EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000031303 (Gene tree)
Gene ID: 105594974
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 29742 bases
Position: chrKQ010561.1:22601204-22630945
Accession: 105594974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000014798	PWI	PF01480.17	9.3e-30	1	1
ENSCATP00000014567	PWI	PF01480.17	1e-29	1	1
ENSCATP00000014771	PWI	PF01480.17	1e-29	1	1
ENSCATP00000014585	PWI	PF01480.17	1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000038714	SRRM1-201	3922	XM_012080122	ENSCATP00000014567	904 (aa)	XP_011935512	A0A2K5LNP5
ENSCATT00000038946	SRRM1-205	2451	-	ENSCATP00000014798	816 (aa)	-	A0A2K5LPF6
ENSCATT00000038732	SRRM1-202	3960	XM_012080117	ENSCATP00000014585	917 (aa)	XP_011935507	A0A2K5LNP8
ENSCATT00000038919	SRRM1-204	2754	-	ENSCATP00000014771	917 (aa)	-	A0A2K5LP99
ENSCATT00000038901	SRRM1-203	3979	-	ENSCATP00000014753	80 (aa)	-	A0A2K5LPB4

Gene Model

Click here to download ENSCATG00000031303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000031303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000031303	SRRM1	100	99.558	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSCATG00000031303	SRRM1	100	97.495	ENSAMEG00000010075	SRRM1	100	97.495	Ailuropoda_melanoleuca
ENSCATG00000031303	SRRM1	100	98.783	ENSANAG00000035606	SRRM1	100	98.783	Aotus_nancymaae
ENSCATG00000031303	SRRM1	100	97.712	ENSCJAG00000020822	SRRM1	100	98.051	Callithrix_jacchus
ENSCATG00000031303	SRRM1	96	89.245	ENSCAFG00020000003	-	98	89.322	Canis_lupus_dingo
ENSCATG00000031303	SRRM1	100	98.009	ENSCAFG00020020948	SRRM1	100	98.009	Canis_lupus_dingo
ENSCATG00000031303	SRRM1	100	98.009	ENSTSYG00000006782	SRRM1	100	98.009	Carlito_syrichta
ENSCATG00000031303	SRRM1	99	94.426	ENSCAPG00000011473	SRRM1	100	94.426	Cavia_aperea
ENSCATG00000031303	SRRM1	59	94.620	ENSCPOG00000015594	SRRM1	59	94.620	Cavia_porcellus
ENSCATG00000031303	SRRM1	100	98.562	ENSCCAG00000029474	SRRM1	100	98.562	Cebus_capucinus
ENSCATG00000031303	SRRM1	74	97.222	ENSCHOG00000000027	SRRM1	73	97.222	Choloepus_hoffmanni
ENSCATG00000031303	SRRM1	100	99.632	ENSCANG00000028271	SRRM1	100	99.632	Colobus_angolensis_palliatus
ENSCATG00000031303	SRRM1	96	93.439	ENSDNOG00000049141	SRRM1	98	93.439	Dasypus_novemcinctus
ENSCATG00000031303	SRRM1	100	96.841	ENSEASG00005004270	SRRM1	100	96.841	Equus_asinus_asinus
ENSCATG00000031303	SRRM1	100	97.124	ENSECAG00000026981	SRRM1	100	97.124	Equus_caballus
ENSCATG00000031303	SRRM1	100	98.119	ENSFCAG00000000678	-	100	98.119	Felis_catus
ENSCATG00000031303	SRRM1	100	99.632	ENSGGOG00000005209	SRRM1	100	99.632	Gorilla_gorilla
ENSCATG00000031303	SRRM1	100	98.119	ENSSTOG00000014640	SRRM1	100	98.119	Ictidomys_tridecemlineatus
ENSCATG00000031303	SRRM1	100	94.592	ENSLAFG00000013830	SRRM1	60	92.895	Loxodonta_africana
ENSCATG00000031303	SRRM1	100	100.000	ENSMFAG00000025726	SRRM1	100	100.000	Macaca_fascicularis
ENSCATG00000031303	SRRM1	86	77.256	ENSMFAG00000038841	-	61	80.483	Macaca_fascicularis
ENSCATG00000031303	SRRM1	100	99.877	ENSMMUG00000006645	SRRM1	100	99.877	Macaca_mulatta
ENSCATG00000031303	SRRM1	100	100.000	ENSMNEG00000039415	SRRM1	100	100.000	Macaca_nemestrina
ENSCATG00000031303	SRRM1	59	70.522	ENSMLEG00000032221	-	61	73.194	Mandrillus_leucophaeus
ENSCATG00000031303	SRRM1	100	92.935	ENSMLEG00000038030	-	100	94.363	Mandrillus_leucophaeus
ENSCATG00000031303	SRRM1	100	98.230	ENSMICG00000006553	SRRM1	100	98.230	Microcebus_murinus
ENSCATG00000031303	SRRM1	96	94.869	ENSMLUG00000006246	SRRM1	87	94.869	Myotis_lucifugus
ENSCATG00000031303	SRRM1	100	99.755	ENSNLEG00000008966	SRRM1	100	99.755	Nomascus_leucogenys
ENSCATG00000031303	SRRM1	55	89.815	ENSMEUG00000014704	SRRM1	60	88.095	Notamacropus_eugenii
ENSCATG00000031303	SRRM1	100	96.417	ENSOCUG00000008438	SRRM1	59	95.387	Oryctolagus_cuniculus
ENSCATG00000031303	SRRM1	100	96.950	ENSOGAG00000010210	SRRM1	100	96.950	Otolemur_garnettii
ENSCATG00000031303	SRRM1	100	99.447	ENSPPAG00000043918	SRRM1	100	99.447	Pan_paniscus
ENSCATG00000031303	SRRM1	100	98.119	ENSPPRG00000002509	SRRM1	100	98.119	Panthera_pardus
ENSCATG00000031303	SRRM1	60	96.721	ENSPTIG00000008778	-	61	96.660	Panthera_tigris_altaica
ENSCATG00000031303	SRRM1	100	99.558	ENSPTRG00000000349	SRRM1	100	99.558	Pan_troglodytes
ENSCATG00000031303	SRRM1	100	100.000	ENSPANG00000010194	SRRM1	100	100.000	Papio_anubis
ENSCATG00000031303	SRRM1	55	79.234	ENSPANG00000035568	-	59	78.226	Papio_anubis
ENSCATG00000031303	SRRM1	100	98.585	ENSPPYG00000001716	SRRM1	100	98.585	Pongo_abelii
ENSCATG00000031303	SRRM1	100	97.388	ENSPCOG00000021311	SRRM1	100	97.388	Propithecus_coquereli
ENSCATG00000031303	SRRM1	100	97.168	ENSPVAG00000005836	SRRM1	100	97.168	Pteropus_vampyrus
ENSCATG00000031303	SRRM1	100	93.091	ENSRBIG00000035461	SRRM1	99	92.913	Rhinopithecus_bieti
ENSCATG00000031303	SRRM1	100	99.755	ENSRROG00000035151	SRRM1	100	99.755	Rhinopithecus_roxellana
ENSCATG00000031303	SRRM1	100	96.950	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSCATG00000031303	SRRM1	61	94.754	ENSSARG00000013718	SRRM1	60	94.754	Sorex_araneus
ENSCATG00000031303	SRRM1	60	73.519	ENSSPUG00000015890	SRRM1	57	82.657	Sphenodon_punctatus
ENSCATG00000031303	SRRM1	99	97.805	ENSSSCG00000032947	SRRM1	100	97.808	Sus_scrofa
ENSCATG00000031303	SRRM1	100	96.732	ENSTBEG00000000100	SRRM1	59	96.104	Tupaia_belangeri
ENSCATG00000031303	SRRM1	99	96.597	ENSTTRG00000009365	SRRM1	100	96.597	Tursiops_truncatus
ENSCATG00000031303	SRRM1	88	98.747	ENSUMAG00000013121	SRRM1	95	98.747	Ursus_maritimus
ENSCATG00000031303	SRRM1	96	93.537	ENSVPAG00000007698	SRRM1	100	93.537	Vicugna_pacos
ENSCATG00000031303	SRRM1	96	98.469	ENSVVUG00000026966	SRRM1	97	95.419	Vulpes_vulpes