EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000029241 (Gene tree)
Gene ID: 105575719
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 24857 bases
Position: chrKQ012364.1:5734423-5759279
Accession: 105575719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000010139	PRP21_like_P	PF12230.8	2.3e-51	1	1
ENSCATP00000010109	PRP21_like_P	PF12230.8	2.3e-51	1	1
ENSCATP00000010139	Surp	PF01805.20	1.1e-45	1	2
ENSCATP00000010139	Surp	PF01805.20	1.1e-45	2	2
ENSCATP00000010109	Surp	PF01805.20	1.1e-45	1	2
ENSCATP00000010109	Surp	PF01805.20	1.1e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000034246	SF3A1-202	2379	-	ENSCATP00000010139	792 (aa)	-	A0A2K5LB04
ENSCATT00000034216	SF3A1-201	5977	XM_012037825	ENSCATP00000010109	793 (aa)	XP_011893215	A0A2K5LAX0

Gene Model

Click here to download ENSCATG00000029241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000029241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000029241	SF3A1	100	99.622	ENSG00000099995	SF3A1	100	99.622	Homo_sapiens
ENSCATG00000029241	SF3A1	100	83.145	ENSAPOG00000020465	sf3a1	99	84.783	Acanthochromis_polyacanthus
ENSCATG00000029241	SF3A1	100	98.491	ENSAMEG00000007737	SF3A1	100	98.491	Ailuropoda_melanoleuca
ENSCATG00000029241	SF3A1	100	84.528	ENSACIG00000020672	sf3a1	99	85.038	Amphilophus_citrinellus
ENSCATG00000029241	SF3A1	100	82.875	ENSAOCG00000003060	sf3a1	99	84.783	Amphiprion_ocellaris
ENSCATG00000029241	SF3A1	100	83.000	ENSAPEG00000010735	sf3a1	99	84.910	Amphiprion_percula
ENSCATG00000029241	SF3A1	96	85.938	ENSATEG00000021201	sf3a1	98	85.219	Anabas_testudineus
ENSCATG00000029241	SF3A1	95	94.188	ENSAPLG00000009057	SF3A1	99	93.290	Anas_platyrhynchos
ENSCATG00000029241	SF3A1	100	85.591	ENSACAG00000009415	SF3A1	100	86.823	Anolis_carolinensis
ENSCATG00000029241	SF3A1	100	99.243	ENSANAG00000032045	SF3A1	100	99.243	Aotus_nancymaae
ENSCATG00000029241	SF3A1	100	84.355	ENSACLG00000012622	sf3a1	99	85.403	Astatotilapia_calliptera
ENSCATG00000029241	SF3A1	99	83.439	ENSAMXG00000005382	sf3a1	99	84.299	Astyanax_mexicanus
ENSCATG00000029241	SF3A1	100	99.243	ENSBTAG00000003390	SF3A1	100	99.243	Bos_taurus
ENSCATG00000029241	SF3A1	84	43.447	WBGene00004188	prp-21	94	43.502	Caenorhabditis_elegans
ENSCATG00000029241	SF3A1	100	99.369	ENSCJAG00000010370	SF3A1	100	99.369	Callithrix_jacchus
ENSCATG00000029241	SF3A1	100	98.991	ENSCAFG00000012559	SF3A1	100	98.991	Canis_familiaris
ENSCATG00000029241	SF3A1	100	98.991	ENSCAFG00020000838	SF3A1	100	98.991	Canis_lupus_dingo
ENSCATG00000029241	SF3A1	100	99.117	ENSCHIG00000018642	SF3A1	100	99.117	Capra_hircus
ENSCATG00000029241	SF3A1	100	99.243	ENSTSYG00000004739	SF3A1	100	99.243	Carlito_syrichta
ENSCATG00000029241	SF3A1	94	81.417	ENSCAPG00000015414	SF3A1	98	81.417	Cavia_aperea
ENSCATG00000029241	SF3A1	100	98.865	ENSCPOG00000014589	SF3A1	100	98.865	Cavia_porcellus
ENSCATG00000029241	SF3A1	100	99.243	ENSCCAG00000032006	SF3A1	100	99.243	Cebus_capucinus
ENSCATG00000029241	SF3A1	100	98.739	ENSCLAG00000006508	SF3A1	100	98.739	Chinchilla_lanigera
ENSCATG00000029241	SF3A1	100	99.874	ENSCSAG00000009470	SF3A1	100	99.874	Chlorocebus_sabaeus
ENSCATG00000029241	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSCATG00000029241	SF3A1	100	90.932	ENSCPBG00000007595	SF3A1	100	91.058	Chrysemys_picta_bellii
ENSCATG00000029241	SF3A1	94	52.513	ENSCING00000008526	-	66	58.238	Ciona_intestinalis
ENSCATG00000029241	SF3A1	96	51.742	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSCATG00000029241	SF3A1	100	99.874	ENSCANG00000033564	SF3A1	100	99.874	Colobus_angolensis_palliatus
ENSCATG00000029241	SF3A1	100	98.613	ENSCGRG00001008933	Sf3a1	100	98.613	Cricetulus_griseus_chok1gshd
ENSCATG00000029241	SF3A1	100	98.613	ENSCGRG00000006127	Sf3a1	100	98.613	Cricetulus_griseus_crigri
ENSCATG00000029241	SF3A1	100	81.784	ENSCSEG00000010792	sf3a1	99	82.179	Cynoglossus_semilaevis
ENSCATG00000029241	SF3A1	100	83.145	ENSCVAG00000004560	sf3a1	98	84.375	Cyprinodon_variegatus
ENSCATG00000029241	SF3A1	100	82.538	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSCATG00000029241	SF3A1	100	98.868	ENSDNOG00000010629	SF3A1	100	98.868	Dasypus_novemcinctus
ENSCATG00000029241	SF3A1	100	99.117	ENSDORG00000005613	Sf3a1	100	99.117	Dipodomys_ordii
ENSCATG00000029241	SF3A1	83	60.387	FBgn0266917	Sf3a1	85	59.279	Drosophila_melanogaster
ENSCATG00000029241	SF3A1	89	95.869	ENSETEG00000017194	SF3A1	100	95.869	Echinops_telfairi
ENSCATG00000029241	SF3A1	98	66.102	ENSEBUG00000001285	sf3a1	96	66.914	Eptatretus_burgeri
ENSCATG00000029241	SF3A1	100	99.369	ENSEASG00005010254	SF3A1	100	99.369	Equus_asinus_asinus
ENSCATG00000029241	SF3A1	100	99.369	ENSECAG00000023962	SF3A1	100	99.369	Equus_caballus
ENSCATG00000029241	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSCATG00000029241	SF3A1	100	82.331	ENSELUG00000022578	sf3a1	98	82.692	Esox_lucius
ENSCATG00000029241	SF3A1	100	98.991	ENSFCAG00000011932	SF3A1	100	98.991	Felis_catus
ENSCATG00000029241	SF3A1	95	93.254	ENSFALG00000006944	SF3A1	100	91.814	Ficedula_albicollis
ENSCATG00000029241	SF3A1	100	99.117	ENSFDAG00000009560	SF3A1	100	99.117	Fukomys_damarensis
ENSCATG00000029241	SF3A1	100	84.277	ENSFHEG00000010866	sf3a1	98	85.547	Fundulus_heteroclitus
ENSCATG00000029241	SF3A1	100	81.234	ENSGMOG00000016024	sf3a1	99	80.485	Gadus_morhua
ENSCATG00000029241	SF3A1	95	94.180	ENSGALG00000007937	SF3A1	100	92.317	Gallus_gallus
ENSCATG00000029241	SF3A1	100	83.270	ENSGAFG00000009111	sf3a1	97	84.967	Gambusia_affinis
ENSCATG00000029241	SF3A1	100	82.494	ENSGACG00000011893	sf3a1	97	83.639	Gasterosteus_aculeatus
ENSCATG00000029241	SF3A1	96	91.064	ENSGAGG00000000762	SF3A1	99	91.196	Gopherus_agassizii
ENSCATG00000029241	SF3A1	100	99.622	ENSGGOG00000012631	SF3A1	100	99.622	Gorilla_gorilla
ENSCATG00000029241	SF3A1	100	84.355	ENSHBUG00000015795	sf3a1	99	85.403	Haplochromis_burtoni
ENSCATG00000029241	SF3A1	100	99.117	ENSHGLG00000007907	SF3A1	100	99.117	Heterocephalus_glaber_female
ENSCATG00000029241	SF3A1	100	99.117	ENSHGLG00100013799	SF3A1	100	99.117	Heterocephalus_glaber_male
ENSCATG00000029241	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.774	Hippocampus_comes
ENSCATG00000029241	SF3A1	96	82.682	ENSIPUG00000002470	sf3a1	98	82.943	Ictalurus_punctatus
ENSCATG00000029241	SF3A1	100	99.243	ENSSTOG00000013892	SF3A1	100	99.243	Ictidomys_tridecemlineatus
ENSCATG00000029241	SF3A1	100	98.992	ENSJJAG00000022566	Sf3a1	100	98.992	Jaculus_jaculus
ENSCATG00000029241	SF3A1	100	82.893	ENSKMAG00000002400	sf3a1	98	84.896	Kryptolebias_marmoratus
ENSCATG00000029241	SF3A1	100	82.642	ENSLBEG00000022974	sf3a1	99	83.226	Labrus_bergylta
ENSCATG00000029241	SF3A1	100	87.077	ENSLACG00000003565	SF3A1	97	88.281	Latimeria_chalumnae
ENSCATG00000029241	SF3A1	100	85.088	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSCATG00000029241	SF3A1	100	99.243	ENSLAFG00000000448	SF3A1	100	99.243	Loxodonta_africana
ENSCATG00000029241	SF3A1	98	62.420	ENSLAFG00000026032	-	98	62.038	Loxodonta_africana
ENSCATG00000029241	SF3A1	100	99.748	ENSMFAG00000031979	SF3A1	100	99.748	Macaca_fascicularis
ENSCATG00000029241	SF3A1	100	99.748	ENSMMUG00000005547	SF3A1	100	99.748	Macaca_mulatta
ENSCATG00000029241	SF3A1	100	99.622	ENSMNEG00000037229	SF3A1	100	99.622	Macaca_nemestrina
ENSCATG00000029241	SF3A1	100	99.874	ENSMLEG00000041908	SF3A1	100	99.874	Mandrillus_leucophaeus
ENSCATG00000029241	SF3A1	97	85.640	ENSMAMG00000006460	sf3a1	97	85.770	Mastacembelus_armatus
ENSCATG00000029241	SF3A1	100	84.355	ENSMZEG00005009633	sf3a1	99	85.403	Maylandia_zebra
ENSCATG00000029241	SF3A1	95	94.180	ENSMGAG00000001330	SF3A1	99	93.282	Meleagris_gallopavo
ENSCATG00000029241	SF3A1	92	95.082	ENSMAUG00000020317	Sf3a1	94	95.082	Mesocricetus_auratus
ENSCATG00000029241	SF3A1	100	99.496	ENSMICG00000010038	SF3A1	100	99.496	Microcebus_murinus
ENSCATG00000029241	SF3A1	100	98.739	ENSMOCG00000008438	Sf3a1	100	98.739	Microtus_ochrogaster
ENSCATG00000029241	SF3A1	100	81.635	ENSMMOG00000015588	sf3a1	98	82.239	Mola_mola
ENSCATG00000029241	SF3A1	100	97.856	ENSMODG00000009270	SF3A1	100	97.856	Monodelphis_domestica
ENSCATG00000029241	SF3A1	100	84.509	ENSMALG00000000148	sf3a1	99	86.104	Monopterus_albus
ENSCATG00000029241	SF3A1	100	98.487	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.487	Mus_caroli
ENSCATG00000029241	SF3A1	100	98.487	ENSMUSG00000002129	Sf3a1	100	98.487	Mus_musculus
ENSCATG00000029241	SF3A1	100	98.235	MGP_PahariEiJ_G0016862	Sf3a1	100	98.235	Mus_pahari
ENSCATG00000029241	SF3A1	100	98.487	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.487	Mus_spretus
ENSCATG00000029241	SF3A1	100	98.991	ENSMPUG00000013144	SF3A1	100	98.991	Mustela_putorius_furo
ENSCATG00000029241	SF3A1	100	99.117	ENSMLUG00000002139	SF3A1	100	99.117	Myotis_lucifugus
ENSCATG00000029241	SF3A1	100	98.991	ENSNGAG00000016977	Sf3a1	100	98.991	Nannospalax_galili
ENSCATG00000029241	SF3A1	100	83.770	ENSNBRG00000016642	sf3a1	96	86.825	Neolamprologus_brichardi
ENSCATG00000029241	SF3A1	100	99.874	ENSNLEG00000003686	SF3A1	100	99.874	Nomascus_leucogenys
ENSCATG00000029241	SF3A1	96	88.026	ENSMEUG00000008741	SF3A1	100	88.026	Notamacropus_eugenii
ENSCATG00000029241	SF3A1	100	98.361	ENSOPRG00000016636	SF3A1	100	98.361	Ochotona_princeps
ENSCATG00000029241	SF3A1	100	99.117	ENSODEG00000002571	SF3A1	100	99.117	Octodon_degus
ENSCATG00000029241	SF3A1	100	84.375	ENSONIG00000010848	sf3a1	99	84.783	Oreochromis_niloticus
ENSCATG00000029241	SF3A1	100	98.739	ENSOCUG00000007633	SF3A1	100	98.739	Oryctolagus_cuniculus
ENSCATG00000029241	SF3A1	96	82.021	ENSORLG00000013050	sf3a1	99	83.578	Oryzias_latipes
ENSCATG00000029241	SF3A1	96	82.808	ENSORLG00020003236	sf3a1	94	83.712	Oryzias_latipes_hni
ENSCATG00000029241	SF3A1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSCATG00000029241	SF3A1	100	82.767	ENSOMEG00000013362	sf3a1	99	83.613	Oryzias_melastigma
ENSCATG00000029241	SF3A1	100	99.369	ENSOGAG00000012931	SF3A1	100	99.369	Otolemur_garnettii
ENSCATG00000029241	SF3A1	100	97.352	ENSOARG00000006849	SF3A1	100	97.352	Ovis_aries
ENSCATG00000029241	SF3A1	100	98.613	ENSPPAG00000041790	SF3A1	100	98.613	Pan_paniscus
ENSCATG00000029241	SF3A1	100	98.991	ENSPPRG00000004391	SF3A1	100	98.991	Panthera_pardus
ENSCATG00000029241	SF3A1	97	98.964	ENSPTIG00000000844	SF3A1	100	98.964	Panthera_tigris_altaica
ENSCATG00000029241	SF3A1	100	99.622	ENSPTRG00000014240	SF3A1	100	99.622	Pan_troglodytes
ENSCATG00000029241	SF3A1	100	99.874	ENSPANG00000020772	SF3A1	100	99.874	Papio_anubis
ENSCATG00000029241	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSCATG00000029241	SF3A1	96	84.424	ENSPMGG00000023096	sf3a1	100	84.162	Periophthalmus_magnuspinnatus
ENSCATG00000029241	SF3A1	100	98.865	ENSPEMG00000009494	Sf3a1	100	98.865	Peromyscus_maniculatus_bairdii
ENSCATG00000029241	SF3A1	69	78.040	ENSPMAG00000007139	-	90	79.065	Petromyzon_marinus
ENSCATG00000029241	SF3A1	100	97.604	ENSPCIG00000022692	SF3A1	100	97.604	Phascolarctos_cinereus
ENSCATG00000029241	SF3A1	100	75.377	ENSPFOG00000016768	sf3a1	93	79.048	Poecilia_formosa
ENSCATG00000029241	SF3A1	100	83.668	ENSPLAG00000017268	sf3a1	97	85.229	Poecilia_latipinna
ENSCATG00000029241	SF3A1	84	86.145	ENSPMEG00000019811	sf3a1	98	85.392	Poecilia_mexicana
ENSCATG00000029241	SF3A1	100	83.794	ENSPREG00000010347	sf3a1	97	85.621	Poecilia_reticulata
ENSCATG00000029241	SF3A1	100	99.874	ENSPPYG00000011707	SF3A1	100	99.874	Pongo_abelii
ENSCATG00000029241	SF3A1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSCATG00000029241	SF3A1	100	99.496	ENSPCOG00000026630	SF3A1	100	99.496	Propithecus_coquereli
ENSCATG00000029241	SF3A1	100	94.704	ENSPVAG00000017719	SF3A1	94	98.121	Pteropus_vampyrus
ENSCATG00000029241	SF3A1	100	84.355	ENSPNYG00000018706	sf3a1	99	85.403	Pundamilia_nyererei
ENSCATG00000029241	SF3A1	97	84.724	ENSPNAG00000003721	sf3a1	99	84.596	Pygocentrus_nattereri
ENSCATG00000029241	SF3A1	100	98.361	ENSRNOG00000005218	Sf3a1	100	98.361	Rattus_norvegicus
ENSCATG00000029241	SF3A1	100	99.748	ENSRBIG00000032167	SF3A1	100	99.748	Rhinopithecus_bieti
ENSCATG00000029241	SF3A1	100	99.748	ENSRROG00000044908	SF3A1	100	99.748	Rhinopithecus_roxellana
ENSCATG00000029241	SF3A1	97	95.220	ENSSBOG00000021960	SF3A1	100	99.409	Saimiri_boliviensis_boliviensis
ENSCATG00000029241	SF3A1	99	93.544	ENSSHAG00000003666	SF3A1	98	95.213	Sarcophilus_harrisii
ENSCATG00000029241	SF3A1	100	83.375	ENSSFOG00015004579	sf3a1	99	85.128	Scleropages_formosus
ENSCATG00000029241	SF3A1	100	81.635	ENSSMAG00000004275	sf3a1	97	82.876	Scophthalmus_maximus
ENSCATG00000029241	SF3A1	100	83.648	ENSSDUG00000022219	sf3a1	99	84.655	Seriola_dumerili
ENSCATG00000029241	SF3A1	100	83.648	ENSSLDG00000012642	sf3a1	99	84.655	Seriola_lalandi_dorsalis
ENSCATG00000029241	SF3A1	97	95.725	ENSSARG00000005960	SF3A1	100	95.725	Sorex_araneus
ENSCATG00000029241	SF3A1	96	92.228	ENSSPUG00000018863	SF3A1	100	91.791	Sphenodon_punctatus
ENSCATG00000029241	SF3A1	100	84.403	ENSSPAG00000011856	sf3a1	99	84.783	Stegastes_partitus
ENSCATG00000029241	SF3A1	100	99.117	ENSSSCG00000010002	SF3A1	100	99.117	Sus_scrofa
ENSCATG00000029241	SF3A1	95	94.195	ENSTGUG00000010547	SF3A1	99	93.515	Taeniopygia_guttata
ENSCATG00000029241	SF3A1	100	81.635	ENSTRUG00000006118	sf3a1	97	82.484	Takifugu_rubripes
ENSCATG00000029241	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSCATG00000029241	SF3A1	100	91.929	ENSTBEG00000012771	SF3A1	100	91.929	Tupaia_belangeri
ENSCATG00000029241	SF3A1	100	98.866	ENSTTRG00000001535	SF3A1	100	98.866	Tursiops_truncatus
ENSCATG00000029241	SF3A1	99	98.221	ENSUAMG00000006750	SF3A1	99	98.221	Ursus_americanus
ENSCATG00000029241	SF3A1	99	98.214	ENSUMAG00000016665	SF3A1	99	98.214	Ursus_maritimus
ENSCATG00000029241	SF3A1	100	98.991	ENSVVUG00000003075	SF3A1	100	98.991	Vulpes_vulpes
ENSCATG00000029241	SF3A1	100	85.822	ENSXETG00000016144	sf3a1	100	85.445	Xenopus_tropicalis
ENSCATG00000029241	SF3A1	100	83.019	ENSXCOG00000015653	sf3a1	97	84.706	Xiphophorus_couchianus
ENSCATG00000029241	SF3A1	100	83.145	ENSXMAG00000002753	sf3a1	97	84.837	Xiphophorus_maculatus