EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000029959 (Gene tree)
Gene ID: 105592498
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 15278 bases
Position: chrKQ010258.1:4453857-4469134
Accession: 105592498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000011614	MBD	PF01429.19	4.4e-16	1	1
ENSCATP00000011538	MBD	PF01429.19	4.5e-16	1	1
ENSCATP00000011547	MBD	PF01429.19	4.5e-16	1	1
ENSCATP00000011534	MBD	PF01429.19	4.6e-16	1	1
ENSCATP00000011611	MBD	PF01429.19	4.6e-16	1	1
ENSCATP00000011517	MBD	PF01429.19	4.8e-16	1	1
ENSCATP00000011536	MBD	PF01429.19	5.1e-16	1	1
ENSCATP00000011530	MBD	PF01429.19	5.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000035662	MBD1-205	5015	XM_012074577	ENSCATP00000011538	556 (aa)	XP_011929967	A0A2K5LF14
ENSCATT00000035671	MBD1-206	5016	XM_012074582	ENSCATP00000011547	559 (aa)	XP_011929972	A0A2K5LF80
ENSCATT00000035660	MBD1-204	5164	XM_012074563	ENSCATP00000011536	605 (aa)	XP_011929953	A0A2K5LF05
ENSCATT00000035658	MBD1-203	3261	XM_012074585	ENSCATP00000011534	567 (aa)	XP_011929975	A0A2K5LF01
ENSCATT00000035641	MBD1-201	5084	XM_012074574	ENSCATP00000011517	574 (aa)	XP_011929964	A0A2K5LF54
ENSCATT00000035654	MBD1-202	5251	XM_012074559	ENSCATP00000011530	630 (aa)	XP_011929949	A0A2K5LEZ4
ENSCATT00000035737	MBD1-207	1761	XM_012074565	ENSCATP00000011611	586 (aa)	XP_011929955	A0A2K5LF75
ENSCATT00000035740	MBD1-208	1653	-	ENSCATP00000011614	550 (aa)	-	A0A2K5LFA8

Gene Model

Click here to download ENSCATG00000029959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000029959's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000029959	MBD1	100	99.524	ENSG00000141644	MBD1	100	99.524	Homo_sapiens
ENSCATG00000029959	MBD1	66	36.066	ENSAPOG00000012810	mbd1b	50	34.204	Acanthochromis_polyacanthus
ENSCATG00000029959	MBD1	100	87.975	ENSAMEG00000000238	MBD1	96	87.342	Ailuropoda_melanoleuca
ENSCATG00000029959	MBD1	69	34.466	ENSAOCG00000020272	mbd1b	52	32.947	Amphiprion_ocellaris
ENSCATG00000029959	MBD1	69	34.466	ENSAPEG00000023230	mbd1b	52	31.787	Amphiprion_percula
ENSCATG00000029959	MBD1	58	47.674	ENSATEG00000009608	mbd1b	51	31.616	Anabas_testudineus
ENSCATG00000029959	MBD1	69	45.455	ENSACAG00000006091	-	100	45.763	Anolis_carolinensis
ENSCATG00000029959	MBD1	100	96.508	ENSANAG00000036253	MBD1	100	96.508	Aotus_nancymaae
ENSCATG00000029959	MBD1	100	86.529	ENSBTAG00000003801	MBD1	100	86.688	Bos_taurus
ENSCATG00000029959	MBD1	100	96.416	ENSCJAG00000004959	MBD1	100	96.416	Callithrix_jacchus
ENSCATG00000029959	MBD1	100	87.005	ENSCAFG00000018928	MBD1	96	87.797	Canis_familiaris
ENSCATG00000029959	MBD1	99	86.196	ENSCAFG00020024272	MBD1	97	86.998	Canis_lupus_dingo
ENSCATG00000029959	MBD1	100	86.529	ENSCHIG00000021134	MBD1	100	86.688	Capra_hircus
ENSCATG00000029959	MBD1	100	91.111	ENSTSYG00000000509	MBD1	100	91.111	Carlito_syrichta
ENSCATG00000029959	MBD1	99	69.258	ENSCAPG00000015782	MBD1	96	68.421	Cavia_aperea
ENSCATG00000029959	MBD1	100	74.124	ENSCPOG00000001671	MBD1	100	73.957	Cavia_porcellus
ENSCATG00000029959	MBD1	100	94.489	ENSCCAG00000034600	MBD1	100	94.251	Cebus_capucinus
ENSCATG00000029959	MBD1	100	85.556	ENSCLAG00000007457	MBD1	89	85.556	Chinchilla_lanigera
ENSCATG00000029959	MBD1	100	99.669	ENSCSAG00000018070	MBD1	100	99.669	Chlorocebus_sabaeus
ENSCATG00000029959	MBD1	100	99.365	ENSCANG00000033425	MBD1	100	99.365	Colobus_angolensis_palliatus
ENSCATG00000029959	MBD1	100	75.041	ENSCGRG00001014843	Mbd1	100	75.041	Cricetulus_griseus_chok1gshd
ENSCATG00000029959	MBD1	99	63.492	ENSCGRG00000014135	Mbd1	84	79.310	Cricetulus_griseus_crigri
ENSCATG00000029959	MBD1	61	49.412	ENSCSEG00000009082	mbd1b	53	49.412	Cynoglossus_semilaevis
ENSCATG00000029959	MBD1	54	56.923	ENSCVAG00000001167	mbd1b	52	32.251	Cyprinodon_variegatus
ENSCATG00000029959	MBD1	100	82.409	ENSDNOG00000015998	MBD1	100	83.677	Dasypus_novemcinctus
ENSCATG00000029959	MBD1	99	74.558	ENSDORG00000013917	Mbd1	97	79.268	Dipodomys_ordii
ENSCATG00000029959	MBD1	100	86.709	ENSEASG00005003857	MBD1	100	88.291	Equus_asinus_asinus
ENSCATG00000029959	MBD1	100	86.656	ENSECAG00000011497	MBD1	80	88.303	Equus_caballus
ENSCATG00000029959	MBD1	85	50.725	ENSELUG00000004375	mbd1b	52	50.725	Esox_lucius
ENSCATG00000029959	MBD1	100	88.608	ENSFCAG00000015730	MBD1	100	88.133	Felis_catus
ENSCATG00000029959	MBD1	99	80.492	ENSFDAG00000011085	MBD1	96	80.480	Fukomys_damarensis
ENSCATG00000029959	MBD1	75	31.207	ENSFHEG00000020120	mbd1b	51	31.829	Fundulus_heteroclitus
ENSCATG00000029959	MBD1	54	52.308	ENSGAFG00000008975	mbd1b	53	38.119	Gambusia_affinis
ENSCATG00000029959	MBD1	70	31.061	ENSGACG00000012106	-	50	60.656	Gasterosteus_aculeatus
ENSCATG00000029959	MBD1	100	99.206	ENSGGOG00000016966	MBD1	100	99.206	Gorilla_gorilla
ENSCATG00000029959	MBD1	100	85.950	ENSHGLG00000008740	MBD1	100	85.950	Heterocephalus_glaber_female
ENSCATG00000029959	MBD1	100	80.488	ENSHGLG00100005198	MBD1	100	88.274	Heterocephalus_glaber_male
ENSCATG00000029959	MBD1	70	35.577	ENSHCOG00000009952	mbd1b	53	33.094	Hippocampus_comes
ENSCATG00000029959	MBD1	62	38.650	ENSIPUG00000015243	-	50	50.602	Ictalurus_punctatus
ENSCATG00000029959	MBD1	100	83.415	ENSSTOG00000007780	MBD1	100	83.740	Ictidomys_tridecemlineatus
ENSCATG00000029959	MBD1	98	75.709	ENSJJAG00000022859	Mbd1	96	75.709	Jaculus_jaculus
ENSCATG00000029959	MBD1	96	35.145	ENSLACG00000002414	-	78	36.000	Latimeria_chalumnae
ENSCATG00000029959	MBD1	99	76.119	ENSLAFG00000031328	MBD1	97	76.119	Loxodonta_africana
ENSCATG00000029959	MBD1	100	99.524	ENSMFAG00000026335	MBD1	100	99.524	Macaca_fascicularis
ENSCATG00000029959	MBD1	100	99.524	ENSMMUG00000009050	MBD1	100	99.524	Macaca_mulatta
ENSCATG00000029959	MBD1	100	99.524	ENSMNEG00000038822	MBD1	100	99.524	Macaca_nemestrina
ENSCATG00000029959	MBD1	100	99.841	ENSMLEG00000043121	MBD1	100	99.841	Mandrillus_leucophaeus
ENSCATG00000029959	MBD1	53	55.385	ENSMAMG00000023341	-	51	59.155	Mastacembelus_armatus
ENSCATG00000029959	MBD1	100	90.081	ENSMICG00000006414	MBD1	100	90.407	Microcebus_murinus
ENSCATG00000029959	MBD1	70	43.415	ENSMODG00000001286	-	58	44.186	Monodelphis_domestica
ENSCATG00000029959	MBD1	52	48.485	ENSMALG00000007808	mbd1b	52	33.191	Monopterus_albus
ENSCATG00000029959	MBD1	99	67.568	ENSMUSG00000024561	Mbd1	97	68.471	Mus_musculus
ENSCATG00000029959	MBD1	100	68.362	MGP_PahariEiJ_G0019128	Mbd1	100	68.680	Mus_pahari
ENSCATG00000029959	MBD1	98	68.882	MGP_SPRETEiJ_G0023304	Mbd1	99	69.643	Mus_spretus
ENSCATG00000029959	MBD1	100	87.500	ENSMPUG00000008843	MBD1	96	87.025	Mustela_putorius_furo
ENSCATG00000029959	MBD1	100	85.556	ENSMLUG00000008286	MBD1	96	85.556	Myotis_lucifugus
ENSCATG00000029959	MBD1	98	73.391	ENSNGAG00000011412	Mbd1	96	73.391	Nannospalax_galili
ENSCATG00000029959	MBD1	100	83.618	ENSNLEG00000032711	-	100	83.618	Nomascus_leucogenys
ENSCATG00000029959	MBD1	100	98.843	ENSNLEG00000011661	-	100	98.843	Nomascus_leucogenys
ENSCATG00000029959	MBD1	100	75.041	ENSOPRG00000007647	MBD1	100	75.041	Ochotona_princeps
ENSCATG00000029959	MBD1	99	78.092	ENSODEG00000018451	MBD1	97	78.975	Octodon_degus
ENSCATG00000029959	MBD1	65	37.500	ENSONIG00000020289	mbd1b	50	31.707	Oreochromis_niloticus
ENSCATG00000029959	MBD1	92	46.516	ENSOANG00000014593	-	100	47.059	Ornithorhynchus_anatinus
ENSCATG00000029959	MBD1	100	83.835	ENSOCUG00000006554	MBD1	100	84.311	Oryctolagus_cuniculus
ENSCATG00000029959	MBD1	100	87.500	ENSOGAG00000003784	MBD1	96	87.500	Otolemur_garnettii
ENSCATG00000029959	MBD1	100	86.234	ENSOARG00000004218	MBD1	95	86.392	Ovis_aries
ENSCATG00000029959	MBD1	100	99.339	ENSPPAG00000038886	MBD1	100	99.339	Pan_paniscus
ENSCATG00000029959	MBD1	100	88.797	ENSPPRG00000021387	MBD1	100	88.303	Panthera_pardus
ENSCATG00000029959	MBD1	100	88.797	ENSPTIG00000021231	MBD1	100	88.303	Panthera_tigris_altaica
ENSCATG00000029959	MBD1	100	99.365	ENSPTRG00000010021	MBD1	100	99.365	Pan_troglodytes
ENSCATG00000029959	MBD1	100	99.829	ENSPANG00000010867	MBD1	100	99.829	Papio_anubis
ENSCATG00000029959	MBD1	99	63.993	ENSPEMG00000022630	Mbd1	97	63.932	Peromyscus_maniculatus_bairdii
ENSCATG00000029959	MBD1	96	47.947	ENSPCIG00000027937	-	84	45.234	Phascolarctos_cinereus
ENSCATG00000029959	MBD1	55	53.846	ENSPFOG00000007511	mbd1b	53	33.668	Poecilia_formosa
ENSCATG00000029959	MBD1	54	53.846	ENSPLAG00000021258	mbd1b	53	33.668	Poecilia_latipinna
ENSCATG00000029959	MBD1	62	53.846	ENSPMEG00000024145	mbd1b	51	52.174	Poecilia_mexicana
ENSCATG00000029959	MBD1	54	53.846	ENSPREG00000021805	mbd1b	53	33.668	Poecilia_reticulata
ENSCATG00000029959	MBD1	100	99.339	ENSPPYG00000009158	MBD1	91	99.339	Pongo_abelii
ENSCATG00000029959	MBD1	99	76.694	ENSPCAG00000001648	MBD1	93	86.260	Procavia_capensis
ENSCATG00000029959	MBD1	100	92.739	ENSPCOG00000012450	MBD1	100	92.739	Propithecus_coquereli
ENSCATG00000029959	MBD1	99	52.257	ENSRNOG00000024104	Mbd1	96	55.308	Rattus_norvegicus
ENSCATG00000029959	MBD1	100	99.101	ENSRBIG00000041294	MBD1	100	99.101	Rhinopithecus_bieti
ENSCATG00000029959	MBD1	100	99.206	ENSRROG00000032517	MBD1	100	99.206	Rhinopithecus_roxellana
ENSCATG00000029959	MBD1	100	95.819	ENSSBOG00000027169	MBD1	100	95.819	Saimiri_boliviensis_boliviensis
ENSCATG00000029959	MBD1	84	46.253	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSCATG00000029959	MBD1	51	48.913	ENSSPAG00000021447	mbd1b	55	32.407	Stegastes_partitus
ENSCATG00000029959	MBD1	100	86.446	ENSSSCG00000004516	MBD1	98	88.528	Sus_scrofa
ENSCATG00000029959	MBD1	51	50.538	ENSTRUG00000013422	mbd1b	54	30.464	Takifugu_rubripes
ENSCATG00000029959	MBD1	74	84.167	ENSTBEG00000012651	-	68	84.167	Tupaia_belangeri
ENSCATG00000029959	MBD1	100	85.008	ENSTTRG00000015523	MBD1	100	84.514	Tursiops_truncatus
ENSCATG00000029959	MBD1	100	83.333	ENSUAMG00000004752	MBD1	100	84.323	Ursus_americanus
ENSCATG00000029959	MBD1	100	88.138	ENSUMAG00000002947	MBD1	100	87.479	Ursus_maritimus
ENSCATG00000029959	MBD1	54	53.846	ENSXMAG00000005628	mbd1b	52	33.668	Xiphophorus_maculatus