EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000030379 (Gene tree)
Gene ID: 105575355
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 62502 bases
Position: chrKQ012353.1:1262595-1325096
Accession: 105575355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000012482	RRM_1	PF00076.22	4.1e-09	1	1
ENSCATP00000012478	RRM_1	PF00076.22	4.8e-09	1	1
ENSCATP00000012416	RRM_1	PF00076.22	4.8e-09	1	1
ENSCATP00000012428	RRM_1	PF00076.22	4.9e-09	1	1
ENSCATP00000012439	RRM_1	PF00076.22	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000036612	SCAF4-205	3336	-	ENSCATP00000012482	1111 (aa)	-	A0A2K5LHU4
ENSCATT00000036569	SCAF4-203	3456	-	ENSCATP00000012439	1151 (aa)	-	A0A2K5LHL3
ENSCATT00000036545	SCAF4-201	4503	XM_012037046	ENSCATP00000012416	1150 (aa)	XP_011892436	A0A2K5LHL0
ENSCATT00000036558	SCAF4-202	4589	XM_012037048	ENSCATP00000012428	1136 (aa)	XP_011892438	A0A2K5LHH3
ENSCATT00000036608	SCAF4-204	3381	-	ENSCATP00000012478	1126 (aa)	-	A0A2K5LHM4

Gene Model

Click here to download ENSCATG00000030379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000030379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000030379	SCAF4	100	98.094	ENSG00000156304	SCAF4	100	98.094	Homo_sapiens
ENSCATG00000030379	SCAF4	79	52.620	ENSAPOG00000002946	scaf4a	55	59.091	Acanthochromis_polyacanthus
ENSCATG00000030379	SCAF4	51	60.949	ENSAPOG00000019615	scaf4b	63	60.949	Acanthochromis_polyacanthus
ENSCATG00000030379	SCAF4	74	93.012	ENSAMEG00000014987	SCAF4	96	93.245	Ailuropoda_melanoleuca
ENSCATG00000030379	SCAF4	79	53.476	ENSAOCG00000000615	scaf4a	55	58.788	Amphiprion_ocellaris
ENSCATG00000030379	SCAF4	78	53.568	ENSAPEG00000021229	scaf4a	55	58.636	Amphiprion_percula
ENSCATG00000030379	SCAF4	100	75.284	ENSAPLG00000002509	SCAF4	58	85.103	Anas_platyrhynchos
ENSCATG00000030379	SCAF4	96	69.555	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSCATG00000030379	SCAF4	100	97.405	ENSANAG00000037494	SCAF4	100	97.405	Aotus_nancymaae
ENSCATG00000030379	SCAF4	93	49.510	ENSAMXG00000008585	scaf4a	59	63.407	Astyanax_mexicanus
ENSCATG00000030379	SCAF4	100	92.201	ENSBTAG00000018855	SCAF4	100	91.421	Bos_taurus
ENSCATG00000030379	SCAF4	100	97.656	ENSCJAG00000008993	SCAF4	100	97.656	Callithrix_jacchus
ENSCATG00000030379	SCAF4	100	93.322	ENSCAFG00000008863	SCAF4	99	93.176	Canis_familiaris
ENSCATG00000030379	SCAF4	100	91.213	ENSCAFG00020026019	SCAF4	100	92.345	Canis_lupus_dingo
ENSCATG00000030379	SCAF4	100	91.537	ENSCHIG00000008385	SCAF4	100	90.933	Capra_hircus
ENSCATG00000030379	SCAF4	91	97.015	ENSTSYG00000011344	SCAF4	99	97.015	Carlito_syrichta
ENSCATG00000030379	SCAF4	100	89.397	ENSCPOG00000012443	SCAF4	100	89.310	Cavia_porcellus
ENSCATG00000030379	SCAF4	100	97.400	ENSCCAG00000033727	SCAF4	100	97.400	Cebus_capucinus
ENSCATG00000030379	SCAF4	100	91.493	ENSCLAG00000006298	SCAF4	100	91.667	Chinchilla_lanigera
ENSCATG00000030379	SCAF4	100	98.358	ENSCSAG00000009438	SCAF4	100	98.358	Chlorocebus_sabaeus
ENSCATG00000030379	SCAF4	100	98.785	ENSCANG00000029847	SCAF4	100	98.785	Colobus_angolensis_palliatus
ENSCATG00000030379	SCAF4	99	82.172	ENSCGRG00001020821	Scaf4	100	82.673	Cricetulus_griseus_chok1gshd
ENSCATG00000030379	SCAF4	99	81.864	ENSCGRG00000014360	Scaf4	99	85.973	Cricetulus_griseus_crigri
ENSCATG00000030379	SCAF4	58	55.822	ENSCSEG00000012808	-	62	61.244	Cynoglossus_semilaevis
ENSCATG00000030379	SCAF4	79	52.710	ENSCSEG00000019549	scaf4a	53	55.556	Cynoglossus_semilaevis
ENSCATG00000030379	SCAF4	100	90.191	ENSDNOG00000019014	SCAF4	94	90.104	Dasypus_novemcinctus
ENSCATG00000030379	SCAF4	91	93.333	ENSETEG00000000583	SCAF4	99	79.443	Echinops_telfairi
ENSCATG00000030379	SCAF4	100	93.576	ENSEASG00005007756	SCAF4	100	93.316	Equus_asinus_asinus
ENSCATG00000030379	SCAF4	100	93.576	ENSECAG00000014248	SCAF4	100	93.316	Equus_caballus
ENSCATG00000030379	SCAF4	58	52.703	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSCATG00000030379	SCAF4	100	92.481	ENSFCAG00000002228	SCAF4	100	92.567	Felis_catus
ENSCATG00000030379	SCAF4	100	88.927	ENSFDAG00000017780	SCAF4	100	88.498	Fukomys_damarensis
ENSCATG00000030379	SCAF4	100	76.740	ENSGALG00000033965	SCAF4	58	84.469	Gallus_gallus
ENSCATG00000030379	SCAF4	91	95.455	ENSGGOG00000015557	SCAF4	100	98.780	Gorilla_gorilla
ENSCATG00000030379	SCAF4	100	90.386	ENSHGLG00000010582	SCAF4	100	90.730	Heterocephalus_glaber_female
ENSCATG00000030379	SCAF4	100	90.269	ENSHGLG00100009441	SCAF4	100	90.617	Heterocephalus_glaber_male
ENSCATG00000030379	SCAF4	68	49.770	ENSIPUG00000011285	scaf4	63	62.707	Ictalurus_punctatus
ENSCATG00000030379	SCAF4	100	86.014	ENSSTOG00000004450	SCAF4	100	86.732	Ictidomys_tridecemlineatus
ENSCATG00000030379	SCAF4	100	88.772	ENSJJAG00000019447	Scaf4	99	88.724	Jaculus_jaculus
ENSCATG00000030379	SCAF4	98	60.574	ENSLACG00000013913	SCAF4	59	69.401	Latimeria_chalumnae
ENSCATG00000030379	SCAF4	95	57.578	ENSLOCG00000009162	scaf4a	58	68.380	Lepisosteus_oculatus
ENSCATG00000030379	SCAF4	100	92.982	ENSLAFG00000010710	SCAF4	100	91.543	Loxodonta_africana
ENSCATG00000030379	SCAF4	100	98.963	ENSMFAG00000037668	SCAF4	100	98.963	Macaca_fascicularis
ENSCATG00000030379	SCAF4	100	98.876	ENSMMUG00000001712	SCAF4	100	98.876	Macaca_mulatta
ENSCATG00000030379	SCAF4	100	99.307	ENSMNEG00000032966	SCAF4	100	99.307	Macaca_nemestrina
ENSCATG00000030379	SCAF4	100	99.298	ENSMLEG00000039674	SCAF4	100	99.301	Mandrillus_leucophaeus
ENSCATG00000030379	SCAF4	100	76.003	ENSMGAG00000014515	SCAF4	58	84.628	Meleagris_gallopavo
ENSCATG00000030379	SCAF4	100	87.982	ENSMAUG00000013307	Scaf4	100	87.895	Mesocricetus_auratus
ENSCATG00000030379	SCAF4	100	96.441	ENSMICG00000005256	SCAF4	100	96.441	Microcebus_murinus
ENSCATG00000030379	SCAF4	100	85.727	ENSMOCG00000012087	Scaf4	95	91.108	Microtus_ochrogaster
ENSCATG00000030379	SCAF4	99	85.561	ENSMODG00000021040	SCAF4	99	84.691	Monodelphis_domestica
ENSCATG00000030379	SCAF4	100	83.537	MGP_CAROLIEiJ_G0020944	Scaf4	100	86.410	Mus_caroli
ENSCATG00000030379	SCAF4	100	83.293	ENSMUSG00000022983	Scaf4	95	89.460	Mus_musculus
ENSCATG00000030379	SCAF4	100	82.711	MGP_PahariEiJ_G0016649	Scaf4	100	85.897	Mus_pahari
ENSCATG00000030379	SCAF4	100	83.961	MGP_SPRETEiJ_G0021850	Scaf4	100	85.663	Mus_spretus
ENSCATG00000030379	SCAF4	100	92.826	ENSMPUG00000001078	SCAF4	100	91.876	Mustela_putorius_furo
ENSCATG00000030379	SCAF4	99	77.565	ENSMLUG00000011472	SCAF4	79	83.315	Myotis_lucifugus
ENSCATG00000030379	SCAF4	100	90.289	ENSNGAG00000005214	Scaf4	99	90.639	Nannospalax_galili
ENSCATG00000030379	SCAF4	100	98.092	ENSNLEG00000003569	SCAF4	100	98.092	Nomascus_leucogenys
ENSCATG00000030379	SCAF4	82	95.652	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSCATG00000030379	SCAF4	100	89.406	ENSODEG00000002718	SCAF4	100	88.085	Octodon_degus
ENSCATG00000030379	SCAF4	70	58.718	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSCATG00000030379	SCAF4	100	89.196	ENSOCUG00000008336	SCAF4	100	89.023	Oryctolagus_cuniculus
ENSCATG00000030379	SCAF4	64	50.162	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSCATG00000030379	SCAF4	100	94.737	ENSOGAG00000014653	SCAF4	94	95.113	Otolemur_garnettii
ENSCATG00000030379	SCAF4	100	90.941	ENSOARG00000013894	SCAF4	99	90.052	Ovis_aries
ENSCATG00000030379	SCAF4	100	98.094	ENSPPAG00000028535	SCAF4	100	98.094	Pan_paniscus
ENSCATG00000030379	SCAF4	100	92.550	ENSPPRG00000000635	SCAF4	100	92.751	Panthera_pardus
ENSCATG00000030379	SCAF4	100	90.334	ENSPTIG00000021578	SCAF4	99	88.978	Panthera_tigris_altaica
ENSCATG00000030379	SCAF4	100	98.094	ENSPTRG00000013848	SCAF4	100	98.094	Pan_troglodytes
ENSCATG00000030379	SCAF4	100	99.220	ENSPANG00000017332	SCAF4	100	99.220	Papio_anubis
ENSCATG00000030379	SCAF4	64	64.248	ENSPKIG00000022408	scaf4a	90	66.667	Paramormyrops_kingsleyae
ENSCATG00000030379	SCAF4	99	77.649	ENSPSIG00000014242	SCAF4	57	86.378	Pelodiscus_sinensis
ENSCATG00000030379	SCAF4	60	88.660	ENSPCIG00000028183	SCAF4	91	82.570	Phascolarctos_cinereus
ENSCATG00000030379	SCAF4	100	98.267	ENSPPYG00000011355	SCAF4	100	98.267	Pongo_abelii
ENSCATG00000030379	SCAF4	94	94.118	ENSPCAG00000009998	SCAF4	92	94.757	Procavia_capensis
ENSCATG00000030379	SCAF4	100	95.920	ENSPCOG00000018710	SCAF4	100	95.833	Propithecus_coquereli
ENSCATG00000030379	SCAF4	100	92.622	ENSPVAG00000005220	SCAF4	100	92.188	Pteropus_vampyrus
ENSCATG00000030379	SCAF4	76	57.480	ENSPNAG00000016892	scaf4a	60	63.323	Pygocentrus_nattereri
ENSCATG00000030379	SCAF4	98	85.600	ENSRNOG00000002104	Scaf4	98	85.897	Rattus_norvegicus
ENSCATG00000030379	SCAF4	100	96.394	ENSRBIG00000040007	SCAF4	100	96.394	Rhinopithecus_bieti
ENSCATG00000030379	SCAF4	100	98.872	ENSRROG00000029488	SCAF4	100	98.872	Rhinopithecus_roxellana
ENSCATG00000030379	SCAF4	99	85.625	ENSSHAG00000001581	SCAF4	99	84.305	Sarcophilus_harrisii
ENSCATG00000030379	SCAF4	88	47.328	ENSSFOG00015006338	scaf4a	54	59.847	Scleropages_formosus
ENSCATG00000030379	SCAF4	65	56.690	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSCATG00000030379	SCAF4	79	53.568	ENSSMAG00000017901	scaf4a	53	53.461	Scophthalmus_maximus
ENSCATG00000030379	SCAF4	57	61.290	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSCATG00000030379	SCAF4	57	61.290	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSCATG00000030379	SCAF4	100	90.009	ENSSARG00000009994	SCAF4	100	88.918	Sorex_araneus
ENSCATG00000030379	SCAF4	100	90.525	ENSSSCG00000021023	SCAF4	100	90.525	Sus_scrofa
ENSCATG00000030379	SCAF4	74	72.246	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSCATG00000030379	SCAF4	51	58.451	ENSTRUG00000009536	-	65	57.818	Takifugu_rubripes
ENSCATG00000030379	SCAF4	100	92.004	ENSTTRG00000010963	SCAF4	100	91.681	Tursiops_truncatus
ENSCATG00000030379	SCAF4	100	91.233	ENSUAMG00000008860	SCAF4	100	91.059	Ursus_americanus
ENSCATG00000030379	SCAF4	99	93.543	ENSUMAG00000016962	SCAF4	100	93.543	Ursus_maritimus
ENSCATG00000030379	SCAF4	100	93.322	ENSVVUG00000002953	SCAF4	100	93.146	Vulpes_vulpes
ENSCATG00000030379	SCAF4	99	56.203	ENSXETG00000007351	scaf4	75	66.324	Xenopus_tropicalis