EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000030987 (Gene tree)
Gene ID: 105589480
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 128790 bases
Position: chrKQ009886.1:5638169-5766958
Accession: 105589480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000013793	ResIII	PF04851.15	3.9e-11	1	1
ENSCATP00000013793	DEAD	PF00270.29	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000037935	HFM1-201	5156	XM_012068004	ENSCATP00000013793	1435 (aa)	XP_011923394	A0A2K5LLL1

Gene Model

Click here to download ENSCATG00000030987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000030987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000030987	HFM1	51	35.022	ENSCATG00000011281	ASCC3	62	35.022
ENSCATG00000030987	HFM1	58	32.234	ENSCATG00000015790	SNRNP200	75	32.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000030987	HFM1	100	96.864	ENSG00000162669	HFM1	100	96.864	Homo_sapiens
ENSCATG00000030987	HFM1	64	64.726	ENSAPOG00000005304	hfm1	100	64.726	Acanthochromis_polyacanthus
ENSCATG00000030987	HFM1	100	85.823	ENSAMEG00000000432	HFM1	100	85.823	Ailuropoda_melanoleuca
ENSCATG00000030987	HFM1	70	60.078	ENSACIG00000021553	hfm1	91	60.078	Amphilophus_citrinellus
ENSCATG00000030987	HFM1	64	65.461	ENSAOCG00000022839	hfm1	100	65.461	Amphiprion_ocellaris
ENSCATG00000030987	HFM1	64	64.994	ENSAPEG00000014316	hfm1	100	64.994	Amphiprion_percula
ENSCATG00000030987	HFM1	70	61.779	ENSATEG00000019181	hfm1	84	60.825	Anabas_testudineus
ENSCATG00000030987	HFM1	100	60.082	ENSAPLG00000013639	HFM1	100	60.082	Anas_platyrhynchos
ENSCATG00000030987	HFM1	100	91.441	ENSANAG00000029513	HFM1	100	91.441	Aotus_nancymaae
ENSCATG00000030987	HFM1	65	63.519	ENSACLG00000009033	hfm1	97	65.191	Astatotilapia_calliptera
ENSCATG00000030987	HFM1	93	51.689	ENSAMXG00000006108	hfm1	90	51.542	Astyanax_mexicanus
ENSCATG00000030987	HFM1	100	84.792	ENSBTAG00000020856	HFM1	100	84.792	Bos_taurus
ENSCATG00000030987	HFM1	100	93.240	ENSCJAG00000001843	HFM1	100	93.240	Callithrix_jacchus
ENSCATG00000030987	HFM1	100	85.407	ENSCAFG00000020187	HFM1	100	85.407	Canis_familiaris
ENSCATG00000030987	HFM1	100	86.866	ENSTSYG00000014250	HFM1	100	86.866	Carlito_syrichta
ENSCATG00000030987	HFM1	99	78.427	ENSCPOG00000007421	HFM1	99	78.427	Cavia_porcellus
ENSCATG00000030987	HFM1	100	93.101	ENSCCAG00000033206	HFM1	100	93.101	Cebus_capucinus
ENSCATG00000030987	HFM1	100	80.634	ENSCLAG00000005173	HFM1	99	80.634	Chinchilla_lanigera
ENSCATG00000030987	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSCATG00000030987	HFM1	100	73.462	ENSCGRG00001016995	Hfm1	100	73.462	Cricetulus_griseus_chok1gshd
ENSCATG00000030987	HFM1	100	77.623	ENSCGRG00000017181	Hfm1	100	77.623	Cricetulus_griseus_crigri
ENSCATG00000030987	HFM1	70	59.597	ENSCSEG00000017659	hfm1	93	59.558	Cynoglossus_semilaevis
ENSCATG00000030987	HFM1	50	69.371	ENSCVAG00000005075	hfm1	86	69.371	Cyprinodon_variegatus
ENSCATG00000030987	HFM1	79	53.846	ENSDARG00000104288	hfm1	99	53.846	Danio_rerio
ENSCATG00000030987	HFM1	100	80.863	ENSDNOG00000004776	HFM1	100	80.863	Dasypus_novemcinctus
ENSCATG00000030987	HFM1	100	77.679	ENSDORG00000014661	Hfm1	100	77.679	Dipodomys_ordii
ENSCATG00000030987	HFM1	70	84.995	ENSEASG00005015424	HFM1	98	85.217	Equus_asinus_asinus
ENSCATG00000030987	HFM1	100	84.175	ENSECAG00000024039	HFM1	100	84.175	Equus_caballus
ENSCATG00000030987	HFM1	64	66.165	ENSELUG00000018944	hfm1	99	66.165	Esox_lucius
ENSCATG00000030987	HFM1	100	85.556	ENSFCAG00000029116	HFM1	100	85.556	Felis_catus
ENSCATG00000030987	HFM1	100	59.849	ENSFALG00000001781	HFM1	100	60.263	Ficedula_albicollis
ENSCATG00000030987	HFM1	100	78.912	ENSFDAG00000020816	HFM1	100	78.912	Fukomys_damarensis
ENSCATG00000030987	HFM1	66	59.938	ENSGMOG00000017436	hfm1	100	59.938	Gadus_morhua
ENSCATG00000030987	HFM1	71	61.419	ENSGAFG00000018093	hfm1	92	66.829	Gambusia_affinis
ENSCATG00000030987	HFM1	66	61.920	ENSGACG00000015686	hfm1	100	61.920	Gasterosteus_aculeatus
ENSCATG00000030987	HFM1	100	96.516	ENSGGOG00000038524	HFM1	100	96.516	Gorilla_gorilla
ENSCATG00000030987	HFM1	65	64.592	ENSHBUG00000007309	hfm1	96	59.676	Haplochromis_burtoni
ENSCATG00000030987	HFM1	57	63.848	ENSHCOG00000019632	hfm1	97	63.848	Hippocampus_comes
ENSCATG00000030987	HFM1	66	63.799	ENSIPUG00000017020	hfm1	92	65.119	Ictalurus_punctatus
ENSCATG00000030987	HFM1	100	77.801	ENSJJAG00000017198	Hfm1	100	77.801	Jaculus_jaculus
ENSCATG00000030987	HFM1	62	63.374	ENSKMAG00000002282	hfm1	90	63.374	Kryptolebias_marmoratus
ENSCATG00000030987	HFM1	70	60.609	ENSLBEG00000006759	hfm1	96	65.673	Labrus_bergylta
ENSCATG00000030987	HFM1	66	70.145	ENSLACG00000010698	HFM1	99	66.161	Latimeria_chalumnae
ENSCATG00000030987	HFM1	74	62.710	ENSLOCG00000004931	hfm1	99	62.804	Lepisosteus_oculatus
ENSCATG00000030987	HFM1	52	90.175	ENSLAFG00000015903	-	99	90.175	Loxodonta_africana
ENSCATG00000030987	HFM1	100	95.836	ENSMFAG00000003649	HFM1	100	95.836	Macaca_fascicularis
ENSCATG00000030987	HFM1	100	98.815	ENSMMUG00000006819	HFM1	100	98.815	Macaca_mulatta
ENSCATG00000030987	HFM1	54	70.603	ENSMAMG00000004623	hfm1	97	71.357	Mastacembelus_armatus
ENSCATG00000030987	HFM1	65	63.519	ENSMZEG00005004679	hfm1	97	65.191	Maylandia_zebra
ENSCATG00000030987	HFM1	54	77.806	ENSMGAG00000008437	HFM1	98	77.806	Meleagris_gallopavo
ENSCATG00000030987	HFM1	100	77.569	ENSMAUG00000018858	Hfm1	100	77.569	Mesocricetus_auratus
ENSCATG00000030987	HFM1	100	87.769	ENSMICG00000037935	HFM1	100	87.769	Microcebus_murinus
ENSCATG00000030987	HFM1	100	75.452	ENSMOCG00000014812	Hfm1	100	75.452	Microtus_ochrogaster
ENSCATG00000030987	HFM1	62	63.565	ENSMMOG00000006148	hfm1	93	64.727	Mola_mola
ENSCATG00000030987	HFM1	65	63.859	ENSMALG00000002401	hfm1	100	66.546	Monopterus_albus
ENSCATG00000030987	HFM1	96	71.649	MGP_CAROLIEiJ_G0027496	Hfm1	100	71.649	Mus_caroli
ENSCATG00000030987	HFM1	100	76.704	ENSMUSG00000043410	Hfm1	100	76.704	Mus_musculus
ENSCATG00000030987	HFM1	100	76.495	MGP_PahariEiJ_G0017268	Hfm1	100	76.495	Mus_pahari
ENSCATG00000030987	HFM1	100	76.356	MGP_SPRETEiJ_G0028495	Hfm1	100	76.356	Mus_spretus
ENSCATG00000030987	HFM1	100	81.751	ENSMPUG00000004594	HFM1	100	81.751	Mustela_putorius_furo
ENSCATG00000030987	HFM1	100	82.998	ENSMLUG00000010200	HFM1	100	82.998	Myotis_lucifugus
ENSCATG00000030987	HFM1	65	60.343	ENSNBRG00000002910	hfm1	97	65.455	Neolamprologus_brichardi
ENSCATG00000030987	HFM1	100	91.997	ENSNLEG00000010285	HFM1	100	91.997	Nomascus_leucogenys
ENSCATG00000030987	HFM1	84	66.092	ENSMEUG00000015788	HFM1	84	66.092	Notamacropus_eugenii
ENSCATG00000030987	HFM1	84	78.261	ENSOPRG00000013916	HFM1	84	78.261	Ochotona_princeps
ENSCATG00000030987	HFM1	70	62.488	ENSONIG00000010590	hfm1	99	62.343	Oreochromis_niloticus
ENSCATG00000030987	HFM1	57	65.806	ENSORLG00000026844	hfm1	99	65.806	Oryzias_latipes
ENSCATG00000030987	HFM1	85	49.239	ENSORLG00020002951	hfm1	96	49.275	Oryzias_latipes_hni
ENSCATG00000030987	HFM1	85	54.618	ENSOMEG00000016474	hfm1	83	54.618	Oryzias_melastigma
ENSCATG00000030987	HFM1	85	88.436	ENSOGAG00000032369	HFM1	100	88.436	Otolemur_garnettii
ENSCATG00000030987	HFM1	100	84.872	ENSOARG00000015812	HFM1	100	84.872	Ovis_aries
ENSCATG00000030987	HFM1	92	97.281	ENSPPAG00000024582	HFM1	100	97.281	Pan_paniscus
ENSCATG00000030987	HFM1	100	85.486	ENSPPRG00000003270	HFM1	100	85.486	Panthera_pardus
ENSCATG00000030987	HFM1	100	85.417	ENSPTIG00000018881	HFM1	100	85.417	Panthera_tigris_altaica
ENSCATG00000030987	HFM1	100	96.655	ENSPTRG00000000948	HFM1	100	96.655	Pan_troglodytes
ENSCATG00000030987	HFM1	100	99.094	ENSPANG00000009838	HFM1	100	99.094	Papio_anubis
ENSCATG00000030987	HFM1	62	67.114	ENSPKIG00000003810	hfm1	95	67.758	Paramormyrops_kingsleyae
ENSCATG00000030987	HFM1	58	65.901	ENSPMGG00000011059	hfm1	100	65.901	Periophthalmus_magnuspinnatus
ENSCATG00000030987	HFM1	100	79.624	ENSPEMG00000022852	Hfm1	100	79.624	Peromyscus_maniculatus_bairdii
ENSCATG00000030987	HFM1	100	67.046	ENSPCIG00000014233	HFM1	100	67.046	Phascolarctos_cinereus
ENSCATG00000030987	HFM1	70	61.751	ENSPFOG00000017194	hfm1	99	61.751	Poecilia_formosa
ENSCATG00000030987	HFM1	71	63.840	ENSPLAG00000000571	hfm1	92	63.840	Poecilia_latipinna
ENSCATG00000030987	HFM1	71	63.919	ENSPMEG00000019475	hfm1	92	63.919	Poecilia_mexicana
ENSCATG00000030987	HFM1	70	62.919	ENSPREG00000007803	hfm1	92	66.423	Poecilia_reticulata
ENSCATG00000030987	HFM1	100	96.376	ENSPPYG00000001163	HFM1	100	96.376	Pongo_abelii
ENSCATG00000030987	HFM1	74	83.051	ENSPCAG00000004289	-	74	83.051	Procavia_capensis
ENSCATG00000030987	HFM1	100	77.592	ENSPVAG00000009713	HFM1	100	77.592	Pteropus_vampyrus
ENSCATG00000030987	HFM1	65	63.305	ENSPNYG00000001795	hfm1	97	65.072	Pundamilia_nyererei
ENSCATG00000030987	HFM1	59	67.023	ENSPNAG00000010865	hfm1	83	67.023	Pygocentrus_nattereri
ENSCATG00000030987	HFM1	100	75.382	ENSRNOG00000023299	Hfm1	100	75.382	Rattus_norvegicus
ENSCATG00000030987	HFM1	100	97.979	ENSRROG00000045569	HFM1	100	97.979	Rhinopithecus_roxellana
ENSCATG00000030987	HFM1	100	90.801	ENSSBOG00000027456	HFM1	100	90.801	Saimiri_boliviensis_boliviensis
ENSCATG00000030987	HFM1	60	71.445	ENSSHAG00000014616	-	98	71.445	Sarcophilus_harrisii
ENSCATG00000030987	HFM1	86	56.701	ENSSFOG00015020129	hfm1	83	56.701	Scleropages_formosus
ENSCATG00000030987	HFM1	62	64.693	ENSSMAG00000006907	hfm1	87	64.693	Scophthalmus_maximus
ENSCATG00000030987	HFM1	62	65.659	ENSSDUG00000011424	hfm1	100	65.659	Seriola_dumerili
ENSCATG00000030987	HFM1	63	65.783	ENSSLDG00000016386	hfm1	100	65.783	Seriola_lalandi_dorsalis
ENSCATG00000030987	HFM1	62	66.307	ENSSPAG00000001023	hfm1	100	66.307	Stegastes_partitus
ENSCATG00000030987	HFM1	100	81.414	ENSSSCG00000006912	HFM1	100	81.414	Sus_scrofa
ENSCATG00000030987	HFM1	66	75.235	ENSTGUG00000006172	HFM1	100	75.235	Taeniopygia_guttata
ENSCATG00000030987	HFM1	100	81.250	ENSTTRG00000013933	HFM1	100	81.250	Tursiops_truncatus
ENSCATG00000030987	HFM1	93	83.294	ENSVPAG00000011331	HFM1	93	83.294	Vicugna_pacos
ENSCATG00000030987	HFM1	71	82.575	ENSVVUG00000020760	HFM1	99	82.575	Vulpes_vulpes
ENSCATG00000030987	HFM1	59	66.231	ENSXMAG00000004178	hfm1	93	66.231	Xiphophorus_maculatus