EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000030934 (Gene tree)
Gene ID: 105582328
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: copine 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 37887 bases
Position: chrKQ012663.1:29837511-29875397
Accession: 105582328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000013692	RRM_1	PF00076.22	1.8e-30	1	3
ENSCATP00000013692	RRM_1	PF00076.22	1.8e-30	2	3
ENSCATP00000013692	RRM_1	PF00076.22	1.8e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000037828	RBM12-205	1683	-	ENSCATP00000013687	560 (aa)	-	A0A2K5LL74
ENSCATT00000037825	RBM12-204	1659	-	ENSCATP00000013684	552 (aa)	-	A0A2K5LL46
ENSCATT00000037833	RBM12-206	6674	XM_012052686	ENSCATP00000013692	954 (aa)	XP_011908076	A0A2K5LL80
ENSCATT00000037814	RBM12-202	2200	XM_012052692	ENSCATP00000013673	542 (aa)	XP_011908082	A0A2K5LL83
ENSCATT00000037820	RBM12-203	1785	-	ENSCATP00000013679	594 (aa)	-	A0A2K5LL40
ENSCATT00000037808	RBM12-201	2010	XM_012052693	ENSCATP00000013667	574 (aa)	XP_011908083	A0A2K5LL58

Gene Model

Click here to download ENSCATG00000030934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000030934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000030934	RBM12	54	72.414	ENSCATG00000030769	RBM12B	58	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000030934	RBM12	98	99.464	ENSG00000244462	RBM12	100	99.464	Homo_sapiens
ENSCATG00000030934	RBM12	98	95.923	ENSAMEG00000019189	RBM12	100	95.923	Ailuropoda_melanoleuca
ENSCATG00000030934	RBM12	99	78.398	ENSACAG00000006330	RBM12	99	78.398	Anolis_carolinensis
ENSCATG00000030934	RBM12	100	98.428	ENSANAG00000032596	RBM12	100	98.428	Aotus_nancymaae
ENSCATG00000030934	RBM12	98	91.954	ENSBTAG00000044015	RBM12	100	91.327	Bos_taurus
ENSCATG00000030934	RBM12	100	95.178	ENSCAFG00000008256	RBM12	100	94.444	Canis_familiaris
ENSCATG00000030934	RBM12	98	94.528	ENSCAFG00020005650	RBM12	100	94.313	Canis_lupus_dingo
ENSCATG00000030934	RBM12	98	94.206	ENSCHIG00000024592	RBM12	100	93.455	Capra_hircus
ENSCATG00000030934	RBM12	100	94.549	ENSTSYG00000030563	RBM12	100	94.654	Carlito_syrichta
ENSCATG00000030934	RBM12	82	86.761	ENSCAPG00000006176	RBM12	80	93.438	Cavia_aperea
ENSCATG00000030934	RBM12	98	87.588	ENSCPOG00000035170	RBM12	100	93.484	Cavia_porcellus
ENSCATG00000030934	RBM12	94	94.731	ENSCCAG00000036056	-	98	94.731	Cebus_capucinus
ENSCATG00000030934	RBM12	91	89.418	ENSCCAG00000035899	-	100	76.288	Cebus_capucinus
ENSCATG00000030934	RBM12	98	93.348	ENSCLAG00000017230	RBM12	100	93.348	Chinchilla_lanigera
ENSCATG00000030934	RBM12	100	99.476	ENSCANG00000030552	RBM12	100	99.476	Colobus_angolensis_palliatus
ENSCATG00000030934	RBM12	98	81.100	ENSCGRG00001021144	Rbm12	100	86.231	Cricetulus_griseus_chok1gshd
ENSCATG00000030934	RBM12	98	81.100	ENSCGRG00000012719	Rbm12	100	86.231	Cricetulus_griseus_crigri
ENSCATG00000030934	RBM12	73	86.591	ENSDORG00000000606	-	100	81.571	Dipodomys_ordii
ENSCATG00000030934	RBM12	98	93.910	ENSDORG00000028509	-	100	93.269	Dipodomys_ordii
ENSCATG00000030934	RBM12	52	85.870	ENSEBUG00000016806	rbm12	89	65.649	Eptatretus_burgeri
ENSCATG00000030934	RBM12	98	94.850	ENSECAG00000021997	RBM12	100	93.991	Equus_caballus
ENSCATG00000030934	RBM12	98	93.991	ENSFDAG00000014663	RBM12	100	93.562	Fukomys_damarensis
ENSCATG00000030934	RBM12	98	79.100	ENSGALG00000030253	RBM12	100	79.528	Gallus_gallus
ENSCATG00000030934	RBM12	100	99.476	ENSGGOG00000028500	RBM12	100	99.476	Gorilla_gorilla
ENSCATG00000030934	RBM12	98	94.313	ENSHGLG00000013208	RBM12	100	93.884	Heterocephalus_glaber_female
ENSCATG00000030934	RBM12	88	97.335	ENSHGLG00100019158	RBM12	90	97.335	Heterocephalus_glaber_male
ENSCATG00000030934	RBM12	98	90.231	ENSSTOG00000019739	RBM12	100	90.021	Ictidomys_tridecemlineatus
ENSCATG00000030934	RBM12	98	93.884	ENSLAFG00000010341	RBM12	100	93.455	Loxodonta_africana
ENSCATG00000030934	RBM12	100	99.790	ENSMFAG00000032583	RBM12	100	99.790	Macaca_fascicularis
ENSCATG00000030934	RBM12	98	99.893	ENSMMUG00000020960	CPNE1	100	99.893	Macaca_mulatta
ENSCATG00000030934	RBM12	100	99.895	ENSMNEG00000045365	RBM12	100	99.895	Macaca_nemestrina
ENSCATG00000030934	RBM12	100	99.895	ENSMLEG00000032492	RBM12	100	99.895	Mandrillus_leucophaeus
ENSCATG00000030934	RBM12	99	78.000	ENSMGAG00000001502	RBM12	100	79.370	Meleagris_gallopavo
ENSCATG00000030934	RBM12	98	86.633	ENSMAUG00000012800	Rbm12	100	87.236	Mesocricetus_auratus
ENSCATG00000030934	RBM12	100	93.291	ENSMICG00000032761	-	100	93.816	Microcebus_murinus
ENSCATG00000030934	RBM12	98	85.300	ENSMICG00000029540	-	72	84.460	Microcebus_murinus
ENSCATG00000030934	RBM12	98	80.020	ENSMOCG00000012950	Rbm12	100	92.351	Microtus_ochrogaster
ENSCATG00000030934	RBM12	100	84.906	ENSMODG00000001591	RBM12	100	84.696	Monodelphis_domestica
ENSCATG00000030934	RBM12	98	77.483	MGP_CAROLIEiJ_G0024551	Rbm12	98	92.867	Mus_caroli
ENSCATG00000030934	RBM12	98	85.256	ENSMUSG00000089824	Rbm12	100	92.725	Mus_musculus
ENSCATG00000030934	RBM12	98	78.075	MGP_PahariEiJ_G0025996	Rbm12	100	92.867	Mus_pahari
ENSCATG00000030934	RBM12	71	93.971	MGP_SPRETEiJ_G0025473	Rbm12	99	92.582	Mus_spretus
ENSCATG00000030934	RBM12	98	94.635	ENSMPUG00000017789	-	100	93.884	Mustela_putorius_furo
ENSCATG00000030934	RBM12	100	94.130	ENSMLUG00000011217	RBM12	100	93.396	Myotis_lucifugus
ENSCATG00000030934	RBM12	98	80.603	ENSNGAG00000015846	Rbm12	100	86.560	Nannospalax_galili
ENSCATG00000030934	RBM12	100	99.161	ENSNLEG00000010268	RBM12	100	99.161	Nomascus_leucogenys
ENSCATG00000030934	RBM12	98	84.549	ENSMEUG00000007621	RBM12	100	84.335	Notamacropus_eugenii
ENSCATG00000030934	RBM12	98	92.038	ENSOPRG00000005687	RBM12	100	91.614	Ochotona_princeps
ENSCATG00000030934	RBM12	84	89.277	ENSODEG00000013870	RBM12	100	86.544	Octodon_degus
ENSCATG00000030934	RBM12	100	99.476	ENSPPAG00000040719	RBM12	100	99.476	Pan_paniscus
ENSCATG00000030934	RBM12	100	99.476	ENSPTRG00000013446	RBM12	100	99.476	Pan_troglodytes
ENSCATG00000030934	RBM12	100	99.476	ENSPTRG00000040708	-	100	99.476	Pan_troglodytes
ENSCATG00000030934	RBM12	100	99.895	ENSPANG00000020003	CPNE1	100	99.895	Papio_anubis
ENSCATG00000030934	RBM12	88	85.821	ENSPSIG00000007369	RBM12	92	93.103	Pelodiscus_sinensis
ENSCATG00000030934	RBM12	98	79.761	ENSPEMG00000017769	Rbm12	100	81.548	Peromyscus_maniculatus_bairdii
ENSCATG00000030934	RBM12	58	78.571	ENSPFOG00000023551	rbm12	93	78.873	Poecilia_formosa
ENSCATG00000030934	RBM12	98	99.358	ENSPPYG00000010960	RBM12	100	99.358	Pongo_abelii
ENSCATG00000030934	RBM12	98	92.275	ENSPCAG00000008653	RBM12	100	91.524	Procavia_capensis
ENSCATG00000030934	RBM12	100	96.122	ENSPCOG00000023724	RBM12	100	96.122	Propithecus_coquereli
ENSCATG00000030934	RBM12	81	94.026	ENSPVAG00000014937	RBM12	100	93.562	Pteropus_vampyrus
ENSCATG00000030934	RBM12	73	92.297	ENSRNOG00000049913	LOC100910990	97	92.297	Rattus_norvegicus
ENSCATG00000030934	RBM12	73	92.297	ENSRNOG00000019723	Rbm12	97	92.297	Rattus_norvegicus
ENSCATG00000030934	RBM12	100	99.686	ENSRBIG00000042965	RBM12	100	99.686	Rhinopithecus_bieti
ENSCATG00000030934	RBM12	100	99.686	ENSRROG00000037485	RBM12	100	99.686	Rhinopithecus_roxellana
ENSCATG00000030934	RBM12	100	98.323	ENSSBOG00000027633	RBM12	100	98.323	Saimiri_boliviensis_boliviensis
ENSCATG00000030934	RBM12	98	85.300	ENSSHAG00000018585	RBM12	100	85.086	Sarcophilus_harrisii
ENSCATG00000030934	RBM12	98	94.877	ENSSSCG00000036156	RBM12	100	94.130	Sus_scrofa
ENSCATG00000030934	RBM12	98	79.721	ENSTGUG00000003002	RBM12	100	79.185	Taeniopygia_guttata
ENSCATG00000030934	RBM12	98	94.528	ENSTTRG00000017035	RBM12	100	93.777	Tursiops_truncatus
ENSCATG00000030934	RBM12	98	93.455	ENSUAMG00000010430	RBM12	100	94.206	Ursus_americanus
ENSCATG00000030934	RBM12	86	100.000	ENSVPAG00000003812	RBM12	87	100.000	Vicugna_pacos
ENSCATG00000030934	RBM12	98	60.127	ENSXETG00000033541	RBM12	74	65.471	Xenopus_tropicalis