EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000021552 (Gene tree)
Gene ID: 105600997
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 17873 bases
Position: chrKQ009526.1:10131077-10148949
Accession: 105600997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000007195	PRP4	PF08799.11	7.6e-14	1	1
ENSCATP00000007216	PRP4	PF08799.11	8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000025065	PRPF4-201	3176	XM_012092717	ENSCATP00000007195	521 (aa)	XP_011948107	A0A2K5L2L1
ENSCATT00000025117	PRPF4-202	1632	-	ENSCATP00000007216	543 (aa)	-	A0A2K5L2P1

Gene Model

Click here to download ENSCATG00000021552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000021552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000021552	PRPF4	56	33.898	ENSCATG00000036201	POC1B	63	33.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000021552	PRPF4	100	99.232	ENSG00000136875	PRPF4	100	99.232	Homo_sapiens
ENSCATG00000021552	PRPF4	96	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSCATG00000021552	PRPF4	100	99.424	ENSAMEG00000013048	PRPF4	100	98.502	Ailuropoda_melanoleuca
ENSCATG00000021552	PRPF4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSCATG00000021552	PRPF4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSCATG00000021552	PRPF4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSCATG00000021552	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSCATG00000021552	PRPF4	100	89.251	ENSAPLG00000006534	PRPF4	98	88.952	Anas_platyrhynchos
ENSCATG00000021552	PRPF4	100	89.866	ENSACAG00000015110	PRPF4	100	88.910	Anolis_carolinensis
ENSCATG00000021552	PRPF4	100	99.616	ENSANAG00000022464	PRPF4	100	97.974	Aotus_nancymaae
ENSCATG00000021552	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSCATG00000021552	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSCATG00000021552	PRPF4	100	98.848	ENSBTAG00000004571	PRPF4	100	98.848	Bos_taurus
ENSCATG00000021552	PRPF4	90	44.093	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSCATG00000021552	PRPF4	100	99.425	ENSCJAG00000017856	PRPF4	100	99.425	Callithrix_jacchus
ENSCATG00000021552	PRPF4	100	99.424	ENSCAFG00000003224	PRPF4	99	98.876	Canis_familiaris
ENSCATG00000021552	PRPF4	100	99.424	ENSCAFG00020022637	PRPF4	100	99.424	Canis_lupus_dingo
ENSCATG00000021552	PRPF4	100	99.042	ENSCHIG00000024648	-	100	99.042	Capra_hircus
ENSCATG00000021552	PRPF4	100	99.616	ENSTSYG00000010366	PRPF4	100	99.616	Carlito_syrichta
ENSCATG00000021552	PRPF4	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSCATG00000021552	PRPF4	100	92.322	ENSCPOG00000014729	-	100	92.322	Cavia_porcellus
ENSCATG00000021552	PRPF4	100	98.848	ENSCPOG00000010747	-	100	98.848	Cavia_porcellus
ENSCATG00000021552	PRPF4	100	99.424	ENSCCAG00000028990	PRPF4	100	99.424	Cebus_capucinus
ENSCATG00000021552	PRPF4	100	99.040	ENSCLAG00000013448	PRPF4	100	99.040	Chinchilla_lanigera
ENSCATG00000021552	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSCATG00000021552	PRPF4	99	91.456	ENSCPBG00000019136	PRPF4	73	92.277	Chrysemys_picta_bellii
ENSCATG00000021552	PRPF4	96	59.252	ENSCING00000001299	-	97	58.614	Ciona_intestinalis
ENSCATG00000021552	PRPF4	96	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSCATG00000021552	PRPF4	100	99.808	ENSCANG00000003246	PRPF4	100	99.808	Colobus_angolensis_palliatus
ENSCATG00000021552	PRPF4	100	99.232	ENSCGRG00001016992	Prpf4	100	99.232	Cricetulus_griseus_chok1gshd
ENSCATG00000021552	PRPF4	100	99.232	ENSCGRG00000017560	Prpf4	100	99.232	Cricetulus_griseus_crigri
ENSCATG00000021552	PRPF4	97	75.842	ENSCSEG00000020451	prpf4	99	75.842	Cynoglossus_semilaevis
ENSCATG00000021552	PRPF4	97	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSCATG00000021552	PRPF4	100	98.851	ENSDNOG00000013203	PRPF4	100	98.851	Dasypus_novemcinctus
ENSCATG00000021552	PRPF4	100	99.232	ENSDORG00000026275	Prpf4	100	99.232	Dipodomys_ordii
ENSCATG00000021552	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSCATG00000021552	PRPF4	100	97.323	ENSETEG00000020389	PRPF4	100	97.323	Echinops_telfairi
ENSCATG00000021552	PRPF4	95	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSCATG00000021552	PRPF4	100	99.616	ENSEASG00005022678	PRPF4	100	99.616	Equus_asinus_asinus
ENSCATG00000021552	PRPF4	100	99.616	ENSECAG00000007072	PRPF4	100	99.616	Equus_caballus
ENSCATG00000021552	PRPF4	100	78.166	ENSEEUG00000007480	PRPF4	100	78.166	Erinaceus_europaeus
ENSCATG00000021552	PRPF4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSCATG00000021552	PRPF4	100	99.425	ENSFCAG00000005514	PRPF4	100	99.425	Felis_catus
ENSCATG00000021552	PRPF4	98	88.117	ENSFALG00000005423	PRPF4	85	89.474	Ficedula_albicollis
ENSCATG00000021552	PRPF4	100	98.848	ENSFDAG00000005839	PRPF4	100	98.848	Fukomys_damarensis
ENSCATG00000021552	PRPF4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSCATG00000021552	PRPF4	98	90.215	ENSGALG00000008857	PRPF4	93	91.417	Gallus_gallus
ENSCATG00000021552	PRPF4	65	71.176	ENSGAFG00000012164	prpf4	66	73.602	Gambusia_affinis
ENSCATG00000021552	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSCATG00000021552	PRPF4	99	91.262	ENSGAGG00000025029	PRPF4	94	92.079	Gopherus_agassizii
ENSCATG00000021552	PRPF4	100	99.232	ENSGGOG00000006943	PRPF4	100	99.232	Gorilla_gorilla
ENSCATG00000021552	PRPF4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSCATG00000021552	PRPF4	100	98.848	ENSHGLG00000015191	PRPF4	100	98.848	Heterocephalus_glaber_female
ENSCATG00000021552	PRPF4	100	80.230	ENSHGLG00000003838	-	100	80.230	Heterocephalus_glaber_female
ENSCATG00000021552	PRPF4	100	81.836	ENSHGLG00000016628	-	100	82.600	Heterocephalus_glaber_female
ENSCATG00000021552	PRPF4	100	80.230	ENSHGLG00100005571	-	100	80.230	Heterocephalus_glaber_male
ENSCATG00000021552	PRPF4	97	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSCATG00000021552	PRPF4	100	99.040	ENSSTOG00000027833	PRPF4	100	99.040	Ictidomys_tridecemlineatus
ENSCATG00000021552	PRPF4	100	99.232	ENSJJAG00000008838	Prpf4	100	99.232	Jaculus_jaculus
ENSCATG00000021552	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSCATG00000021552	PRPF4	96	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSCATG00000021552	PRPF4	99	80.347	ENSLACG00000016317	PRPF4	97	81.657	Latimeria_chalumnae
ENSCATG00000021552	PRPF4	97	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSCATG00000021552	PRPF4	100	98.851	ENSLAFG00000018225	PRPF4	100	98.851	Loxodonta_africana
ENSCATG00000021552	PRPF4	100	99.808	ENSMFAG00000039397	PRPF4	100	99.808	Macaca_fascicularis
ENSCATG00000021552	PRPF4	100	100.000	ENSMMUG00000005844	PRPF4	100	100.000	Macaca_mulatta
ENSCATG00000021552	PRPF4	100	89.443	ENSMNEG00000033737	PRPF4	100	89.443	Macaca_nemestrina
ENSCATG00000021552	PRPF4	100	100.000	ENSMLEG00000040284	PRPF4	100	100.000	Mandrillus_leucophaeus
ENSCATG00000021552	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSCATG00000021552	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSCATG00000021552	PRPF4	99	88.269	ENSMGAG00000001796	PRPF4	100	86.778	Meleagris_gallopavo
ENSCATG00000021552	PRPF4	100	98.656	ENSMAUG00000018022	Prpf4	100	98.656	Mesocricetus_auratus
ENSCATG00000021552	PRPF4	100	98.656	ENSMICG00000015022	PRPF4	100	98.467	Microcebus_murinus
ENSCATG00000021552	PRPF4	100	98.656	ENSMOCG00000018273	Prpf4	100	98.656	Microtus_ochrogaster
ENSCATG00000021552	PRPF4	97	74.556	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSCATG00000021552	PRPF4	100	95.220	ENSMODG00000025096	-	99	93.657	Monodelphis_domestica
ENSCATG00000021552	PRPF4	100	95.029	ENSMODG00000004444	-	100	95.029	Monodelphis_domestica
ENSCATG00000021552	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSCATG00000021552	PRPF4	100	99.040	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.040	Mus_caroli
ENSCATG00000021552	PRPF4	100	99.040	ENSMUSG00000066148	Prpf4	100	99.040	Mus_musculus
ENSCATG00000021552	PRPF4	100	98.848	MGP_PahariEiJ_G0028413	Prpf4	100	98.848	Mus_pahari
ENSCATG00000021552	PRPF4	100	99.040	MGP_SPRETEiJ_G0027042	Prpf4	100	99.040	Mus_spretus
ENSCATG00000021552	PRPF4	100	99.424	ENSMPUG00000007883	PRPF4	100	99.424	Mustela_putorius_furo
ENSCATG00000021552	PRPF4	100	99.040	ENSMLUG00000015309	-	99	98.311	Myotis_lucifugus
ENSCATG00000021552	PRPF4	100	97.121	ENSMLUG00000008626	-	99	96.415	Myotis_lucifugus
ENSCATG00000021552	PRPF4	100	93.858	ENSNGAG00000000468	Prpf4	100	93.858	Nannospalax_galili
ENSCATG00000021552	PRPF4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSCATG00000021552	PRPF4	100	99.616	ENSNLEG00000016647	PRPF4	100	99.616	Nomascus_leucogenys
ENSCATG00000021552	PRPF4	99	95.331	ENSMEUG00000013256	PRPF4	98	96.245	Notamacropus_eugenii
ENSCATG00000021552	PRPF4	100	98.659	ENSOPRG00000005302	PRPF4	100	98.659	Ochotona_princeps
ENSCATG00000021552	PRPF4	100	99.232	ENSODEG00000018147	PRPF4	100	99.232	Octodon_degus
ENSCATG00000021552	PRPF4	99	75.287	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSCATG00000021552	PRPF4	100	99.424	ENSOCUG00000005046	PRPF4	100	99.424	Oryctolagus_cuniculus
ENSCATG00000021552	PRPF4	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSCATG00000021552	PRPF4	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSCATG00000021552	PRPF4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSCATG00000021552	PRPF4	100	94.242	ENSOGAG00000007802	PRPF4	100	93.071	Otolemur_garnettii
ENSCATG00000021552	PRPF4	100	99.232	ENSOARG00000006319	PRPF4	100	97.790	Ovis_aries
ENSCATG00000021552	PRPF4	100	99.232	ENSPPAG00000041797	PRPF4	100	99.232	Pan_paniscus
ENSCATG00000021552	PRPF4	100	99.616	ENSPPRG00000014360	PRPF4	100	99.616	Panthera_pardus
ENSCATG00000021552	PRPF4	100	99.616	ENSPTIG00000009574	PRPF4	100	99.616	Panthera_tigris_altaica
ENSCATG00000021552	PRPF4	100	99.232	ENSPTRG00000021274	PRPF4	100	99.042	Pan_troglodytes
ENSCATG00000021552	PRPF4	100	99.808	ENSPANG00000025776	PRPF4	100	99.632	Papio_anubis
ENSCATG00000021552	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSCATG00000021552	PRPF4	100	89.827	ENSPSIG00000010713	PRPF4	89	91.881	Pelodiscus_sinensis
ENSCATG00000021552	PRPF4	99	58.716	ENSPMGG00000000997	prpf4	98	59.252	Periophthalmus_magnuspinnatus
ENSCATG00000021552	PRPF4	100	99.232	ENSPEMG00000024115	Prpf4	100	99.232	Peromyscus_maniculatus_bairdii
ENSCATG00000021552	PRPF4	99	95.331	ENSPCIG00000003821	PRPF4	98	96.245	Phascolarctos_cinereus
ENSCATG00000021552	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSCATG00000021552	PRPF4	83	71.560	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSCATG00000021552	PRPF4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSCATG00000021552	PRPF4	98	99.220	ENSPCAG00000002561	PRPF4	99	99.220	Procavia_capensis
ENSCATG00000021552	PRPF4	100	99.040	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSCATG00000021552	PRPF4	100	95.402	ENSPVAG00000004708	PRPF4	100	94.444	Pteropus_vampyrus
ENSCATG00000021552	PRPF4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSCATG00000021552	PRPF4	97	80.396	ENSPNAG00000000697	prpf4	99	80.396	Pygocentrus_nattereri
ENSCATG00000021552	PRPF4	100	98.848	ENSRNOG00000014777	Prpf4	100	98.848	Rattus_norvegicus
ENSCATG00000021552	PRPF4	100	99.808	ENSRBIG00000040221	PRPF4	100	99.808	Rhinopithecus_bieti
ENSCATG00000021552	PRPF4	100	99.808	ENSRROG00000040240	PRPF4	100	99.808	Rhinopithecus_roxellana
ENSCATG00000021552	PRPF4	100	95.602	ENSSHAG00000017658	PRPF4	100	95.602	Sarcophilus_harrisii
ENSCATG00000021552	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSCATG00000021552	PRPF4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSCATG00000021552	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSCATG00000021552	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSCATG00000021552	PRPF4	100	90.403	ENSSPUG00000015582	PRPF4	100	90.019	Sphenodon_punctatus
ENSCATG00000021552	PRPF4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSCATG00000021552	PRPF4	100	99.616	ENSSSCG00000024648	PRPF4	100	99.616	Sus_scrofa
ENSCATG00000021552	PRPF4	95	90.467	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSCATG00000021552	PRPF4	97	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSCATG00000021552	PRPF4	97	74.851	ENSTNIG00000013250	prpf4	99	74.851	Tetraodon_nigroviridis
ENSCATG00000021552	PRPF4	100	90.421	ENSTBEG00000000821	PRPF4	100	90.421	Tupaia_belangeri
ENSCATG00000021552	PRPF4	82	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSCATG00000021552	PRPF4	64	96.108	ENSUAMG00000018288	PRPF4	90	96.108	Ursus_americanus
ENSCATG00000021552	PRPF4	100	98.848	ENSUMAG00000019375	PRPF4	100	98.848	Ursus_maritimus
ENSCATG00000021552	PRPF4	100	98.851	ENSVPAG00000005281	PRPF4	100	98.851	Vicugna_pacos
ENSCATG00000021552	PRPF4	100	98.286	ENSVVUG00000002476	PRPF4	100	98.422	Vulpes_vulpes
ENSCATG00000021552	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.653	Xiphophorus_couchianus
ENSCATG00000021552	PRPF4	88	64.410	ENSXMAG00000002750	prpf4	98	65.408	Xiphophorus_maculatus