EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000023642 (Gene tree)
Gene ID: 105590349
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 200406 bases
Position: chrKQ009971.1:5523622-5724027
Accession: 105590349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000008522	R3H	PF01424.22	2.7e-11	1	1
ENSCATP00000008546	R3H	PF01424.22	3.1e-11	1	1
ENSCATP00000008510	R3H	PF01424.22	3.2e-11	1	1
ENSCATP00000008561	R3H	PF01424.22	3.2e-11	1	1
ENSCATP00000008492	R3H	PF01424.22	3.3e-11	1	1
ENSCATP00000008468	R3H	PF01424.22	3.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000029807	R3HDM1-205	3135	-	ENSCATP00000008546	1044 (aa)	-	A0A2K5L6K0
ENSCATT00000029618	R3HDM1-202	8061	XM_012069828	ENSCATP00000008492	1134 (aa)	XP_011925218	A0A2K5L6C2
ENSCATT00000029873	R3HDM1-206	3303	-	ENSCATP00000008561	1100 (aa)	-	A0A2K5L6L3
ENSCATT00000029683	R3HDM1-203	6729	XM_012069834	ENSCATP00000008510	1100 (aa)	XP_011925224	A0A2K5L6C4
ENSCATT00000029712	R3HDM1-204	6340	XM_012069847	ENSCATP00000008522	971 (aa)	XP_011925237	A0A2K5L6F1
ENSCATT00000029549	R3HDM1-201	8159	XM_012069822	ENSCATP00000008468	1165 (aa)	XP_011925212	A0A2K5L694

Gene Model

Click here to download ENSCATG00000023642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000023642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000023642	R3HDM1	99	49.554	ENSCATG00000036929	R3HDM2	96	57.421
ENSCATG00000023642	R3HDM1	69	51.146	ENSCATG00000032088	ARPP21	95	50.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000023642	R3HDM1	100	98.909	ENSG00000048991	R3HDM1	100	99.262	Homo_sapiens
ENSCATG00000023642	R3HDM1	88	63.200	ENSAPOG00000020850	r3hdm1	90	59.465	Acanthochromis_polyacanthus
ENSCATG00000023642	R3HDM1	100	94.742	ENSAMEG00000014886	R3HDM1	100	97.670	Ailuropoda_melanoleuca
ENSCATG00000023642	R3HDM1	87	58.088	ENSAOCG00000005192	r3hdm1	93	59.465	Amphiprion_ocellaris
ENSCATG00000023642	R3HDM1	87	62.933	ENSAPEG00000016108	r3hdm1	95	62.933	Amphiprion_percula
ENSCATG00000023642	R3HDM1	87	63.172	ENSATEG00000000232	r3hdm1	87	63.768	Anabas_testudineus
ENSCATG00000023642	R3HDM1	100	78.771	ENSAPLG00000015231	R3HDM1	99	84.466	Anas_platyrhynchos
ENSCATG00000023642	R3HDM1	100	78.478	ENSACAG00000001676	R3HDM1	100	79.003	Anolis_carolinensis
ENSCATG00000023642	R3HDM1	100	98.183	ENSANAG00000035334	R3HDM1	100	98.524	Aotus_nancymaae
ENSCATG00000023642	R3HDM1	87	62.400	ENSACLG00000027282	r3hdm1	94	62.400	Astatotilapia_calliptera
ENSCATG00000023642	R3HDM1	89	77.950	ENSAMXG00000012861	R3HDM1	100	71.394	Astyanax_mexicanus
ENSCATG00000023642	R3HDM1	61	39.858	ENSAMXG00000020587	arpp21	84	59.514	Astyanax_mexicanus
ENSCATG00000023642	R3HDM1	88	75.000	ENSAMXG00000003536	r3hdm1	89	74.921	Astyanax_mexicanus
ENSCATG00000023642	R3HDM1	100	93.404	ENSBTAG00000013302	R3HDM1	100	94.019	Bos_taurus
ENSCATG00000023642	R3HDM1	100	97.727	ENSCJAG00000011718	R3HDM1	100	98.339	Callithrix_jacchus
ENSCATG00000023642	R3HDM1	100	94.923	ENSCAFG00000005075	R3HDM1	99	97.476	Canis_familiaris
ENSCATG00000023642	R3HDM1	100	94.987	ENSCAFG00020016119	R3HDM1	99	97.476	Canis_lupus_dingo
ENSCATG00000023642	R3HDM1	100	93.580	ENSCHIG00000020851	R3HDM1	100	95.028	Capra_hircus
ENSCATG00000023642	R3HDM1	100	92.274	ENSCPOG00000012784	R3HDM1	100	92.362	Cavia_porcellus
ENSCATG00000023642	R3HDM1	100	97.636	ENSCCAG00000027199	R3HDM1	100	97.970	Cebus_capucinus
ENSCATG00000023642	R3HDM1	100	90.869	ENSCLAG00000007962	R3HDM1	100	90.781	Chinchilla_lanigera
ENSCATG00000023642	R3HDM1	100	99.383	ENSCSAG00000016356	R3HDM1	100	99.383	Chlorocebus_sabaeus
ENSCATG00000023642	R3HDM1	80	93.939	ENSCHOG00000013638	R3HDM1	81	94.118	Choloepus_hoffmanni
ENSCATG00000023642	R3HDM1	91	91.111	ENSCPBG00000009645	R3HDM1	99	91.111	Chrysemys_picta_bellii
ENSCATG00000023642	R3HDM1	100	98.910	ENSCANG00000034748	R3HDM1	100	98.910	Colobus_angolensis_palliatus
ENSCATG00000023642	R3HDM1	99	90.917	ENSCGRG00001012357	R3hdm1	97	91.005	Cricetulus_griseus_chok1gshd
ENSCATG00000023642	R3HDM1	100	90.861	ENSCGRG00000012080	R3hdm1	100	90.949	Cricetulus_griseus_crigri
ENSCATG00000023642	R3HDM1	81	65.909	ENSCSEG00000008944	r3hdm1	96	54.494	Cynoglossus_semilaevis
ENSCATG00000023642	R3HDM1	87	60.800	ENSCVAG00000007582	r3hdm1	97	55.849	Cyprinodon_variegatus
ENSCATG00000023642	R3HDM1	64	35.553	ENSDARG00000061081	arpp21	95	34.650	Danio_rerio
ENSCATG00000023642	R3HDM1	100	91.205	ENSDNOG00000000771	R3HDM1	100	90.631	Dasypus_novemcinctus
ENSCATG00000023642	R3HDM1	100	83.228	ENSETEG00000013606	R3HDM1	98	92.683	Echinops_telfairi
ENSCATG00000023642	R3HDM1	66	41.667	ENSEBUG00000014746	arpp21	97	42.489	Eptatretus_burgeri
ENSCATG00000023642	R3HDM1	100	97.514	ENSEASG00005007392	R3HDM1	100	97.476	Equus_asinus_asinus
ENSCATG00000023642	R3HDM1	99	97.514	ENSECAG00000019114	R3HDM1	100	97.476	Equus_caballus
ENSCATG00000023642	R3HDM1	91	86.691	ENSEEUG00000012589	R3HDM1	91	86.691	Erinaceus_europaeus
ENSCATG00000023642	R3HDM1	92	53.200	ENSELUG00000014413	r3hdm1	96	53.773	Esox_lucius
ENSCATG00000023642	R3HDM1	83	77.023	ENSELUG00000004909	R3HDM1	97	67.562	Esox_lucius
ENSCATG00000023642	R3HDM1	100	97.238	ENSFCAG00000027113	R3HDM1	100	97.044	Felis_catus
ENSCATG00000023642	R3HDM1	75	75.669	ENSFALG00000013731	R3HDM1	93	69.210	Ficedula_albicollis
ENSCATG00000023642	R3HDM1	100	91.308	ENSFDAG00000016478	R3HDM1	100	91.396	Fukomys_damarensis
ENSCATG00000023642	R3HDM1	87	56.863	ENSFHEG00000018713	r3hdm1	97	57.443	Fundulus_heteroclitus
ENSCATG00000023642	R3HDM1	59	69.130	ENSGMOG00000006042	-	74	69.783	Gadus_morhua
ENSCATG00000023642	R3HDM1	88	85.294	ENSGALG00000012246	R3HDM1	99	85.246	Gallus_gallus
ENSCATG00000023642	R3HDM1	87	61.067	ENSGAFG00000006203	r3hdm1	95	61.067	Gambusia_affinis
ENSCATG00000023642	R3HDM1	86	67.949	ENSGACG00000014925	r3hdm1	92	67.949	Gasterosteus_aculeatus
ENSCATG00000023642	R3HDM1	99	83.099	ENSGAGG00000007840	R3HDM1	99	83.883	Gopherus_agassizii
ENSCATG00000023642	R3HDM1	100	98.727	ENSGGOG00000008156	R3HDM1	100	99.262	Gorilla_gorilla
ENSCATG00000023642	R3HDM1	100	91.645	ENSHGLG00000015718	R3HDM1	100	91.821	Heterocephalus_glaber_female
ENSCATG00000023642	R3HDM1	100	91.381	ENSHGLG00100003184	-	100	91.557	Heterocephalus_glaber_male
ENSCATG00000023642	R3HDM1	100	68.903	ENSHGLG00100015374	-	100	78.987	Heterocephalus_glaber_male
ENSCATG00000023642	R3HDM1	87	59.249	ENSHCOG00000013366	r3hdm1	91	60.054	Hippocampus_comes
ENSCATG00000023642	R3HDM1	82	73.041	ENSIPUG00000001676	R3HDM1	99	65.072	Ictalurus_punctatus
ENSCATG00000023642	R3HDM1	89	68.923	ENSIPUG00000013629	r3hdm1	95	69.811	Ictalurus_punctatus
ENSCATG00000023642	R3HDM1	100	95.186	ENSSTOG00000007572	R3HDM1	100	96.893	Ictidomys_tridecemlineatus
ENSCATG00000023642	R3HDM1	94	85.161	ENSLACG00000005334	R3HDM1	100	73.206	Latimeria_chalumnae
ENSCATG00000023642	R3HDM1	100	68.523	ENSLOCG00000001641	r3hdm1	99	75.143	Lepisosteus_oculatus
ENSCATG00000023642	R3HDM1	100	93.580	ENSLAFG00000009065	R3HDM1	99	97.151	Loxodonta_africana
ENSCATG00000023642	R3HDM1	100	99.636	ENSMFAG00000030331	R3HDM1	100	99.636	Macaca_fascicularis
ENSCATG00000023642	R3HDM1	100	99.521	ENSMMUG00000009844	R3HDM1	100	99.521	Macaca_mulatta
ENSCATG00000023642	R3HDM1	100	99.455	ENSMNEG00000027793	R3HDM1	100	99.507	Macaca_nemestrina
ENSCATG00000023642	R3HDM1	100	99.727	ENSMLEG00000043189	R3HDM1	100	99.727	Mandrillus_leucophaeus
ENSCATG00000023642	R3HDM1	87	62.466	ENSMAMG00000004532	r3hdm1	93	59.004	Mastacembelus_armatus
ENSCATG00000023642	R3HDM1	87	62.400	ENSMZEG00005003157	r3hdm1	97	58.397	Maylandia_zebra
ENSCATG00000023642	R3HDM1	100	78.320	ENSMGAG00000012461	R3HDM1	100	83.495	Meleagris_gallopavo
ENSCATG00000023642	R3HDM1	100	90.184	ENSMAUG00000010315	R3hdm1	100	90.698	Mesocricetus_auratus
ENSCATG00000023642	R3HDM1	100	94.027	ENSMICG00000005900	-	100	95.580	Microcebus_murinus
ENSCATG00000023642	R3HDM1	95	92.316	ENSMICG00000042655	-	100	92.316	Microcebus_murinus
ENSCATG00000023642	R3HDM1	90	80.228	ENSMODG00000000923	R3HDM1	97	80.418	Monodelphis_domestica
ENSCATG00000023642	R3HDM1	99	58.065	ENSMALG00000009000	r3hdm1	91	58.065	Monopterus_albus
ENSCATG00000023642	R3HDM1	100	89.798	MGP_CAROLIEiJ_G0014543	R3hdm1	100	93.724	Mus_caroli
ENSCATG00000023642	R3HDM1	100	89.798	ENSMUSG00000056211	R3hdm1	100	93.724	Mus_musculus
ENSCATG00000023642	R3HDM1	100	89.710	MGP_PahariEiJ_G0027779	R3hdm1	100	93.724	Mus_pahari
ENSCATG00000023642	R3HDM1	100	89.974	MGP_SPRETEiJ_G0015350	R3hdm1	100	93.724	Mus_spretus
ENSCATG00000023642	R3HDM1	100	94.470	ENSMPUG00000002412	R3HDM1	100	94.651	Mustela_putorius_furo
ENSCATG00000023642	R3HDM1	100	92.676	ENSMLUG00000013824	R3HDM1	100	92.676	Myotis_lucifugus
ENSCATG00000023642	R3HDM1	100	98.818	ENSNLEG00000008622	R3HDM1	100	99.077	Nomascus_leucogenys
ENSCATG00000023642	R3HDM1	89	72.431	ENSMEUG00000011784	R3HDM1	100	72.635	Notamacropus_eugenii
ENSCATG00000023642	R3HDM1	100	91.029	ENSODEG00000008607	R3HDM1	100	90.853	Octodon_degus
ENSCATG00000023642	R3HDM1	94	67.183	ENSONIG00000012017	r3hdm1	91	67.183	Oreochromis_niloticus
ENSCATG00000023642	R3HDM1	100	81.335	ENSOANG00000007987	R3HDM1	98	88.178	Ornithorhynchus_anatinus
ENSCATG00000023642	R3HDM1	89	92.988	ENSOCUG00000017366	R3HDM1	98	96.311	Oryctolagus_cuniculus
ENSCATG00000023642	R3HDM1	87	60.372	ENSORLG00000004297	r3hdm1	92	62.319	Oryzias_latipes
ENSCATG00000023642	R3HDM1	89	60.800	ENSORLG00015017355	r3hdm1	98	57.361	Oryzias_latipes_hsok
ENSCATG00000023642	R3HDM1	100	93.200	ENSOGAG00000003136	R3HDM1	100	95.948	Otolemur_garnettii
ENSCATG00000023642	R3HDM1	100	93.382	ENSOARG00000010788	R3HDM1	100	95.028	Ovis_aries
ENSCATG00000023642	R3HDM1	100	98.730	ENSPPAG00000027858	R3HDM1	100	99.262	Pan_paniscus
ENSCATG00000023642	R3HDM1	100	94.148	ENSPPRG00000002626	R3HDM1	100	94.288	Panthera_pardus
ENSCATG00000023642	R3HDM1	100	94.148	ENSPTIG00000016581	R3HDM1	100	94.288	Panthera_tigris_altaica
ENSCATG00000023642	R3HDM1	100	98.639	ENSPTRG00000012494	R3HDM1	100	99.262	Pan_troglodytes
ENSCATG00000023642	R3HDM1	100	99.727	ENSPANG00000026448	R3HDM1	100	99.727	Papio_anubis
ENSCATG00000023642	R3HDM1	88	76.115	ENSPKIG00000004328	r3hdm1	91	76.358	Paramormyrops_kingsleyae
ENSCATG00000023642	R3HDM1	100	78.391	ENSPSIG00000012915	R3HDM1	98	85.049	Pelodiscus_sinensis
ENSCATG00000023642	R3HDM1	100	91.029	ENSPEMG00000015187	R3hdm1	100	91.029	Peromyscus_maniculatus_bairdii
ENSCATG00000023642	R3HDM1	91	52.696	ENSPMAG00000003369	-	93	56.494	Petromyzon_marinus
ENSCATG00000023642	R3HDM1	100	90.110	ENSPCIG00000002491	R3HDM1	100	89.706	Phascolarctos_cinereus
ENSCATG00000023642	R3HDM1	87	55.474	ENSPFOG00000015036	r3hdm1	94	55.474	Poecilia_formosa
ENSCATG00000023642	R3HDM1	87	59.947	ENSPLAG00000018042	r3hdm1	91	59.947	Poecilia_latipinna
ENSCATG00000023642	R3HDM1	87	59.947	ENSPMEG00000023947	r3hdm1	94	62.619	Poecilia_mexicana
ENSCATG00000023642	R3HDM1	81	68.285	ENSPREG00000007902	r3hdm1	95	61.290	Poecilia_reticulata
ENSCATG00000023642	R3HDM1	100	97.709	ENSPPYG00000012815	R3HDM1	100	97.548	Pongo_abelii
ENSCATG00000023642	R3HDM1	100	81.868	ENSPCAG00000006208	R3HDM1	100	81.233	Procavia_capensis
ENSCATG00000023642	R3HDM1	100	93.974	ENSPCOG00000012698	R3HDM1	100	93.974	Propithecus_coquereli
ENSCATG00000023642	R3HDM1	95	91.328	ENSPVAG00000006098	R3HDM1	100	91.328	Pteropus_vampyrus
ENSCATG00000023642	R3HDM1	94	74.841	ENSPNAG00000013952	r3hdm1	95	70.811	Pygocentrus_nattereri
ENSCATG00000023642	R3HDM1	55	58.400	ENSPNAG00000004162	arpp21	79	58.400	Pygocentrus_nattereri
ENSCATG00000023642	R3HDM1	88	75.962	ENSPNAG00000005436	R3HDM1	99	75.884	Pygocentrus_nattereri
ENSCATG00000023642	R3HDM1	100	89.358	ENSRNOG00000004099	R3hdm1	100	89.358	Rattus_norvegicus
ENSCATG00000023642	R3HDM1	100	98.695	ENSRBIG00000033317	R3HDM1	99	99.630	Rhinopithecus_bieti
ENSCATG00000023642	R3HDM1	100	99.001	ENSRROG00000034534	R3HDM1	100	99.001	Rhinopithecus_roxellana
ENSCATG00000023642	R3HDM1	100	97.545	ENSSBOG00000020389	R3HDM1	100	97.970	Saimiri_boliviensis_boliviensis
ENSCATG00000023642	R3HDM1	100	83.891	ENSSHAG00000016999	R3HDM1	100	84.072	Sarcophilus_harrisii
ENSCATG00000023642	R3HDM1	100	56.483	ENSSFOG00015019851	-	99	64.093	Scleropages_formosus
ENSCATG00000023642	R3HDM1	89	77.882	ENSSFOG00015014134	r3hdm1	100	70.388	Scleropages_formosus
ENSCATG00000023642	R3HDM1	99	60.541	ENSSMAG00000001669	r3hdm1	99	44.435	Scophthalmus_maximus
ENSCATG00000023642	R3HDM1	87	62.766	ENSSDUG00000010749	r3hdm1	97	58.969	Seriola_dumerili
ENSCATG00000023642	R3HDM1	92	69.231	ENSSLDG00000004499	r3hdm1	96	59.160	Seriola_lalandi_dorsalis
ENSCATG00000023642	R3HDM1	74	79.348	ENSSARG00000000352	-	69	82.060	Sorex_araneus
ENSCATG00000023642	R3HDM1	100	79.946	ENSSPUG00000004167	R3HDM1	97	86.822	Sphenodon_punctatus
ENSCATG00000023642	R3HDM1	87	63.200	ENSSPAG00000004648	r3hdm1	97	59.962	Stegastes_partitus
ENSCATG00000023642	R3HDM1	100	96.685	ENSSSCG00000015692	R3HDM1	100	95.948	Sus_scrofa
ENSCATG00000023642	R3HDM1	100	73.532	ENSTGUG00000011750	R3HDM1	99	81.783	Taeniopygia_guttata
ENSCATG00000023642	R3HDM1	82	65.831	ENSTRUG00000011654	r3hdm1	89	62.228	Takifugu_rubripes
ENSCATG00000023642	R3HDM1	87	45.867	ENSTNIG00000010362	r3hdm1	99	45.274	Tetraodon_nigroviridis
ENSCATG00000023642	R3HDM1	100	87.477	ENSTTRG00000003935	R3HDM1	100	91.068	Tursiops_truncatus
ENSCATG00000023642	R3HDM1	70	96.134	ENSUAMG00000024806	R3HDM1	93	97.670	Ursus_americanus
ENSCATG00000023642	R3HDM1	100	93.840	ENSUMAG00000005552	R3HDM1	100	93.943	Ursus_maritimus
ENSCATG00000023642	R3HDM1	97	94.118	ENSVPAG00000007333	R3HDM1	93	94.132	Vicugna_pacos
ENSCATG00000023642	R3HDM1	100	97.238	ENSVVUG00000006457	R3HDM1	100	94.718	Vulpes_vulpes
ENSCATG00000023642	R3HDM1	90	67.472	ENSXETG00000019330	r3hdm1	99	73.269	Xenopus_tropicalis
ENSCATG00000023642	R3HDM1	61	62.233	ENSXCOG00000017448	r3hdm1	94	61.848	Xiphophorus_couchianus
ENSCATG00000023642	R3HDM1	81	67.961	ENSXMAG00000007885	r3hdm1	88	61.600	Xiphophorus_maculatus