EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000030302 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 26062 bases
Position: chrKQ009547.1:3529082-3555143
Accession: 105573250
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000012256	APOBEC_N	PF08210.11	6e-35	1	1
ENSCATP00000012268	APOBEC_N	PF08210.11	8.5e-35	1	1
ENSCATP00000012269	APOBEC_N	PF08210.11	8.4e-27	1	1
ENSCATP00000012256	APOBEC_C	PF05240.14	3.1e-27	1	1
ENSCATP00000012268	APOBEC_C	PF05240.14	3.9e-27	1	1
ENSCATP00000012269	APOBEC_C	PF05240.14	5.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000036384	APOBEC3H-201	1331	XM_012032558	ENSCATP00000012256	180 (aa)	XP_011887948	A0A2K5LH58
ENSCATT00000036397	APOBEC3H-203	462	-	ENSCATP00000012269	153 (aa)	-	A0A2K5LH47
ENSCATT00000036396	APOBEC3H-202	600	-	ENSCATP00000012268	199 (aa)	-	A0A2K5LH15

Gene Model

Click here to download ENSCATG00000030302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000030302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000030302	APOBEC3H	99	36.257	ENSCATG00000033502	-	82	36.196
ENSCATG00000030302	APOBEC3H	99	35.294	ENSCATG00000043226	APOBEC3C	95	35.294
ENSCATG00000030302	APOBEC3H	98	35.165	ENSCATG00000039986	AICDA	92	35.507
ENSCATG00000030302	APOBEC3H	72	31.298	ENSCATG00000021613	APOBEC1	52	31.298
ENSCATG00000030302	APOBEC3H	98	36.269	ENSCATG00000013527	-	93	36.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000030302	APOBEC3H	100	82.500	ENSG00000100298	APOBEC3H	100	82.500	Homo_sapiens
ENSCATG00000030302	APOBEC3H	99	49.189	ENSAMEG00000010818	-	76	49.189	Ailuropoda_melanoleuca
ENSCATG00000030302	APOBEC3H	100	72.973	ENSANAG00000025410	APOBEC3H	83	72.973	Aotus_nancymaae
ENSCATG00000030302	APOBEC3H	99	51.111	ENSBTAG00000007755	APOBEC3H	89	51.111	Bos_taurus
ENSCATG00000030302	APOBEC3H	100	73.000	ENSCJAG00000012524	APOBEC3H	100	73.000	Callithrix_jacchus
ENSCATG00000030302	APOBEC3H	99	51.667	ENSCAFG00000001361	APOBEC3Z3	93	51.366	Canis_familiaris
ENSCATG00000030302	APOBEC3H	99	51.111	ENSCAFG00020002584	-	95	50.794	Canis_lupus_dingo
ENSCATG00000030302	APOBEC3H	99	50.556	ENSCHIG00000026580	-	95	50.556	Capra_hircus
ENSCATG00000030302	APOBEC3H	98	51.685	ENSTSYG00000032894	-	100	51.685	Carlito_syrichta
ENSCATG00000030302	APOBEC3H	100	54.494	ENSCPOG00000009257	-	86	54.494	Cavia_porcellus
ENSCATG00000030302	APOBEC3H	100	73.885	ENSCCAG00000008525	APOBEC3H	100	73.885	Cebus_capucinus
ENSCATG00000030302	APOBEC3H	98	55.367	ENSCLAG00000016615	-	86	55.367	Chinchilla_lanigera
ENSCATG00000030302	APOBEC3H	100	91.160	ENSCSAG00000006371	APOBEC3H	86	91.160	Chlorocebus_sabaeus
ENSCATG00000030302	APOBEC3H	100	53.514	ENSCGRG00001022976	Apobec3	83	53.514	Cricetulus_griseus_chok1gshd
ENSCATG00000030302	APOBEC3H	100	53.514	ENSCGRG00000005621	Apobec3	83	53.514	Cricetulus_griseus_crigri
ENSCATG00000030302	APOBEC3H	99	51.351	ENSDORG00000027271	-	99	43.878	Dipodomys_ordii
ENSCATG00000030302	APOBEC3H	98	51.685	ENSECAG00000007726	APOBEC3H	75	51.685	Equus_caballus
ENSCATG00000030302	APOBEC3H	99	52.778	ENSFCAG00000005251	APOBEC3Z3	93	52.459	Felis_catus
ENSCATG00000030302	APOBEC3H	99	51.667	ENSSTOG00000007125	-	85	51.667	Ictidomys_tridecemlineatus
ENSCATG00000030302	APOBEC3H	92	49.265	ENSJJAG00000016840	-	78	49.265	Jaculus_jaculus
ENSCATG00000030302	APOBEC3H	99	51.685	ENSLAFG00000027404	-	94	51.685	Loxodonta_africana
ENSCATG00000030302	APOBEC3H	100	95.455	ENSMFAG00000031827	APOBEC3H	100	95.455	Macaca_fascicularis
ENSCATG00000030302	APOBEC3H	100	94.805	ENSMMUG00000001016	APOBEC3H	100	94.805	Macaca_mulatta
ENSCATG00000030302	APOBEC3H	100	94.805	ENSMNEG00000039259	APOBEC3H	100	94.805	Macaca_nemestrina
ENSCATG00000030302	APOBEC3H	100	96.753	ENSMLEG00000033417	APOBEC3H	100	96.753	Mandrillus_leucophaeus
ENSCATG00000030302	APOBEC3H	100	51.351	ENSMAUG00000011683	Apobec3	86	51.351	Mesocricetus_auratus
ENSCATG00000030302	APOBEC3H	99	50.556	ENSMOCG00000021576	Apobec3	83	52.222	Microtus_ochrogaster
ENSCATG00000030302	APOBEC3H	100	49.457	MGP_CAROLIEiJ_G0020029	Apobec3	98	41.667	Mus_caroli
ENSCATG00000030302	APOBEC3H	98	46.988	ENSMUSG00000009585	Apobec3	97	47.423	Mus_musculus
ENSCATG00000030302	APOBEC3H	100	48.925	MGP_PahariEiJ_G0020031	-	86	48.925	Mus_pahari
ENSCATG00000030302	APOBEC3H	99	46.961	MGP_SPRETEiJ_G0020927	Apobec3	98	40.476	Mus_spretus
ENSCATG00000030302	APOBEC3H	99	52.514	ENSMPUG00000013239	-	71	52.514	Mustela_putorius_furo
ENSCATG00000030302	APOBEC3H	100	49.438	ENSNGAG00000018998	Apobec3	91	49.438	Nannospalax_galili
ENSCATG00000030302	APOBEC3H	100	85.083	ENSNLEG00000015218	-	86	85.083	Nomascus_leucogenys
ENSCATG00000030302	APOBEC3H	99	44.382	ENSOCUG00000023913	-	87	44.382	Oryctolagus_cuniculus
ENSCATG00000030302	APOBEC3H	99	50.556	ENSOARG00000016290	APOBEC3F	96	50.556	Ovis_aries
ENSCATG00000030302	APOBEC3H	100	81.818	ENSPPAG00000036522	APOBEC3H	100	81.818	Pan_paniscus
ENSCATG00000030302	APOBEC3H	89	37.671	ENSPPRG00000003675	-	81	38.750	Panthera_pardus
ENSCATG00000030302	APOBEC3H	99	53.039	ENSPPRG00000003941	-	93	52.717	Panthera_pardus
ENSCATG00000030302	APOBEC3H	99	53.039	ENSPTIG00000010283	-	93	52.717	Panthera_tigris_altaica
ENSCATG00000030302	APOBEC3H	100	81.818	ENSPTRG00000014390	APOBEC3H	100	81.818	Pan_troglodytes
ENSCATG00000030302	APOBEC3H	100	92.818	ENSPANG00000010774	APOBEC3H	99	92.157	Papio_anubis
ENSCATG00000030302	APOBEC3H	99	48.901	ENSPEMG00000000456	Apobec3	77	48.901	Peromyscus_maniculatus_bairdii
ENSCATG00000030302	APOBEC3H	100	85.635	ENSPPYG00000011834	-	86	85.635	Pongo_abelii
ENSCATG00000030302	APOBEC3H	98	44.693	ENSPCAG00000015655	-	98	44.693	Procavia_capensis
ENSCATG00000030302	APOBEC3H	71	37.795	ENSPVAG00000024267	-	93	37.795	Pteropus_vampyrus
ENSCATG00000030302	APOBEC3H	98	50.562	ENSPVAG00000009462	-	98	50.562	Pteropus_vampyrus
ENSCATG00000030302	APOBEC3H	71	38.583	ENSPVAG00000024161	-	93	38.583	Pteropus_vampyrus
ENSCATG00000030302	APOBEC3H	100	50.538	ENSRNOG00000016852	Apobec3	86	50.538	Rattus_norvegicus
ENSCATG00000030302	APOBEC3H	100	90.000	ENSRBIG00000029088	APOBEC3H	100	90.000	Rhinopithecus_bieti
ENSCATG00000030302	APOBEC3H	100	89.500	ENSRROG00000024699	APOBEC3H	100	89.500	Rhinopithecus_roxellana
ENSCATG00000030302	APOBEC3H	100	72.678	ENSSBOG00000030005	APOBEC3H	100	72.678	Saimiri_boliviensis_boliviensis
ENSCATG00000030302	APOBEC3H	99	52.778	ENSSSCG00000000091	APOBEC3B	83	52.778	Sus_scrofa
ENSCATG00000030302	APOBEC3H	95	52.907	ENSTBEG00000001532	-	98	52.907	Tupaia_belangeri
ENSCATG00000030302	APOBEC3H	99	51.111	ENSTTRG00000001266	-	99	51.111	Tursiops_truncatus
ENSCATG00000030302	APOBEC3H	99	50.267	ENSUAMG00000004427	-	83	50.267	Ursus_americanus
ENSCATG00000030302	APOBEC3H	99	52.778	ENSUMAG00000014435	-	91	52.778	Ursus_maritimus
ENSCATG00000030302	APOBEC3H	72	56.923	ENSVPAG00000011108	-	98	56.923	Vicugna_pacos