EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000021854 (Gene tree)
Gene ID: 105571430
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 9000 bases
Position: chrKQ011504.1:13280764-13289763
Accession: 105571430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000007331	Gar1	PF04410.14	1.1e-38	1	1
ENSCATP00000007352	Gar1	PF04410.14	1.5e-38	1	1
ENSCATP00000007362	Gar1	PF04410.14	1.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000025461	GAR1-203	657	-	ENSCATP00000007362	218 (aa)	-	A0A2K5L339
ENSCATT00000025395	GAR1-201	806	-	ENSCATP00000007331	198 (aa)	-	A0A2K5L311
ENSCATT00000025441	GAR1-202	654	XM_012029028	ENSCATP00000007352	217 (aa)	XP_011884418	A0A2K5L330

Gene Model

Click here to download ENSCATG00000021854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000021854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000021854	GAR1	100	99.539	ENSG00000109534	GAR1	100	99.539	Homo_sapiens
ENSCATG00000021854	GAR1	54	94.393	ENSAPOG00000019754	gar1	52	92.727	Acanthochromis_polyacanthus
ENSCATG00000021854	GAR1	55	98.165	ENSAMEG00000004605	GAR1	54	98.182	Ailuropoda_melanoleuca
ENSCATG00000021854	GAR1	54	94.393	ENSAOCG00000020947	gar1	51	92.727	Amphiprion_ocellaris
ENSCATG00000021854	GAR1	54	94.393	ENSAPEG00000001676	gar1	51	92.727	Amphiprion_percula
ENSCATG00000021854	GAR1	54	94.393	ENSATEG00000003733	gar1	51	92.727	Anabas_testudineus
ENSCATG00000021854	GAR1	54	89.623	ENSAPLG00000010926	GAR1	60	88.889	Anas_platyrhynchos
ENSCATG00000021854	GAR1	54	91.509	ENSACAG00000010031	GAR1	51	90.741	Anolis_carolinensis
ENSCATG00000021854	GAR1	100	98.624	ENSANAG00000021608	GAR1	100	98.624	Aotus_nancymaae
ENSCATG00000021854	GAR1	55	99.083	ENSBTAG00000000748	GAR1	52	99.091	Bos_taurus
ENSCATG00000021854	GAR1	100	98.165	ENSCJAG00000004041	GAR1	100	98.165	Callithrix_jacchus
ENSCATG00000021854	GAR1	54	99.057	ENSCAFG00020015566	GAR1	57	99.091	Canis_lupus_dingo
ENSCATG00000021854	GAR1	56	99.091	ENSCHIG00000016026	-	53	99.091	Capra_hircus
ENSCATG00000021854	GAR1	66	81.944	ENSTSYG00000026632	-	56	91.818	Carlito_syrichta
ENSCATG00000021854	GAR1	55	100.000	ENSTSYG00000013668	-	52	100.000	Carlito_syrichta
ENSCATG00000021854	GAR1	56	99.091	ENSCPOG00000004216	GAR1	51	99.091	Cavia_porcellus
ENSCATG00000021854	GAR1	100	98.624	ENSCCAG00000029372	GAR1	100	98.624	Cebus_capucinus
ENSCATG00000021854	GAR1	61	97.521	ENSCLAG00000005335	GAR1	99	94.937	Chinchilla_lanigera
ENSCATG00000021854	GAR1	100	100.000	ENSCSAG00000003922	GAR1	100	100.000	Chlorocebus_sabaeus
ENSCATG00000021854	GAR1	56	99.099	ENSCHOG00000007484	-	51	99.138	Choloepus_hoffmanni
ENSCATG00000021854	GAR1	54	92.453	ENSCPBG00000004310	GAR1	56	90.909	Chrysemys_picta_bellii
ENSCATG00000021854	GAR1	100	99.078	ENSCANG00000039262	GAR1	100	99.078	Colobus_angolensis_palliatus
ENSCATG00000021854	GAR1	55	96.330	ENSCGRG00001003919	Gar1	50	96.364	Cricetulus_griseus_chok1gshd
ENSCATG00000021854	GAR1	54	93.458	ENSCSEG00000003525	gar1	50	91.818	Cynoglossus_semilaevis
ENSCATG00000021854	GAR1	54	94.393	ENSCVAG00000002103	gar1	53	92.727	Cyprinodon_variegatus
ENSCATG00000021854	GAR1	54	91.589	ENSDARG00000076526	gar1	68	77.124	Danio_rerio
ENSCATG00000021854	GAR1	55	99.083	ENSDNOG00000037632	GAR1	56	99.091	Dasypus_novemcinctus
ENSCATG00000021854	GAR1	73	91.667	ENSDORG00000000482	Gar1	51	96.364	Dipodomys_ordii
ENSCATG00000021854	GAR1	87	53.947	FBgn0011824	CG4038	84	56.552	Drosophila_melanogaster
ENSCATG00000021854	GAR1	56	98.182	ENSEASG00005004658	GAR1	51	98.182	Equus_asinus_asinus
ENSCATG00000021854	GAR1	56	99.091	ENSECAG00000013624	GAR1	56	99.091	Equus_caballus
ENSCATG00000021854	GAR1	87	53.333	ENSFCAG00000025841	-	78	53.901	Felis_catus
ENSCATG00000021854	GAR1	55	99.083	ENSFCAG00000040791	-	53	99.091	Felis_catus
ENSCATG00000021854	GAR1	54	93.396	ENSFALG00000006445	GAR1	62	84.559	Ficedula_albicollis
ENSCATG00000021854	GAR1	56	91.892	ENSFHEG00000008068	gar1	51	91.818	Fundulus_heteroclitus
ENSCATG00000021854	GAR1	53	93.269	ENSGAGG00000004393	GAR1	56	90.826	Gopherus_agassizii
ENSCATG00000021854	GAR1	100	99.078	ENSGGOG00000008681	GAR1	100	99.078	Gorilla_gorilla
ENSCATG00000021854	GAR1	56	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSCATG00000021854	GAR1	54	98.131	ENSHGLG00000000493	GAR1	99	97.333	Heterocephalus_glaber_female
ENSCATG00000021854	GAR1	56	90.000	ENSIPUG00000003194	gar1	52	90.000	Ictalurus_punctatus
ENSCATG00000021854	GAR1	55	97.248	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSCATG00000021854	GAR1	56	89.189	ENSKMAG00000010402	gar1	52	90.000	Kryptolebias_marmoratus
ENSCATG00000021854	GAR1	80	84.298	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSCATG00000021854	GAR1	55	84.259	ENSMFAG00000003572	-	54	82.727	Macaca_fascicularis
ENSCATG00000021854	GAR1	100	100.000	ENSMFAG00000024592	GAR1	100	100.000	Macaca_fascicularis
ENSCATG00000021854	GAR1	100	100.000	ENSMMUG00000021225	GAR1	100	100.000	Macaca_mulatta
ENSCATG00000021854	GAR1	100	100.000	ENSMNEG00000042594	GAR1	100	100.000	Macaca_nemestrina
ENSCATG00000021854	GAR1	100	99.541	ENSMLEG00000002496	GAR1	100	99.541	Mandrillus_leucophaeus
ENSCATG00000021854	GAR1	54	91.509	ENSMGAG00000011058	GAR1	56	90.476	Meleagris_gallopavo
ENSCATG00000021854	GAR1	55	96.330	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSCATG00000021854	GAR1	57	98.214	ENSMICG00000003326	GAR1	51	99.091	Microcebus_murinus
ENSCATG00000021854	GAR1	55	95.413	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSCATG00000021854	GAR1	54	95.327	ENSMMOG00000004156	gar1	52	95.327	Mola_mola
ENSCATG00000021854	GAR1	75	74.497	ENSMALG00000009672	gar1	52	92.035	Monopterus_albus
ENSCATG00000021854	GAR1	55	96.330	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSCATG00000021854	GAR1	56	96.364	ENSMUSG00000028010	Gar1	90	86.034	Mus_musculus
ENSCATG00000021854	GAR1	88	92.746	MGP_PahariEiJ_G0027076	Gar1	100	94.681	Mus_pahari
ENSCATG00000021854	GAR1	56	96.364	MGP_SPRETEiJ_G0026580	Gar1	90	86.034	Mus_spretus
ENSCATG00000021854	GAR1	55	99.083	ENSMPUG00000008615	GAR1	53	99.091	Mustela_putorius_furo
ENSCATG00000021854	GAR1	100	93.750	ENSMLUG00000003776	GAR1	100	93.750	Myotis_lucifugus
ENSCATG00000021854	GAR1	56	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSCATG00000021854	GAR1	56	83.784	ENSNLEG00000034282	-	56	83.636	Nomascus_leucogenys
ENSCATG00000021854	GAR1	100	97.696	ENSNLEG00000016578	GAR1	100	97.696	Nomascus_leucogenys
ENSCATG00000021854	GAR1	54	98.131	ENSODEG00000011083	GAR1	57	97.273	Octodon_degus
ENSCATG00000021854	GAR1	54	94.393	ENSONIG00000001085	gar1	50	92.727	Oreochromis_niloticus
ENSCATG00000021854	GAR1	55	99.083	ENSOCUG00000003901	GAR1	51	99.091	Oryctolagus_cuniculus
ENSCATG00000021854	GAR1	54	94.393	ENSORLG00000020583	gar1	50	92.727	Oryzias_latipes
ENSCATG00000021854	GAR1	54	94.393	ENSORLG00020008602	gar1	50	92.727	Oryzias_latipes_hni
ENSCATG00000021854	GAR1	54	94.393	ENSORLG00015017643	gar1	50	92.727	Oryzias_latipes_hsok
ENSCATG00000021854	GAR1	55	99.083	ENSOGAG00000004693	GAR1	52	99.091	Otolemur_garnettii
ENSCATG00000021854	GAR1	55	99.083	ENSOARG00000004910	GAR1	52	99.091	Ovis_aries
ENSCATG00000021854	GAR1	100	99.083	ENSPPAG00000014081	GAR1	100	99.083	Pan_paniscus
ENSCATG00000021854	GAR1	55	99.083	ENSPPRG00000023697	GAR1	53	99.091	Panthera_pardus
ENSCATG00000021854	GAR1	55	99.083	ENSPTIG00000021565	GAR1	53	99.091	Panthera_tigris_altaica
ENSCATG00000021854	GAR1	88	81.651	ENSPTRG00000049340	-	66	73.913	Pan_troglodytes
ENSCATG00000021854	GAR1	100	99.078	ENSPTRG00000016364	GAR1	100	99.078	Pan_troglodytes
ENSCATG00000021854	GAR1	100	99.078	ENSPANG00000000639	GAR1	100	99.078	Papio_anubis
ENSCATG00000021854	GAR1	84	73.653	ENSPKIG00000018991	gar1	66	85.034	Paramormyrops_kingsleyae
ENSCATG00000021854	GAR1	54	92.453	ENSPSIG00000002970	GAR1	50	90.909	Pelodiscus_sinensis
ENSCATG00000021854	GAR1	55	96.330	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSCATG00000021854	GAR1	55	92.593	ENSPCIG00000018912	GAR1	52	87.805	Phascolarctos_cinereus
ENSCATG00000021854	GAR1	54	93.458	ENSPFOG00000024155	gar1	52	91.818	Poecilia_formosa
ENSCATG00000021854	GAR1	54	93.458	ENSPLAG00000015056	gar1	52	91.818	Poecilia_latipinna
ENSCATG00000021854	GAR1	54	94.393	ENSPMEG00000009320	gar1	53	92.727	Poecilia_mexicana
ENSCATG00000021854	GAR1	100	99.078	ENSPPYG00000014996	GAR1	100	99.078	Pongo_abelii
ENSCATG00000021854	GAR1	54	100.000	ENSPCOG00000027049	GAR1	56	100.000	Propithecus_coquereli
ENSCATG00000021854	GAR1	85	95.906	ENSRNOG00000061146	Gar1	100	95.906	Rattus_norvegicus
ENSCATG00000021854	GAR1	57	82.143	ENSRBIG00000042411	-	53	81.818	Rhinopithecus_bieti
ENSCATG00000021854	GAR1	100	99.539	ENSRBIG00000019547	GAR1	100	99.539	Rhinopithecus_bieti
ENSCATG00000021854	GAR1	100	100.000	ENSRROG00000028454	GAR1	100	100.000	Rhinopithecus_roxellana
ENSCATG00000021854	GAR1	57	82.143	ENSRROG00000044348	-	53	81.818	Rhinopithecus_roxellana
ENSCATG00000021854	GAR1	74	49.655	YHR089C	-	89	50.413	Saccharomyces_cerevisiae
ENSCATG00000021854	GAR1	97	96.410	ENSSBOG00000024785	GAR1	90	96.410	Saimiri_boliviensis_boliviensis
ENSCATG00000021854	GAR1	54	91.589	ENSSMAG00000009976	gar1	53	88.793	Scophthalmus_maximus
ENSCATG00000021854	GAR1	54	93.458	ENSSLDG00000023264	gar1	52	91.818	Seriola_lalandi_dorsalis
ENSCATG00000021854	GAR1	54	93.396	ENSSPUG00000008707	GAR1	61	91.818	Sphenodon_punctatus
ENSCATG00000021854	GAR1	54	94.393	ENSSPAG00000005974	gar1	54	91.935	Stegastes_partitus
ENSCATG00000021854	GAR1	56	99.091	ENSSSCG00000009137	GAR1	54	99.091	Sus_scrofa
ENSCATG00000021854	GAR1	50	89.899	ENSTGUG00000004185	GAR1	67	89.899	Taeniopygia_guttata
ENSCATG00000021854	GAR1	54	90.654	ENSTRUG00000020580	gar1	53	89.091	Takifugu_rubripes
ENSCATG00000021854	GAR1	53	93.269	ENSTNIG00000013023	gar1	63	91.818	Tetraodon_nigroviridis
ENSCATG00000021854	GAR1	54	99.057	ENSUAMG00000005652	GAR1	57	99.091	Ursus_americanus
ENSCATG00000021854	GAR1	55	99.083	ENSUMAG00000000776	GAR1	53	99.091	Ursus_maritimus
ENSCATG00000021854	GAR1	55	99.083	ENSVVUG00000017612	GAR1	57	99.091	Vulpes_vulpes