EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000020915 (Gene tree)
Gene ID: 105593241
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 25942 bases
Position: chrKQ010356.1:756040-781981
Accession: 105593241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000006798	zf-C2H2	PF00096.26	5.8e-37	1	6
ENSCATP00000006798	zf-C2H2	PF00096.26	5.8e-37	2	6
ENSCATP00000006798	zf-C2H2	PF00096.26	5.8e-37	3	6
ENSCATP00000006798	zf-C2H2	PF00096.26	5.8e-37	4	6
ENSCATP00000006798	zf-C2H2	PF00096.26	5.8e-37	5	6
ENSCATP00000006798	zf-C2H2	PF00096.26	5.8e-37	6	6
ENSCATP00000006794	zf-C2H2	PF00096.26	1.4e-36	1	6
ENSCATP00000006794	zf-C2H2	PF00096.26	1.4e-36	2	6
ENSCATP00000006794	zf-C2H2	PF00096.26	1.4e-36	3	6
ENSCATP00000006794	zf-C2H2	PF00096.26	1.4e-36	4	6
ENSCATP00000006794	zf-C2H2	PF00096.26	1.4e-36	5	6
ENSCATP00000006794	zf-C2H2	PF00096.26	1.4e-36	6	6
ENSCATP00000006798	zf-met	PF12874.7	0.00018	1	1
ENSCATP00000006794	zf-met	PF12874.7	0.00043	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000024143	ZNF550-203	1131	-	ENSCATP00000006798	376 (aa)	-	A0A2K5L1I3
ENSCATT00000024136	ZNF550-202	2429	XM_012076183	ENSCATP00000006794	417 (aa)	XP_011931573	A0A2K5L1H4
ENSCATT00000024121	ZNF550-201	378	-	ENSCATP00000006787	125 (aa)	-	A0A2K5L1F4

Gene Model

Click here to download ENSCATG00000020915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000020915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000020915	ZNF550	99	55.429	ENSCATG00000039477	ZFP1	98	55.429
ENSCATG00000020915	ZNF550	99	54.808	ENSCATG00000036391	ZNF701	99	54.808
ENSCATG00000020915	ZNF550	99	53.757	ENSCATG00000033626	ZNF670	99	53.757
ENSCATG00000020915	ZNF550	100	40.194	ENSCATG00000031370	ZNF205	74	39.302
ENSCATG00000020915	ZNF550	99	59.701	ENSCATG00000031926	ZNF454	98	59.701
ENSCATG00000020915	ZNF550	99	55.702	ENSCATG00000035865	ZNF226	97	49.115
ENSCATG00000020915	ZNF550	99	53.540	ENSCATG00000042172	-	99	53.333
ENSCATG00000020915	ZNF550	98	57.078	ENSCATG00000035067	ZNF2	95	57.078
ENSCATG00000020915	ZNF550	99	60.500	ENSCATG00000003472	ZNF829	77	60.500
ENSCATG00000020915	ZNF550	99	62.115	ENSCATG00000036892	ZNF582	87	62.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000020915	ZNF550	100	95.801	ENSG00000251369	ZNF550	100	95.801	Homo_sapiens
ENSCATG00000020915	ZNF550	100	63.446	ENSCLAG00000000250	ZNF550	95	68.449	Chinchilla_lanigera
ENSCATG00000020915	ZNF550	98	99.020	ENSCSAG00000001629	ZNF550	100	99.020	Chlorocebus_sabaeus
ENSCATG00000020915	ZNF550	100	97.872	ENSCANG00000033735	ZNF550	100	97.872	Colobus_angolensis_palliatus
ENSCATG00000020915	ZNF550	89	72.434	ENSDNOG00000033330	-	99	72.269	Dasypus_novemcinctus
ENSCATG00000020915	ZNF550	99	68.766	ENSFCAG00000034766	ZNF550	99	68.766	Felis_catus
ENSCATG00000020915	ZNF550	100	95.276	ENSGGOG00000014068	ZNF550	100	95.276	Gorilla_gorilla
ENSCATG00000020915	ZNF550	100	71.360	ENSHGLG00000018048	ZNF550	100	71.360	Heterocephalus_glaber_female
ENSCATG00000020915	ZNF550	100	99.041	ENSMFAG00000036005	ZNF550	100	99.041	Macaca_fascicularis
ENSCATG00000020915	ZNF550	100	98.670	ENSMMUG00000006122	ZNF550	100	98.670	Macaca_mulatta
ENSCATG00000020915	ZNF550	100	99.041	ENSMNEG00000041366	ZNF550	100	99.041	Macaca_nemestrina
ENSCATG00000020915	ZNF550	100	99.760	ENSMLEG00000034688	ZNF550	100	99.760	Mandrillus_leucophaeus
ENSCATG00000020915	ZNF550	100	83.246	ENSMICG00000007561	ZNF550	100	83.246	Microcebus_murinus
ENSCATG00000020915	ZNF550	99	68.504	ENSPPRG00000013475	ZNF550	99	68.504	Panthera_pardus
ENSCATG00000020915	ZNF550	100	67.550	ENSPTIG00000018007	ZNF550	80	67.365	Panthera_tigris_altaica
ENSCATG00000020915	ZNF550	100	95.276	ENSPTRG00000011560	ZNF550	100	95.276	Pan_troglodytes
ENSCATG00000020915	ZNF550	100	99.202	ENSPANG00000030602	ZNF550	100	99.202	Papio_anubis
ENSCATG00000020915	ZNF550	100	85.343	ENSPCOG00000018751	ZNF550	100	85.343	Propithecus_coquereli
ENSCATG00000020915	ZNF550	99	71.875	ENSPVAG00000000908	ZNF550	100	71.875	Pteropus_vampyrus
ENSCATG00000020915	ZNF550	100	99.041	ENSRBIG00000017275	ZNF550	100	99.041	Rhinopithecus_bieti
ENSCATG00000020915	ZNF550	100	99.041	ENSRROG00000040063	ZNF550	100	99.041	Rhinopithecus_roxellana
ENSCATG00000020915	ZNF550	98	78.502	ENSTTRG00000000293	ZNF550	100	78.502	Tursiops_truncatus