EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000022394 (Gene tree)
Gene ID: 105573434
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 19494 bases
Position: chrKQ011984.1:117370-136863
Accession: 105573434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000007654	tRNA-synt_1g	PF09334.11	2.7e-10	1	1
ENSCATP00000007654	Anticodon_1	PF08264.13	1.6e-32	1	1
ENSCATP00000007694	Anticodon_1	PF08264.13	3.5e-28	1	1
ENSCATP00000007654	tRNA-synt_1	PF00133.22	1.2e-200	1	1
ENSCATP00000007694	tRNA-synt_1	PF00133.22	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000026280	VARS-201	4314	XM_012032946	ENSCATP00000007654	1264 (aa)	XP_011888336	A0A2K5L3Z8
ENSCATT00000026379	VARS-202	1191	-	ENSCATP00000007694	396 (aa)	-	A0A2K5L440

Gene Model

Click here to download ENSCATG00000022394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000022394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000022394	VARS	100	41.849	ENSCATG00000032554	VARS2	91	51.610

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000022394	VARS	100	98.576	ENSG00000204394	VARS	100	98.851	Homo_sapiens
ENSCATG00000022394	VARS	98	64.956	ENSAPOG00000020691	vars	99	64.635	Acanthochromis_polyacanthus
ENSCATG00000022394	VARS	98	64.956	ENSAPOG00000020921	vars	99	64.635	Acanthochromis_polyacanthus
ENSCATG00000022394	VARS	100	95.020	ENSAMEG00000006417	VARS	100	95.020	Ailuropoda_melanoleuca
ENSCATG00000022394	VARS	100	65.882	ENSACIG00000013752	vars	100	65.569	Amphilophus_citrinellus
ENSCATG00000022394	VARS	100	64.779	ENSAOCG00000002447	vars	100	64.437	Amphiprion_ocellaris
ENSCATG00000022394	VARS	100	64.779	ENSAPEG00000010638	vars	99	64.953	Amphiprion_percula
ENSCATG00000022394	VARS	100	64.803	ENSATEG00000020219	vars	100	64.409	Anabas_testudineus
ENSCATG00000022394	VARS	89	61.096	ENSACAG00000017289	-	100	62.778	Anolis_carolinensis
ENSCATG00000022394	VARS	90	70.598	ENSACAG00000029133	-	99	71.032	Anolis_carolinensis
ENSCATG00000022394	VARS	100	97.231	ENSANAG00000015453	VARS	100	97.231	Aotus_nancymaae
ENSCATG00000022394	VARS	100	65.116	ENSACLG00000025699	vars	97	64.806	Astatotilapia_calliptera
ENSCATG00000022394	VARS	94	66.305	ENSAMXG00000017716	vars	95	66.305	Astyanax_mexicanus
ENSCATG00000022394	VARS	100	94.858	ENSBTAG00000005631	VARS	100	94.858	Bos_taurus
ENSCATG00000022394	VARS	100	97.231	ENSCJAG00000002604	VARS	100	97.231	Callithrix_jacchus
ENSCATG00000022394	VARS	100	94.462	ENSCAFG00000000636	VARS	100	94.462	Canis_familiaris
ENSCATG00000022394	VARS	94	94.426	ENSCAFG00020020790	VARS	96	94.426	Canis_lupus_dingo
ENSCATG00000022394	VARS	100	95.016	ENSCHIG00000011008	VARS	100	95.016	Capra_hircus
ENSCATG00000022394	VARS	100	95.886	ENSTSYG00000001567	VARS	100	95.886	Carlito_syrichta
ENSCATG00000022394	VARS	100	88.698	ENSCAPG00000013736	VARS	99	90.571	Cavia_aperea
ENSCATG00000022394	VARS	100	91.693	ENSCPOG00000000870	VARS	100	91.693	Cavia_porcellus
ENSCATG00000022394	VARS	100	97.389	ENSCCAG00000035656	VARS	100	97.389	Cebus_capucinus
ENSCATG00000022394	VARS	95	83.333	ENSCLAG00000009470	VARS	92	89.764	Chinchilla_lanigera
ENSCATG00000022394	VARS	100	99.367	ENSCSAG00000008784	VARS	100	99.367	Chlorocebus_sabaeus
ENSCATG00000022394	VARS	100	60.688	ENSCPBG00000007943	VARS	96	74.538	Chrysemys_picta_bellii
ENSCATG00000022394	VARS	100	99.051	ENSCANG00000033570	VARS	100	99.051	Colobus_angolensis_palliatus
ENSCATG00000022394	VARS	100	92.801	ENSCGRG00001005686	Vars	100	92.801	Cricetulus_griseus_chok1gshd
ENSCATG00000022394	VARS	100	90.172	ENSCGRG00000013352	Vars	78	87.688	Cricetulus_griseus_crigri
ENSCATG00000022394	VARS	100	64.664	ENSCSEG00000019652	vars	100	64.743	Cynoglossus_semilaevis
ENSCATG00000022394	VARS	100	65.346	ENSCVAG00000022398	vars	100	65.194	Cyprinodon_variegatus
ENSCATG00000022394	VARS	100	65.089	ENSDARG00000044575	vars	100	65.241	Danio_rerio
ENSCATG00000022394	VARS	72	86.913	ENSDNOG00000038678	-	100	91.468	Dasypus_novemcinctus
ENSCATG00000022394	VARS	100	90.663	ENSDORG00000016433	Vars	95	92.850	Dipodomys_ordii
ENSCATG00000022394	VARS	67	92.035	ENSETEG00000003824	VARS	76	86.257	Echinops_telfairi
ENSCATG00000022394	VARS	75	64.706	ENSEBUG00000007086	vars	72	69.983	Eptatretus_burgeri
ENSCATG00000022394	VARS	100	52.068	ENSEBUG00000004637	vars	100	62.225	Eptatretus_burgeri
ENSCATG00000022394	VARS	100	95.491	ENSEASG00005015673	VARS	100	95.491	Equus_asinus_asinus
ENSCATG00000022394	VARS	100	94.466	ENSECAG00000014620	VARS	100	94.941	Equus_caballus
ENSCATG00000022394	VARS	83	92.388	ENSEEUG00000004116	VARS	83	92.388	Erinaceus_europaeus
ENSCATG00000022394	VARS	100	64.379	ENSELUG00000006550	vars	97	64.181	Esox_lucius
ENSCATG00000022394	VARS	100	94.699	ENSFCAG00000004510	VARS	100	94.699	Felis_catus
ENSCATG00000022394	VARS	82	91.649	ENSFDAG00000011401	VARS	100	91.649	Fukomys_damarensis
ENSCATG00000022394	VARS	100	65.423	ENSFHEG00000010672	vars	100	65.271	Fundulus_heteroclitus
ENSCATG00000022394	VARS	100	59.322	ENSGMOG00000014908	vars	97	66.306	Gadus_morhua
ENSCATG00000022394	VARS	100	65.681	ENSGAFG00000021630	vars	100	65.657	Gambusia_affinis
ENSCATG00000022394	VARS	92	66.500	ENSGACG00000009601	vars	98	66.333	Gasterosteus_aculeatus
ENSCATG00000022394	VARS	100	56.061	ENSGAGG00000006067	-	96	77.576	Gopherus_agassizii
ENSCATG00000022394	VARS	50	64.826	ENSGAGG00000006508	-	91	64.196	Gopherus_agassizii
ENSCATG00000022394	VARS	100	98.655	ENSGGOG00000011364	VARS	100	98.655	Gorilla_gorilla
ENSCATG00000022394	VARS	100	65.039	ENSHBUG00000017151	vars	97	64.729	Haplochromis_burtoni
ENSCATG00000022394	VARS	100	90.744	ENSHGLG00000011646	VARS	100	90.427	Heterocephalus_glaber_female
ENSCATG00000022394	VARS	100	82.176	ENSHGLG00100018062	VARS	100	83.056	Heterocephalus_glaber_male
ENSCATG00000022394	VARS	99	64.601	ENSHCOG00000012198	vars	99	64.852	Hippocampus_comes
ENSCATG00000022394	VARS	100	65.525	ENSIPUG00000005218	vars	100	65.525	Ictalurus_punctatus
ENSCATG00000022394	VARS	100	94.387	ENSSTOG00000013112	VARS	100	94.387	Ictidomys_tridecemlineatus
ENSCATG00000022394	VARS	100	74.201	ENSJJAG00000015343	-	100	72.468	Jaculus_jaculus
ENSCATG00000022394	VARS	100	91.218	ENSJJAG00000019749	-	100	91.218	Jaculus_jaculus
ENSCATG00000022394	VARS	100	65.166	ENSKMAG00000009455	vars	100	65.008	Kryptolebias_marmoratus
ENSCATG00000022394	VARS	100	63.874	ENSLBEG00000010341	vars	100	64.511	Labrus_bergylta
ENSCATG00000022394	VARS	94	62.366	ENSLACG00000015232	VARS	99	62.787	Latimeria_chalumnae
ENSCATG00000022394	VARS	100	67.109	ENSLOCG00000004240	vars	100	67.109	Lepisosteus_oculatus
ENSCATG00000022394	VARS	100	93.354	ENSLAFG00000023090	VARS	100	93.829	Loxodonta_africana
ENSCATG00000022394	VARS	100	99.446	ENSMFAG00000001032	VARS	100	99.446	Macaca_fascicularis
ENSCATG00000022394	VARS	100	99.446	ENSMMUG00000006828	VARS	100	99.446	Macaca_mulatta
ENSCATG00000022394	VARS	100	99.446	ENSMNEG00000042072	VARS	100	99.446	Macaca_nemestrina
ENSCATG00000022394	VARS	100	99.684	ENSMLEG00000039307	VARS	100	99.684	Mandrillus_leucophaeus
ENSCATG00000022394	VARS	100	64.724	ENSMAMG00000003949	vars	100	65.055	Mastacembelus_armatus
ENSCATG00000022394	VARS	100	65.116	ENSMZEG00005018327	vars	100	64.641	Maylandia_zebra
ENSCATG00000022394	VARS	100	92.326	ENSMAUG00000006715	Vars	100	92.326	Mesocricetus_auratus
ENSCATG00000022394	VARS	100	94.699	ENSMICG00000003548	VARS	100	95.274	Microcebus_murinus
ENSCATG00000022394	VARS	100	90.663	ENSMOCG00000015404	Vars	100	90.190	Microtus_ochrogaster
ENSCATG00000022394	VARS	100	64.443	ENSMMOG00000015801	vars	100	64.443	Mola_mola
ENSCATG00000022394	VARS	84	59.078	ENSMODG00000001325	-	98	62.281	Monodelphis_domestica
ENSCATG00000022394	VARS	100	86.788	ENSMODG00000015204	-	100	86.788	Monodelphis_domestica
ENSCATG00000022394	VARS	99	65.012	ENSMALG00000022532	vars	99	64.544	Monopterus_albus
ENSCATG00000022394	VARS	100	93.117	MGP_CAROLIEiJ_G0021491	Vars	100	93.513	Mus_caroli
ENSCATG00000022394	VARS	100	93.117	ENSMUSG00000007029	Vars	100	93.513	Mus_musculus
ENSCATG00000022394	VARS	100	92.484	MGP_PahariEiJ_G0020486	Vars	100	92.880	Mus_pahari
ENSCATG00000022394	VARS	100	93.196	MGP_SPRETEiJ_G0022396	Vars	100	93.592	Mus_spretus
ENSCATG00000022394	VARS	100	94.937	ENSMPUG00000010821	VARS	100	94.937	Mustela_putorius_furo
ENSCATG00000022394	VARS	78	93.522	ENSMLUG00000013126	VARS	100	93.522	Myotis_lucifugus
ENSCATG00000022394	VARS	100	91.930	ENSNGAG00000012151	Vars	100	91.930	Nannospalax_galili
ENSCATG00000022394	VARS	100	64.806	ENSNBRG00000020520	vars	100	64.496	Neolamprologus_brichardi
ENSCATG00000022394	VARS	100	97.785	ENSNLEG00000006351	VARS	100	97.785	Nomascus_leucogenys
ENSCATG00000022394	VARS	100	83.228	ENSMEUG00000011378	VARS	100	83.228	Notamacropus_eugenii
ENSCATG00000022394	VARS	100	93.750	ENSOPRG00000003607	VARS	100	93.750	Ochotona_princeps
ENSCATG00000022394	VARS	100	91.456	ENSODEG00000017681	VARS	100	91.456	Octodon_degus
ENSCATG00000022394	VARS	100	65.676	ENSONIG00000013064	vars	99	67.997	Oreochromis_niloticus
ENSCATG00000022394	VARS	77	78.504	ENSOANG00000005400	VARS	98	78.029	Ornithorhynchus_anatinus
ENSCATG00000022394	VARS	100	92.168	ENSOCUG00000022463	VARS	100	91.956	Oryctolagus_cuniculus
ENSCATG00000022394	VARS	100	64.526	ENSORLG00000013063	vars	100	64.674	Oryzias_latipes
ENSCATG00000022394	VARS	100	65.227	ENSORLG00020003504	vars	100	65.204	Oryzias_latipes_hni
ENSCATG00000022394	VARS	100	65.123	ENSORLG00015009001	vars	100	65.100	Oryzias_latipes_hsok
ENSCATG00000022394	VARS	100	64.969	ENSOMEG00000015016	vars	100	64.946	Oryzias_melastigma
ENSCATG00000022394	VARS	100	94.858	ENSOGAG00000007515	VARS	100	94.858	Otolemur_garnettii
ENSCATG00000022394	VARS	100	98.813	ENSPPAG00000034012	VARS	100	98.813	Pan_paniscus
ENSCATG00000022394	VARS	100	94.858	ENSPPRG00000014855	VARS	100	94.858	Panthera_pardus
ENSCATG00000022394	VARS	85	94.888	ENSPTIG00000010462	VARS	95	94.872	Panthera_tigris_altaica
ENSCATG00000022394	VARS	100	98.734	ENSPTRG00000017985	VARS	100	98.734	Pan_troglodytes
ENSCATG00000022394	VARS	100	97.792	ENSPANG00000014565	VARS	100	97.792	Papio_anubis
ENSCATG00000022394	VARS	100	64.015	ENSPKIG00000016304	vars	100	64.170	Paramormyrops_kingsleyae
ENSCATG00000022394	VARS	100	65.642	ENSPMGG00000023909	vars	100	65.721	Periophthalmus_magnuspinnatus
ENSCATG00000022394	VARS	100	93.592	ENSPEMG00000006639	Vars	100	93.592	Peromyscus_maniculatus_bairdii
ENSCATG00000022394	VARS	100	86.313	ENSPCIG00000018553	VARS	100	86.313	Phascolarctos_cinereus
ENSCATG00000022394	VARS	100	65.837	ENSPFOG00000015690	vars	100	65.812	Poecilia_formosa
ENSCATG00000022394	VARS	100	66.326	ENSPLAG00000009590	vars	100	66.326	Poecilia_latipinna
ENSCATG00000022394	VARS	100	65.837	ENSPMEG00000004708	vars	100	65.812	Poecilia_mexicana
ENSCATG00000022394	VARS	100	64.280	ENSPREG00000013264	vars	100	63.715	Poecilia_reticulata
ENSCATG00000022394	VARS	100	96.915	ENSPPYG00000016460	VARS	100	96.915	Pongo_abelii
ENSCATG00000022394	VARS	100	89.189	ENSPCAG00000013565	VARS	86	92.280	Procavia_capensis
ENSCATG00000022394	VARS	100	95.099	ENSPCOG00000010942	VARS	100	95.573	Propithecus_coquereli
ENSCATG00000022394	VARS	100	91.218	ENSPVAG00000012403	VARS	100	91.218	Pteropus_vampyrus
ENSCATG00000022394	VARS	100	65.039	ENSPNYG00000022511	vars	100	64.729	Pundamilia_nyererei
ENSCATG00000022394	VARS	100	64.934	ENSPNAG00000020962	vars	100	64.701	Pygocentrus_nattereri
ENSCATG00000022394	VARS	100	93.275	ENSRNOG00000000867	Vars	100	93.275	Rattus_norvegicus
ENSCATG00000022394	VARS	100	99.495	ENSRBIG00000041669	VARS	100	99.495	Rhinopithecus_bieti
ENSCATG00000022394	VARS	100	99.446	ENSRROG00000045490	VARS	100	99.446	Rhinopithecus_roxellana
ENSCATG00000022394	VARS	100	96.915	ENSSBOG00000035402	VARS	100	96.915	Saimiri_boliviensis_boliviensis
ENSCATG00000022394	VARS	100	81.775	ENSSHAG00000006937	VARS	100	82.011	Sarcophilus_harrisii
ENSCATG00000022394	VARS	100	64.710	ENSSFOG00015014272	vars	100	64.788	Scleropages_formosus
ENSCATG00000022394	VARS	100	63.854	ENSSMAG00000009596	vars	99	63.594	Scophthalmus_maximus
ENSCATG00000022394	VARS	100	64.628	ENSSDUG00000014177	vars	100	64.474	Seriola_dumerili
ENSCATG00000022394	VARS	100	64.628	ENSSLDG00000025316	vars	100	64.319	Seriola_lalandi_dorsalis
ENSCATG00000022394	VARS	100	65.166	ENSSPAG00000017068	vars	100	65.265	Stegastes_partitus
ENSCATG00000022394	VARS	100	93.043	ENSSSCG00000038950	VARS	100	93.518	Sus_scrofa
ENSCATG00000022394	VARS	81	65.146	ENSTRUG00000012307	vars	96	65.087	Takifugu_rubripes
ENSCATG00000022394	VARS	84	52.819	ENSTRUG00000002238	-	99	53.116	Takifugu_rubripes
ENSCATG00000022394	VARS	100	65.415	ENSTNIG00000008011	vars	100	65.412	Tetraodon_nigroviridis
ENSCATG00000022394	VARS	54	94.757	ENSTBEG00000004728	-	60	94.757	Tupaia_belangeri
ENSCATG00000022394	VARS	100	91.400	ENSTTRG00000014128	VARS	100	86.076	Tursiops_truncatus
ENSCATG00000022394	VARS	100	91.274	ENSUAMG00000010424	VARS	100	91.274	Ursus_americanus
ENSCATG00000022394	VARS	93	94.762	ENSUMAG00000013486	VARS	98	94.921	Ursus_maritimus
ENSCATG00000022394	VARS	100	94.150	ENSVVUG00000021323	VARS	100	94.229	Vulpes_vulpes
ENSCATG00000022394	VARS	96	63.137	ENSXETG00000024076	vars	98	62.945	Xenopus_tropicalis
ENSCATG00000022394	VARS	100	65.748	ENSXCOG00000019172	vars	100	65.881	Xiphophorus_couchianus
ENSCATG00000022394	VARS	100	65.603	ENSXMAG00000010927	vars	100	65.579	Xiphophorus_maculatus