRDM12	100	99.725	ENSCSAG00000014756	PRDM12	100	99.725	Chlorocebus_sabaeus
ENSCATG00000020327	PRDM12	100	89.256	ENSCPBG00000022628	PRDM12	94	92.814	Chrysemys_picta_bellii
ENSCATG00000020327	PRDM12	100	97.814	ENSCGRG00001015005	Prdm12	100	97.814	Cricetulus_griseus_chok1gshd
ENSCATG00000020327	PRDM12	99	72.051	ENSCVAG00000000944	-	90	77.493	Cyprinodon_variegatus
ENSCATG00000020327	PRDM12	99	77.419	ENSCVAG00000017166	prdm12b	92	82.111	Cyprinodon_variegatus
ENSCATG00000020327	PRDM12	99	81.941	ENSDARG00000007430	prdm12b	93	85.673	Danio_rerio
ENSCATG00000020327	PRDM12	99	98.072	ENSDNOG00000042302	PRDM12	99	98.072	Dasypus_novemcinctus
ENSCATG00000020327	PRDM12	89	62.963	ENSEBUG00000016780	prdm12b	78	64.387	Eptatretus_burgeri
ENSCATG00000020327	PRDM12	100	98.623	ENSEASG00005008472	PRDM12	100	98.623	Equus_asinus_asinus
ENSCATG00000020327	PRDM12	100	98.347	ENSECAG00000005933	PRDM12	100	98.347	Equus_caballus
ENSCATG00000020327	PRDM12	99	76.503	ENSELUG00000013674	PRDM12	89	83.025	Esox_lucius
ENSCATG00000020327	PRDM12	99	81.117	ENSELUG00000009905	prdm12b	91	86.310	Esox_lucius
ENSCATG00000020327	PRDM12	100	99.449	ENSFCAG00000043086	PRDM12	100	99.449	Felis_catus
ENSCATG00000020327	PRDM12	100	89.532	ENSFALG00000001445	PRDM12	84	93.114	Ficedula_albicollis
ENSCATG00000020327	PRDM12	99	73.590	ENSFHEG00000007746	-	88	79.941	Fundulus_heteroclitus
ENSCATG00000020327	PRDM12	99	76.800	ENSFHEG00000003944	prdm12b	92	81.686	Fundulus_heteroclitus
ENSCATG00000020327	PRDM12	91	81.982	ENSGMOG00000011797	prdm12b	94	81.982	Gadus_morhua
ENSCATG00000020327	PRDM12	100	89.532	ENSGALG00000003895	PRDM12	94	93.114	Gallus_gallus
ENSCATG00000020327	PRDM12	100	77.067	ENSGAFG00000010827	prdm12b	90	82.596	Gambusia_affinis
ENSCATG00000020327	PRDM12	100	77.688	ENSGACG00000016713	prdm12b	91	82.840	Gasterosteus_aculeatus
ENSCATG00000020327	PRDM12	100	89.532	ENSGAGG00000014083	PRDM12	94	93.114	Gopherus_agassizii
ENSCATG00000020327	PRDM12	100	98.634	ENSGGOG00000010568	PRDM12	100	98.634	Gorilla_gorilla
ENSCATG00000020327	PRDM12	89	80.994	ENSHBUG00000022537	-	80	80.994	Haplochromis_burtoni
ENSCATG00000020327	PRDM12	99	76.455	ENSHBUG00000022878	prdm12b	93	81.268	Haplochromis_burtoni
ENSCATG00000020327	PRDM12	100	96.164	ENSHGLG00000013939	PRDM12	100	96.164	Heterocephalus_glaber_female
ENSCATG00000020327	PRDM12	99	72.900	ENSHCOG00000021167	-	95	75.882	Hippocampus_comes
ENSCATG00000020327	PRDM12	89	80.702	ENSHCOG00000003663	prdm12b	89	79.370	Hippocampus_comes
ENSCATG00000020327	PRDM12	99	75.956	ENSIPUG00000019544	PRDM12	90	82.012	Ictalurus_punctatus
ENSCATG00000020327	PRDM12	99	81.720	ENSIPUG00000017053	prdm12b	91	87.126	Ictalurus_punctatus
ENSCATG00000020327	PRDM12	99	94.737	ENSSTOG00000005986	PRDM12	87	98.802	Ictidomys_tridecemlineatus
ENSCATG00000020327	PRDM12	91	98.485	ENSJJAG00000005424	Prdm12	100	98.485	Jaculus_jaculus
ENSCATG00000020327	PRDM12	99	75.683	ENSKMAG00000021205	-	92	81.040	Kryptolebias_marmoratus
ENSCATG00000020327	PRDM12	90	77.562	ENSKMAG00000016921	prdm12b	89	78.212	Kryptolebias_marmoratus
ENSCATG00000020327	PRDM12	99	74.611	ENSLBEG00000007776	-	89	81.306	Labrus_bergylta
ENSCATG00000020327	PRDM12	99	76.984	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSCATG00000020327	PRDM12	99	86.740	ENSLACG00000017560	PRDM12	94	90.090	Latimeria_chalumnae
ENSCATG00000020327	PRDM12	99	81.522	ENSLOCG00000005429	prdm12b	93	86.726	Lepisosteus_oculatus
ENSCATG00000020327	PRDM12	99	95.082	ENSLAFG00000006979	PRDM12	98	95.082	Loxodonta_africana
ENSCATG00000020327	PRDM12	100	97.275	ENSMFAG00000040322	PRDM12	100	97.275	Macaca_fascicularis
ENSCATG00000020327	PRDM12	100	100.000	ENSMNEG00000037234	PRDM12	100	100.000	Macaca_nemestrina
ENSCATG00000020327	PRDM12	89	80.952	ENSMAMG00000018988	-	86	80.952	Mastacembelus_armatus
ENSCATG00000020327	PRDM12	99	75.916	ENSMAMG00000013212	prdm12b	90	83.086	Mastacembelus_armatus
ENSCATG00000020327	PRDM12	89	80.994	ENSMZEG00005000415	PRDM12	86	80.994	Maylandia_zebra
ENSCATG00000020327	PRDM12	98	89.916	ENSMGAG00000005438	PRDM12	94	93.114	Meleagris_gallopavo
ENSCATG00000020327	PRDM12	100	96.438	ENSMAUG00000013040	Prdm12	100	96.438	Mesocricetus_auratus
ENSCATG00000020327	PRDM12	100	98.072	ENSMICG00000015480	PRDM12	100	98.072	Microcebus_murinus
ENSCATG00000020327	PRDM12	98	95.763	ENSMOCG00000021026	Prdm12	93	98.246	Microtus_ochrogaster
ENSCATG00000020327	PRDM12	100	91.460	ENSMODG00000012108	PRDM12	94	95.210	Monodelphis_domestica
ENSCATG00000020327	PRDM12	99	66.577	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSCATG00000020327	PRDM12	100	97.808	MGP_CAROLIEiJ_G0023414	Prdm12	100	97.808	Mus_caroli
ENSCATG00000020327	PRDM12	100	97.808	ENSMUSG00000079466	Prdm12	100	97.808	Mus_musculus
ENSCATG00000020327	PRDM12	100	97.808	MGP_PahariEiJ_G0024871	Prdm12	100	97.808	Mus_pahari
ENSCATG00000020327	PRDM12	100	97.808	MGP_SPRETEiJ_G0024331	Prdm12	100	97.808	Mus_spretus
ENSCATG00000020327	PRDM12	100	94.766	ENSNGAG00000018480	Prdm12	100	94.766	Nannospalax_galili
ENSCATG00000020327	PRDM12	99	72.118	ENSNBRG00000024312	-	95	76.316	Neolamprologus_brichardi
ENSCATG00000020327	PRDM12	99	75.462	ENSNBRG00000006727	prdm12b	93	80.571	Neolamprologus_brichardi
ENSCATG00000020327	PRDM12	100	81.543	ENSMEUG00000003828	PRDM12	94	84.431	Notamacropus_eugenii
ENSCATG00000020327	PRDM12	91	98.182	ENSOPRG00000008680	PRDM12	100	98.182	Ochotona_princeps
ENSCATG00000020327	PRDM12	94	97.668	ENSODEG00000016282	PRDM12	64	97.668	Octodon_degus
ENSCATG00000020327	PRDM12	62	89.381	ENSOANG00000001043	PRDM12	91	95.939	Ornithorhynchus_anatinus
ENSCATG00000020327	PRDM12	86	92.971	ENSOCUG00000008241	PRDM12	98	94.098	Oryctolagus_cuniculus
ENSCATG00000020327	PRDM12	89	79.472	ENSORLG00000017558	-	87	80.059	Oryzias_latipes
ENSCATG00000020327	PRDM12	100	75.521	ENSORLG00000007114	prdm12b	92	81.268	Oryzias_latipes
ENSCATG00000020327	PRDM12	91	80.115	ENSORLG00020019565	prdm12b	91	80.980	Oryzias_latipes_hni
ENSCATG00000020327	PRDM12	89	79.240	ENSORLG00020013167	-	87	79.825	Oryzias_latipes_hni
ENSCATG00000020327	PRDM12	99	75.266	ENSORLG00015007621	prdm12b	92	80.692	Oryzias_latipes_hsok
ENSCATG00000020327	PRDM12	89	79.472	ENSORLG00015003435	-	87	80.059	Oryzias_latipes_hsok
ENSCATG00000020327	PRDM12	99	73.766	ENSOMEG00000007762	-	94	78.348	Oryzias_melastigma
ENSCATG00000020327	PRDM12	100	74.674	ENSOMEG00000004134	prdm12b	91	80.000	Oryzias_melastigma
ENSCATG00000020327	PRDM12	92	99.399	ENSOGAG00000007557	PRDM12	100	99.399	Otolemur_garnettii
ENSCATG00000020327	PRDM12	79	99.303	ENSPPAG00000031506	-	97	99.303	Pan_paniscus
ENSCATG00000020327	PRDM12	100	87.363	ENSPPRG00000023024	PRDM12	86	90.746	Panthera_pardus
ENSCATG00000020327	PRDM12	100	98.907	ENSPTRG00000043324	-	100	98.907	Pan_troglodytes
ENSCATG00000020327	PRDM12	100	98.907	ENSPTRG00000021475	PRDM12	100	98.907	Pan_troglodytes
ENSCATG00000020327	PRDM12	100	100.000	ENSPANG00000025967	PRDM12	100	100.000	Papio_anubis
ENSCATG00000020327	PRDM12	94	78.063	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSCATG00000020327	PRDM12	99	80.902	ENSPKIG00000007228	prdm12b	94	85.345	Paramormyrops_kingsleyae
ENSCATG00000020327	PRDM12	100	88.705	ENSPSIG00000006739	PRDM12	94	92.216	Pelodiscus_sinensis
ENSCATG00000020327	PRDM12	99	73.368	ENSPMGG00000002356	-	88	81.250	Periophthalmus_magnuspinnatus
ENSCATG00000020327	PRDM12	100	77.688	ENSPMGG00000008867	prdm12b	92	81.924	Periophthalmus_magnuspinnatus
ENSCATG00000020327	PRDM12	95	95.389	ENSPEMG00000009969	Prdm12	91	98.494	Peromyscus_maniculatus_bairdii
ENSCATG00000020327	PRDM12	100	91.736	ENSPCIG00000024119	PRDM12	94	95.509	Phascolarctos_cinereus
ENSCATG00000020327	PRDM12	99	77.540	ENSPFOG00000019841	prdm12b	93	82.216	Poecilia_formosa
ENSCATG00000020327	PRDM12	91	83.036	ENSPLAG00000016626	prdm12b	90	82.891	Poecilia_latipinna
ENSCATG00000020327	PRDM12	97	76.630	ENSPMEG00000016698	prdm12b	89	82.371	Poecilia_mexicana
ENSCATG00000020327	PRDM12	91	82.891	ENSPREG00000015073	prdm12b	89	82.749	Poecilia_reticulata
ENSCATG00000020327	PRDM12	96	73.407	ENSPREG00000003211	-	90	78.049	Poecilia_reticulata
ENSCATG00000020327	PRDM12	97	97.721	ENSPPYG00000019694	PRDM12	100	97.721	Pongo_abelii
ENSCATG00000020327	PRDM12	100	98.361	ENSPCOG00000022255	PRDM12	100	98.361	Propithecus_coquereli
ENSCATG00000020327	PRDM12	100	97.541	ENSPVAG00000001511	PRDM12	100	97.541	Pteropus_vampyrus
ENSCATG00000020327	PRDM12	99	75.789	ENSPNYG00000009607	prdm12b	93	80.516	Pundamilia_nyererei
ENSCATG00000020327	PRDM12	89	80.994	ENSPNYG00000013589	-	86	80.994	Pundamilia_nyererei
ENSCATG00000020327	PRDM12	99	82.880	ENSPNAG00000024532	prdm12b	91	88.323	Pygocentrus_nattereri
ENSCATG00000020327	PRDM12	99	74.462	ENSPNAG00000013396	PRDM12	88	80.606	Pygocentrus_nattereri
ENSCATG00000020327	PRDM12	100	97.808	ENSRNOG00000009218	Prdm12	100	97.808	Rattus_norvegicus
ENSCATG00000020327	PRDM12	87	100.000	ENSRBIG00000042712	PRDM12	91	97.568	Rhinopithecus_bieti
ENSCATG00000020327	PRDM12	88	100.000	ENSRROG00000043554	PRDM12	100	100.000	Rhinopithecus_roxellana
ENSCATG00000020327	PRDM12	100	90.934	ENSSHAG00000015972	PRDM12	94	94.627	Sarcophilus_harrisii
ENSCATG00000020327	PRDM12	99	73.469	ENSSMAG00000003754	prdm12b	90	79.772	Scophthalmus_maximus
ENSCATG00000020327	PRDM12	99	75.000	ENSSDUG00000023498	prdm12b	90	80.925	Seriola_dumerili
ENSCATG00000020327	PRDM12	93	81.105	ENSSDUG00000019071	-	90	83.180	Seriola_dumerili
ENSCATG00000020327	PRDM12	99	75.328	ENSSLDG00000009557	prdm12b	90	81.341	Seriola_lalandi_dorsalis
ENSCATG00000020327	PRDM12	99	78.356	ENSSLDG00000013562	-	93	84.049	Seriola_lalandi_dorsalis
ENSCATG00000020327	PRDM12	100	88.981	ENSSPUG00000013424	PRDM12	94	92.515	Sphenodon_punctatus
ENSCATG00000020327	PRDM12	89	71.976	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSCATG00000020327	PRDM12	99	75.591	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSCATG00000020327	PRDM12	100	99.176	ENSSSCG00000005703	PRDM12	100	99.176	Sus_scrofa
ENSCATG00000020327	PRDM12	99	75.676	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSCATG00000020327	PRDM12	99	77.188	ENSTRUG00000018659	prdm12b	92	82.111	Takifugu_rubripes
ENSCATG00000020327	PRDM12	99	75.477	ENSTNIG00000005859	-	92	80.547	Tetraodon_nigroviridis
ENSCATG00000020327	PRDM12	99	77.513	ENSTNIG00000009020	prdm12b	91	83.186	Tetraodon_nigroviridis
ENSCATG00000020327	PRDM12	96	98.567	ENSUAMG00000009653	PRDM12	97	98.567	Ursus_americanus
ENSCATG00000020327	PRDM12	91	99.398	ENSVVUG00000027662	PRDM12	79	99.398	Vulpes_vulpes
ENSCATG00000020327	PRDM12	100	77.480	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSCATG00000020327	PRDM12	99	74.219	ENSXMAG00000028012	-	88	80.000	Xiphophorus_maculatus
ENSCATG00000020327	PRDM12	99	77.067	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus