EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000029786 (Gene tree)
Gene ID: 105587665
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 78382 bases
Position: chrKQ009701.1:5061210-5139591
Accession: 105587665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000011257	RNA_pol_Rpb1_5	PF04998.17	6.6e-104	1	1
ENSCATP00000011257	RNA_pol_Rpb1_4	PF05000.17	1.3e-25	1	1
ENSCATP00000011257	RNA_pol_Rpb1_2	PF00623.20	1.9e-70	1	1
ENSCATP00000011257	RNA_pol_Rpb1_3	PF04983.18	1.9e-35	1	1
ENSCATP00000011257	RNA_pol_Rpb1_1	PF04997.12	1.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000035378	POLR1A-201	8490	XM_012064117	ENSCATP00000011257	1720 (aa)	XP_011919507	A0A2K5LED3

Gene Model

Click here to download ENSCATG00000029786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000029786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000029786	POLR1A	62	32.796	ENSCATG00000035842	POLR3A	70	32.831
ENSCATG00000029786	POLR1A	88	30.769	ENSCATG00000013680	-	63	36.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000029786	POLR1A	100	97.849	ENSG00000068654	POLR1A	100	97.849	Homo_sapiens
ENSCATG00000029786	POLR1A	69	67.929	ENSAPOG00000017945	polr1a	99	68.266	Acanthochromis_polyacanthus
ENSCATG00000029786	POLR1A	100	91.337	ENSAMEG00000005807	POLR1A	100	92.725	Ailuropoda_melanoleuca
ENSCATG00000029786	POLR1A	100	63.246	ENSACIG00000022147	polr1a	100	62.978	Amphilophus_citrinellus
ENSCATG00000029786	POLR1A	100	65.767	ENSAOCG00000017336	polr1a	100	68.732	Amphiprion_ocellaris
ENSCATG00000029786	POLR1A	95	74.306	ENSAPEG00000016105	polr1a	98	74.306	Amphiprion_percula
ENSCATG00000029786	POLR1A	100	66.147	ENSATEG00000016773	polr1a	100	66.069	Anabas_testudineus
ENSCATG00000029786	POLR1A	86	73.035	ENSAPLG00000013871	POLR1A	99	73.035	Anas_platyrhynchos
ENSCATG00000029786	POLR1A	99	69.585	ENSACAG00000012141	POLR1A	99	68.714	Anolis_carolinensis
ENSCATG00000029786	POLR1A	100	95.058	ENSANAG00000033927	POLR1A	100	94.767	Aotus_nancymaae
ENSCATG00000029786	POLR1A	100	62.327	ENSACLG00000020541	polr1a	100	61.946	Astatotilapia_calliptera
ENSCATG00000029786	POLR1A	100	90.413	ENSBTAG00000006481	POLR1A	100	90.413	Bos_taurus
ENSCATG00000029786	POLR1A	99	38.513	WBGene00012999	rpoa-1	98	38.237	Caenorhabditis_elegans
ENSCATG00000029786	POLR1A	100	94.767	ENSCJAG00000019547	POLR1A	100	94.767	Callithrix_jacchus
ENSCATG00000029786	POLR1A	100	91.062	ENSCAFG00000007613	POLR1A	100	90.994	Canis_familiaris
ENSCATG00000029786	POLR1A	100	90.856	ENSCAFG00020014752	POLR1A	100	90.788	Canis_lupus_dingo
ENSCATG00000029786	POLR1A	100	88.297	ENSCHIG00000018204	POLR1A	100	88.239	Capra_hircus
ENSCATG00000029786	POLR1A	100	90.471	ENSTSYG00000002761	POLR1A	100	90.006	Carlito_syrichta
ENSCATG00000029786	POLR1A	97	84.377	ENSCAPG00000010132	POLR1A	100	84.528	Cavia_aperea
ENSCATG00000029786	POLR1A	100	88.908	ENSCPOG00000012350	POLR1A	100	89.199	Cavia_porcellus
ENSCATG00000029786	POLR1A	100	95.407	ENSCCAG00000019839	POLR1A	100	95.407	Cebus_capucinus
ENSCATG00000029786	POLR1A	100	89.333	ENSCLAG00000005187	POLR1A	100	89.159	Chinchilla_lanigera
ENSCATG00000029786	POLR1A	100	99.419	ENSCSAG00000016251	POLR1A	100	99.419	Chlorocebus_sabaeus
ENSCATG00000029786	POLR1A	99	74.448	ENSCPBG00000001115	POLR1A	99	74.724	Chrysemys_picta_bellii
ENSCATG00000029786	POLR1A	99	47.066	ENSCSAVG00000007184	-	99	47.012	Ciona_savignyi
ENSCATG00000029786	POLR1A	100	96.165	ENSCANG00000031785	POLR1A	100	96.165	Colobus_angolensis_palliatus
ENSCATG00000029786	POLR1A	100	82.727	ENSCGRG00001006651	Polr1a	100	83.382	Cricetulus_griseus_chok1gshd
ENSCATG00000029786	POLR1A	60	86.127	ENSCGRG00000010834	Polr1a	100	87.234	Cricetulus_griseus_crigri
ENSCATG00000029786	POLR1A	100	62.319	ENSCSEG00000020190	polr1a	100	62.123	Cynoglossus_semilaevis
ENSCATG00000029786	POLR1A	100	65.238	ENSCVAG00000020941	polr1a	100	64.994	Cyprinodon_variegatus
ENSCATG00000029786	POLR1A	100	66.976	ENSDARG00000098375	polr1a	100	67.111	Danio_rerio
ENSCATG00000029786	POLR1A	100	83.246	ENSDNOG00000010829	POLR1A	100	83.304	Dasypus_novemcinctus
ENSCATG00000029786	POLR1A	100	87.796	ENSDORG00000008298	Polr1a	100	88.201	Dipodomys_ordii
ENSCATG00000029786	POLR1A	80	44.341	FBgn0019938	RpI1	99	43.180	Drosophila_melanogaster
ENSCATG00000029786	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSCATG00000029786	POLR1A	88	66.667	ENSEBUG00000005667	-	99	66.667	Eptatretus_burgeri
ENSCATG00000029786	POLR1A	100	92.442	ENSEASG00005001625	POLR1A	100	92.442	Equus_asinus_asinus
ENSCATG00000029786	POLR1A	100	92.442	ENSECAG00000030510	-	100	93.555	Equus_caballus
ENSCATG00000029786	POLR1A	100	92.442	ENSECAG00000036306	-	100	93.555	Equus_caballus
ENSCATG00000029786	POLR1A	100	92.442	ENSECAG00000010092	POLR1A	100	93.555	Equus_caballus
ENSCATG00000029786	POLR1A	81	94.681	ENSEEUG00000000676	POLR1A	81	94.444	Erinaceus_europaeus
ENSCATG00000029786	POLR1A	100	67.091	ENSELUG00000012769	polr1a	99	66.782	Esox_lucius
ENSCATG00000029786	POLR1A	100	91.860	ENSFCAG00000008966	POLR1A	100	91.686	Felis_catus
ENSCATG00000029786	POLR1A	99	71.261	ENSFALG00000010082	POLR1A	99	71.077	Ficedula_albicollis
ENSCATG00000029786	POLR1A	100	89.082	ENSFDAG00000013726	POLR1A	100	88.618	Fukomys_damarensis
ENSCATG00000029786	POLR1A	100	62.159	ENSFHEG00000005996	polr1a	100	61.979	Fundulus_heteroclitus
ENSCATG00000029786	POLR1A	100	59.965	ENSGMOG00000002230	polr1a	100	59.988	Gadus_morhua
ENSCATG00000029786	POLR1A	90	69.621	ENSGALG00000038160	-	99	69.621	Gallus_gallus
ENSCATG00000029786	POLR1A	100	65.043	ENSGAFG00000015266	polr1a	100	65.336	Gambusia_affinis
ENSCATG00000029786	POLR1A	100	65.225	ENSGACG00000018791	polr1a	100	65.225	Gasterosteus_aculeatus
ENSCATG00000029786	POLR1A	89	74.984	ENSGAGG00000004984	-	96	80.531	Gopherus_agassizii
ENSCATG00000029786	POLR1A	100	97.907	ENSGGOG00000001788	POLR1A	100	97.907	Gorilla_gorilla
ENSCATG00000029786	POLR1A	90	64.337	ENSHBUG00000020021	polr1a	98	64.537	Haplochromis_burtoni
ENSCATG00000029786	POLR1A	100	89.257	ENSHGLG00000006334	POLR1A	100	89.547	Heterocephalus_glaber_female
ENSCATG00000029786	POLR1A	100	88.998	ENSHGLG00100006614	POLR1A	100	89.288	Heterocephalus_glaber_male
ENSCATG00000029786	POLR1A	100	62.154	ENSHCOG00000003345	polr1a	100	62.081	Hippocampus_comes
ENSCATG00000029786	POLR1A	100	66.223	ENSIPUG00000013174	polr1a	100	65.436	Ictalurus_punctatus
ENSCATG00000029786	POLR1A	99	87.667	ENSSTOG00000012580	POLR1A	99	87.842	Ictidomys_tridecemlineatus
ENSCATG00000029786	POLR1A	100	87.594	ENSJJAG00000013113	Polr1a	100	87.826	Jaculus_jaculus
ENSCATG00000029786	POLR1A	100	66.260	ENSKMAG00000007399	polr1a	100	66.086	Kryptolebias_marmoratus
ENSCATG00000029786	POLR1A	95	68.579	ENSLBEG00000015401	polr1a	99	68.131	Labrus_bergylta
ENSCATG00000029786	POLR1A	53	76.279	ENSLACG00000003218	polr1a	100	76.279	Latimeria_chalumnae
ENSCATG00000029786	POLR1A	100	70.588	ENSLOCG00000010881	polr1a	100	70.242	Lepisosteus_oculatus
ENSCATG00000029786	POLR1A	100	90.046	ENSLAFG00000014948	POLR1A	100	90.162	Loxodonta_africana
ENSCATG00000029786	POLR1A	100	99.709	ENSMFAG00000046097	POLR1A	100	99.709	Macaca_fascicularis
ENSCATG00000029786	POLR1A	100	99.593	ENSMMUG00000015815	POLR1A	100	99.593	Macaca_mulatta
ENSCATG00000029786	POLR1A	100	99.651	ENSMNEG00000043313	POLR1A	100	99.651	Macaca_nemestrina
ENSCATG00000029786	POLR1A	100	99.128	ENSMLEG00000042428	POLR1A	100	99.128	Mandrillus_leucophaeus
ENSCATG00000029786	POLR1A	100	65.879	ENSMAMG00000016565	polr1a	100	66.512	Mastacembelus_armatus
ENSCATG00000029786	POLR1A	100	65.933	ENSMZEG00005004915	polr1a	100	65.683	Maylandia_zebra
ENSCATG00000029786	POLR1A	99	69.101	ENSMGAG00000013111	POLR1A	99	69.101	Meleagris_gallopavo
ENSCATG00000029786	POLR1A	92	87.146	ENSMAUG00000008497	Polr1a	100	87.492	Mesocricetus_auratus
ENSCATG00000029786	POLR1A	100	92.795	ENSMICG00000000757	POLR1A	100	92.504	Microcebus_murinus
ENSCATG00000029786	POLR1A	100	87.319	ENSMOCG00000000122	Polr1a	100	87.782	Microtus_ochrogaster
ENSCATG00000029786	POLR1A	100	65.273	ENSMMOG00000010216	polr1a	100	65.099	Mola_mola
ENSCATG00000029786	POLR1A	100	75.316	ENSMODG00000009335	POLR1A	100	74.914	Monodelphis_domestica
ENSCATG00000029786	POLR1A	100	65.991	ENSMALG00000013363	polr1a	100	65.227	Monopterus_albus
ENSCATG00000029786	POLR1A	100	85.739	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.640	Mus_caroli
ENSCATG00000029786	POLR1A	100	86.277	ENSMUSG00000049553	Polr1a	100	85.929	Mus_musculus
ENSCATG00000029786	POLR1A	100	86.798	MGP_PahariEiJ_G0022230	Polr1a	100	86.450	Mus_pahari
ENSCATG00000029786	POLR1A	100	84.690	MGP_SPRETEiJ_G0029499	Polr1a	100	84.760	Mus_spretus
ENSCATG00000029786	POLR1A	100	91.163	ENSMPUG00000009135	POLR1A	100	91.105	Mustela_putorius_furo
ENSCATG00000029786	POLR1A	100	90.052	ENSMLUG00000015723	POLR1A	100	89.705	Myotis_lucifugus
ENSCATG00000029786	POLR1A	100	87.702	ENSNGAG00000017907	Polr1a	100	88.542	Nannospalax_galili
ENSCATG00000029786	POLR1A	100	65.167	ENSNBRG00000000519	polr1a	100	65.876	Neolamprologus_brichardi
ENSCATG00000029786	POLR1A	100	95.602	ENSNLEG00000002264	POLR1A	100	95.602	Nomascus_leucogenys
ENSCATG00000029786	POLR1A	75	93.701	ENSMEUG00000011665	-	75	93.701	Notamacropus_eugenii
ENSCATG00000029786	POLR1A	99	82.923	ENSOPRG00000008269	POLR1A	100	82.805	Ochotona_princeps
ENSCATG00000029786	POLR1A	100	89.605	ENSODEG00000003542	POLR1A	100	89.431	Octodon_degus
ENSCATG00000029786	POLR1A	100	66.242	ENSONIG00000015895	polr1a	100	66.242	Oreochromis_niloticus
ENSCATG00000029786	POLR1A	100	91.110	ENSOCUG00000010138	POLR1A	100	91.110	Oryctolagus_cuniculus
ENSCATG00000029786	POLR1A	100	65.278	ENSORLG00000008753	polr1a	99	65.200	Oryzias_latipes
ENSCATG00000029786	POLR1A	100	64.178	ENSORLG00020020726	polr1a	99	63.752	Oryzias_latipes_hni
ENSCATG00000029786	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSCATG00000029786	POLR1A	100	91.337	ENSOGAG00000004031	POLR1A	100	91.337	Otolemur_garnettii
ENSCATG00000029786	POLR1A	100	89.727	ENSOARG00000020601	POLR1A	100	89.785	Ovis_aries
ENSCATG00000029786	POLR1A	100	97.558	ENSPPAG00000042450	POLR1A	100	97.558	Pan_paniscus
ENSCATG00000029786	POLR1A	100	92.093	ENSPPRG00000006702	POLR1A	100	91.744	Panthera_pardus
ENSCATG00000029786	POLR1A	100	91.541	ENSPTIG00000018783	POLR1A	100	91.194	Panthera_tigris_altaica
ENSCATG00000029786	POLR1A	100	97.384	ENSPTRG00000012147	POLR1A	100	97.384	Pan_troglodytes
ENSCATG00000029786	POLR1A	100	99.767	ENSPANG00000025908	POLR1A	100	99.767	Papio_anubis
ENSCATG00000029786	POLR1A	94	77.083	ENSPKIG00000005468	polr1a	99	77.083	Paramormyrops_kingsleyae
ENSCATG00000029786	POLR1A	63	69.946	ENSPSIG00000009321	-	99	70.891	Pelodiscus_sinensis
ENSCATG00000029786	POLR1A	54	68.556	ENSPMGG00000009718	polr1a	95	68.556	Periophthalmus_magnuspinnatus
ENSCATG00000029786	POLR1A	83	90.336	ENSPEMG00000022224	Polr1a	100	88.709	Peromyscus_maniculatus_bairdii
ENSCATG00000029786	POLR1A	95	79.405	ENSPCIG00000004222	POLR1A	99	78.663	Phascolarctos_cinereus
ENSCATG00000029786	POLR1A	100	65.643	ENSPFOG00000005025	polr1a	100	65.585	Poecilia_formosa
ENSCATG00000029786	POLR1A	100	65.991	ENSPLAG00000021389	polr1a	100	65.759	Poecilia_latipinna
ENSCATG00000029786	POLR1A	100	63.847	ENSPMEG00000006463	polr1a	100	64.157	Poecilia_mexicana
ENSCATG00000029786	POLR1A	100	65.585	ENSPREG00000002389	polr1a	100	65.547	Poecilia_reticulata
ENSCATG00000029786	POLR1A	100	97.035	ENSPPYG00000012217	POLR1A	100	97.035	Pongo_abelii
ENSCATG00000029786	POLR1A	88	96.000	ENSPCAG00000011582	POLR1A	88	96.000	Procavia_capensis
ENSCATG00000029786	POLR1A	100	92.446	ENSPCOG00000026987	POLR1A	100	92.330	Propithecus_coquereli
ENSCATG00000029786	POLR1A	95	91.912	ENSPVAG00000012674	POLR1A	95	91.166	Pteropus_vampyrus
ENSCATG00000029786	POLR1A	100	65.933	ENSPNYG00000000026	polr1a	100	65.683	Pundamilia_nyererei
ENSCATG00000029786	POLR1A	100	67.225	ENSPNAG00000019223	polr1a	99	67.755	Pygocentrus_nattereri
ENSCATG00000029786	POLR1A	100	88.188	ENSRNOG00000009545	Polr1a	100	87.840	Rattus_norvegicus
ENSCATG00000029786	POLR1A	100	98.605	ENSRBIG00000028335	POLR1A	100	98.605	Rhinopithecus_bieti
ENSCATG00000029786	POLR1A	100	98.547	ENSRROG00000031473	POLR1A	100	98.547	Rhinopithecus_roxellana
ENSCATG00000029786	POLR1A	99	36.877	YOR341W	RPA190	99	37.010	Saccharomyces_cerevisiae
ENSCATG00000029786	POLR1A	100	94.535	ENSSBOG00000030262	POLR1A	100	94.535	Saimiri_boliviensis_boliviensis
ENSCATG00000029786	POLR1A	100	74.063	ENSSHAG00000014739	POLR1A	100	73.192	Sarcophilus_harrisii
ENSCATG00000029786	POLR1A	100	67.766	ENSSFOG00015019716	polr1a	100	67.070	Scleropages_formosus
ENSCATG00000029786	POLR1A	100	66.609	ENSSMAG00000014342	polr1a	100	66.300	Scophthalmus_maximus
ENSCATG00000029786	POLR1A	100	66.898	ENSSDUG00000014631	polr1a	100	66.821	Seriola_dumerili
ENSCATG00000029786	POLR1A	100	64.832	ENSSLDG00000024095	polr1a	100	64.812	Seriola_lalandi_dorsalis
ENSCATG00000029786	POLR1A	75	97.872	ENSSARG00000003136	-	76	97.872	Sorex_araneus
ENSCATG00000029786	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSCATG00000029786	POLR1A	63	72.336	ENSSPAG00000016341	polr1a	94	72.336	Stegastes_partitus
ENSCATG00000029786	POLR1A	83	91.801	ENSSSCG00000008226	POLR1A	99	91.778	Sus_scrofa
ENSCATG00000029786	POLR1A	99	70.294	ENSTGUG00000010704	POLR1A	100	70.471	Taeniopygia_guttata
ENSCATG00000029786	POLR1A	100	64.113	ENSTRUG00000002210	polr1a	99	63.668	Takifugu_rubripes
ENSCATG00000029786	POLR1A	100	60.437	ENSTNIG00000010116	polr1a	100	60.414	Tetraodon_nigroviridis
ENSCATG00000029786	POLR1A	74	97.788	ENSTBEG00000008646	POLR1A	70	100.000	Tupaia_belangeri
ENSCATG00000029786	POLR1A	100	86.628	ENSTTRG00000008597	POLR1A	100	86.221	Tursiops_truncatus
ENSCATG00000029786	POLR1A	69	91.631	ENSUAMG00000012158	-	94	91.040	Ursus_americanus
ENSCATG00000029786	POLR1A	100	90.698	ENSUMAG00000006700	POLR1A	100	90.291	Ursus_maritimus
ENSCATG00000029786	POLR1A	100	90.888	ENSVVUG00000001245	POLR1A	100	90.819	Vulpes_vulpes
ENSCATG00000029786	POLR1A	100	67.843	ENSXETG00000001952	polr1a	100	69.398	Xenopus_tropicalis
ENSCATG00000029786	POLR1A	100	65.761	ENSXMAG00000004032	polr1a	100	65.703	Xiphophorus_maculatus