EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000031956 (Gene tree)
Gene ID: 105584052
Gene Symbol: SMG6
Alias: C17orf31|EST1A|KIAA0732|SMG-6
Full Name: SMG6%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 244007 bases
Position: chrKQ009613.1:13662758-13906764
Accession: 105584052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000016039	EST1	PF10374.9	5.5e-15	1	1
ENSCATP00000016039	EST1_DNA_bind	PF10373.9	4.2e-60	1	1
ENSCATP00000016039	PIN_4	PF13638.6	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000040196	SMG6-201	5975	XM_012056426	ENSCATP00000016039	1419 (aa)	XP_011911816	A0A2K5LSW2

Gene Model

Click here to download ENSCATG00000031956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000031956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000031956	SMG6	100	96.688	ENSG00000070366	SMG6	100	98.630	Homo_sapiens
ENSCATG00000031956	SMG6	83	54.659	ENSAPOG00000019448	smg6	74	55.294	Acanthochromis_polyacanthus
ENSCATG00000031956	SMG6	100	93.094	ENSAMEG00000007632	SMG6	100	93.094	Ailuropoda_melanoleuca
ENSCATG00000031956	SMG6	98	48.914	ENSACIG00000012997	smg6	98	49.115	Amphilophus_citrinellus
ENSCATG00000031956	SMG6	71	59.487	ENSAOCG00000002630	smg6	74	55.000	Amphiprion_ocellaris
ENSCATG00000031956	SMG6	71	59.487	ENSAPEG00000019101	smg6	74	55.078	Amphiprion_percula
ENSCATG00000031956	SMG6	83	55.043	ENSATEG00000006483	smg6	73	54.934	Anabas_testudineus
ENSCATG00000031956	SMG6	87	57.874	ENSACAG00000011783	SMG6	99	59.198	Anolis_carolinensis
ENSCATG00000031956	SMG6	100	95.772	ENSANAG00000035760	SMG6	100	95.772	Aotus_nancymaae
ENSCATG00000031956	SMG6	71	59.171	ENSACLG00000005288	smg6	86	52.928	Astatotilapia_calliptera
ENSCATG00000031956	SMG6	68	63.068	ENSAMXG00000017326	smg6	99	50.450	Astyanax_mexicanus
ENSCATG00000031956	SMG6	100	92.882	ENSBTAG00000000267	SMG6	100	92.882	Bos_taurus
ENSCATG00000031956	SMG6	100	95.208	ENSCJAG00000001820	SMG6	100	95.208	Callithrix_jacchus
ENSCATG00000031956	SMG6	100	92.953	ENSCAFG00000019260	SMG6	100	92.953	Canis_familiaris
ENSCATG00000031956	SMG6	100	92.953	ENSCAFG00020009770	SMG6	100	92.953	Canis_lupus_dingo
ENSCATG00000031956	SMG6	100	92.812	ENSCHIG00000021998	SMG6	100	92.812	Capra_hircus
ENSCATG00000031956	SMG6	100	93.235	ENSTSYG00000003406	SMG6	100	96.477	Carlito_syrichta
ENSCATG00000031956	SMG6	98	77.122	ENSCAPG00000016197	SMG6	99	82.670	Cavia_aperea
ENSCATG00000031956	SMG6	100	90.423	ENSCPOG00000014878	SMG6	100	90.423	Cavia_porcellus
ENSCATG00000031956	SMG6	100	95.701	ENSCCAG00000035801	SMG6	100	95.701	Cebus_capucinus
ENSCATG00000031956	SMG6	100	92.107	ENSCLAG00000006748	SMG6	100	92.107	Chinchilla_lanigera
ENSCATG00000031956	SMG6	100	99.013	ENSCSAG00000013800	SMG6	100	99.013	Chlorocebus_sabaeus
ENSCATG00000031956	SMG6	57	98.507	ENSCHOG00000005024	-	73	98.507	Choloepus_hoffmanni
ENSCATG00000031956	SMG6	100	72.122	ENSCPBG00000020369	SMG6	100	72.746	Chrysemys_picta_bellii
ENSCATG00000031956	SMG6	98	98.488	ENSCANG00000031764	SMG6	100	99.413	Colobus_angolensis_palliatus
ENSCATG00000031956	SMG6	55	87.724	ENSCGRG00001019595	Smg6	98	87.724	Cricetulus_griseus_chok1gshd
ENSCATG00000031956	SMG6	98	84.582	ENSCGRG00000007782	Smg6	100	84.726	Cricetulus_griseus_crigri
ENSCATG00000031956	SMG6	100	52.139	ENSCSEG00000012757	smg6	93	52.059	Cynoglossus_semilaevis
ENSCATG00000031956	SMG6	74	56.567	ENSCVAG00000012789	smg6	74	53.260	Cyprinodon_variegatus
ENSCATG00000031956	SMG6	98	54.894	ENSDARG00000100481	smg6	91	55.695	Danio_rerio
ENSCATG00000031956	SMG6	100	92.530	ENSDNOG00000048283	SMG6	100	92.530	Dasypus_novemcinctus
ENSCATG00000031956	SMG6	100	88.632	ENSDORG00000016614	Smg6	100	88.632	Dipodomys_ordii
ENSCATG00000031956	SMG6	93	100.000	ENSETEG00000016790	SMG6	93	100.000	Echinops_telfairi
ENSCATG00000031956	SMG6	73	47.461	ENSEBUG00000005059	smg6	66	49.855	Eptatretus_burgeri
ENSCATG00000031956	SMG6	99	93.578	ENSEASG00005009318	SMG6	99	93.578	Equus_asinus_asinus
ENSCATG00000031956	SMG6	99	93.296	ENSECAG00000006519	SMG6	99	93.296	Equus_caballus
ENSCATG00000031956	SMG6	100	81.748	ENSEEUG00000003493	SMG6	100	81.748	Erinaceus_europaeus
ENSCATG00000031956	SMG6	71	60.093	ENSELUG00000005934	smg6	69	55.241	Esox_lucius
ENSCATG00000031956	SMG6	100	93.798	ENSFCAG00000028817	SMG6	100	93.798	Felis_catus
ENSCATG00000031956	SMG6	98	71.601	ENSFALG00000006538	SMG6	100	71.673	Ficedula_albicollis
ENSCATG00000031956	SMG6	100	91.755	ENSFDAG00000015106	SMG6	100	91.755	Fukomys_damarensis
ENSCATG00000031956	SMG6	83	53.074	ENSFHEG00000013282	smg6	75	53.230	Fundulus_heteroclitus
ENSCATG00000031956	SMG6	61	69.159	ENSGMOG00000019077	smg6	68	69.159	Gadus_morhua
ENSCATG00000031956	SMG6	100	71.548	ENSGALG00000003108	SMG6	98	71.617	Gallus_gallus
ENSCATG00000031956	SMG6	83	54.039	ENSGAFG00000000379	smg6	74	54.069	Gambusia_affinis
ENSCATG00000031956	SMG6	91	53.761	ENSGACG00000020521	smg6	100	53.466	Gasterosteus_aculeatus
ENSCATG00000031956	SMG6	98	71.773	ENSGAGG00000025617	SMG6	100	72.411	Gopherus_agassizii
ENSCATG00000031956	SMG6	100	97.815	ENSGGOG00000017156	SMG6	100	97.815	Gorilla_gorilla
ENSCATG00000031956	SMG6	88	52.788	ENSHBUG00000021311	smg6	78	53.949	Haplochromis_burtoni
ENSCATG00000031956	SMG6	100	91.344	ENSHGLG00000012882	SMG6	100	91.344	Heterocephalus_glaber_female
ENSCATG00000031956	SMG6	100	91.414	ENSHGLG00100017815	SMG6	100	91.414	Heterocephalus_glaber_male
ENSCATG00000031956	SMG6	71	58.969	ENSHCOG00000008761	smg6	83	58.913	Hippocampus_comes
ENSCATG00000031956	SMG6	83	55.346	ENSIPUG00000012493	smg6	75	54.659	Ictalurus_punctatus
ENSCATG00000031956	SMG6	100	93.446	ENSSTOG00000028127	SMG6	100	93.446	Ictidomys_tridecemlineatus
ENSCATG00000031956	SMG6	79	88.314	ENSJJAG00000015367	Smg6	95	86.395	Jaculus_jaculus
ENSCATG00000031956	SMG6	73	59.246	ENSKMAG00000000279	smg6	76	54.040	Kryptolebias_marmoratus
ENSCATG00000031956	SMG6	55	58.831	ENSLACG00000000806	-	98	59.273	Latimeria_chalumnae
ENSCATG00000031956	SMG6	73	65.108	ENSLOCG00000006448	smg6	100	54.955	Lepisosteus_oculatus
ENSCATG00000031956	SMG6	100	92.389	ENSLAFG00000001261	SMG6	100	92.389	Loxodonta_africana
ENSCATG00000031956	SMG6	100	99.154	ENSMFAG00000003394	SMG6	100	99.154	Macaca_fascicularis
ENSCATG00000031956	SMG6	100	99.084	ENSMMUG00000023161	SMG6	100	99.084	Macaca_mulatta
ENSCATG00000031956	SMG6	100	93.886	ENSMNEG00000044592	SMG6	100	93.886	Macaca_nemestrina
ENSCATG00000031956	SMG6	98	96.972	ENSMLEG00000029353	SMG6	100	99.436	Mandrillus_leucophaeus
ENSCATG00000031956	SMG6	83	56.059	ENSMAMG00000020119	smg6	98	49.550	Mastacembelus_armatus
ENSCATG00000031956	SMG6	71	59.191	ENSMZEG00005024736	smg6	80	53.086	Maylandia_zebra
ENSCATG00000031956	SMG6	73	66.131	ENSMGAG00000005401	-	99	66.131	Meleagris_gallopavo
ENSCATG00000031956	SMG6	100	94.644	ENSMICG00000012913	SMG6	100	94.644	Microcebus_murinus
ENSCATG00000031956	SMG6	100	48.104	ENSMMOG00000010883	smg6	100	48.310	Mola_mola
ENSCATG00000031956	SMG6	100	86.287	ENSMODG00000010622	SMG6	100	86.287	Monodelphis_domestica
ENSCATG00000031956	SMG6	83	54.623	ENSMALG00000001106	smg6	73	55.124	Monopterus_albus
ENSCATG00000031956	SMG6	100	91.473	MGP_CAROLIEiJ_G0016729	Smg6	100	91.473	Mus_caroli
ENSCATG00000031956	SMG6	100	91.261	ENSMUSG00000038290	Smg6	100	91.261	Mus_musculus
ENSCATG00000031956	SMG6	100	90.839	MGP_PahariEiJ_G0017866	Smg6	100	90.839	Mus_pahari
ENSCATG00000031956	SMG6	100	91.261	MGP_SPRETEiJ_G0017572	Smg6	100	91.261	Mus_spretus
ENSCATG00000031956	SMG6	100	93.094	ENSMPUG00000013046	SMG6	100	93.094	Mustela_putorius_furo
ENSCATG00000031956	SMG6	100	92.530	ENSMLUG00000005739	SMG6	100	92.530	Myotis_lucifugus
ENSCATG00000031956	SMG6	98	90.209	ENSNGAG00000007287	Smg6	100	90.209	Nannospalax_galili
ENSCATG00000031956	SMG6	88	52.206	ENSNBRG00000009511	smg6	100	48.951	Neolamprologus_brichardi
ENSCATG00000031956	SMG6	98	97.059	ENSNLEG00000017171	SMG6	100	98.826	Nomascus_leucogenys
ENSCATG00000031956	SMG6	98	82.399	ENSMEUG00000015804	SMG6	100	82.399	Notamacropus_eugenii
ENSCATG00000031956	SMG6	62	90.498	ENSOPRG00000000579	SMG6	85	97.368	Ochotona_princeps
ENSCATG00000031956	SMG6	100	84.329	ENSODEG00000008038	SMG6	100	84.329	Octodon_degus
ENSCATG00000031956	SMG6	100	50.905	ENSONIG00000005594	smg6	100	51.867	Oreochromis_niloticus
ENSCATG00000031956	SMG6	100	92.892	ENSOCUG00000013018	SMG6	100	93.033	Oryctolagus_cuniculus
ENSCATG00000031956	SMG6	83	54.488	ENSORLG00000003317	smg6	74	54.710	Oryzias_latipes
ENSCATG00000031956	SMG6	83	54.416	ENSORLG00020015343	smg6	74	54.245	Oryzias_latipes_hni
ENSCATG00000031956	SMG6	83	54.367	ENSORLG00015020454	smg6	74	54.510	Oryzias_latipes_hsok
ENSCATG00000031956	SMG6	83	53.459	ENSOMEG00000010838	smg6	75	53.901	Oryzias_melastigma
ENSCATG00000031956	SMG6	100	94.085	ENSOGAG00000004483	SMG6	100	94.085	Otolemur_garnettii
ENSCATG00000031956	SMG6	100	91.056	ENSOARG00000015076	SMG6	100	92.635	Ovis_aries
ENSCATG00000031956	SMG6	100	97.533	ENSPPAG00000043296	SMG6	100	97.533	Pan_paniscus
ENSCATG00000031956	SMG6	100	93.869	ENSPPRG00000014581	SMG6	100	93.869	Panthera_pardus
ENSCATG00000031956	SMG6	98	93.935	ENSPTIG00000008925	SMG6	100	96.673	Panthera_tigris_altaica
ENSCATG00000031956	SMG6	100	97.604	ENSPTRG00000008544	SMG6	100	98.630	Pan_troglodytes
ENSCATG00000031956	SMG6	100	99.084	ENSPANG00000024588	SMG6	100	99.084	Papio_anubis
ENSCATG00000031956	SMG6	89	70.758	ENSPSIG00000006660	SMG6	96	70.837	Pelodiscus_sinensis
ENSCATG00000031956	SMG6	98	60.025	ENSPMGG00000000844	smg6	100	60.614	Periophthalmus_magnuspinnatus
ENSCATG00000031956	SMG6	100	92.178	ENSPEMG00000020707	Smg6	100	92.178	Peromyscus_maniculatus_bairdii
ENSCATG00000031956	SMG6	100	51.639	ENSPFOG00000012035	smg6	100	51.609	Poecilia_formosa
ENSCATG00000031956	SMG6	77	56.775	ENSPLAG00000017660	smg6	74	54.245	Poecilia_latipinna
ENSCATG00000031956	SMG6	77	56.325	ENSPMEG00000000258	smg6	74	54.560	Poecilia_mexicana
ENSCATG00000031956	SMG6	83	54.553	ENSPREG00000010066	smg6	74	54.474	Poecilia_reticulata
ENSCATG00000031956	SMG6	100	92.124	ENSPPYG00000007790	SMG6	100	92.124	Pongo_abelii
ENSCATG00000031956	SMG6	100	88.443	ENSPCAG00000000552	SMG6	100	88.443	Procavia_capensis
ENSCATG00000031956	SMG6	100	94.503	ENSPCOG00000020925	SMG6	100	94.503	Propithecus_coquereli
ENSCATG00000031956	SMG6	86	100.000	ENSPVAG00000002159	SMG6	86	100.000	Pteropus_vampyrus
ENSCATG00000031956	SMG6	88	53.610	ENSPNYG00000024151	smg6	100	48.702	Pundamilia_nyererei
ENSCATG00000031956	SMG6	85	52.992	ENSPNAG00000015480	smg6	90	47.967	Pygocentrus_nattereri
ENSCATG00000031956	SMG6	100	91.614	ENSRNOG00000003041	Smg6	100	91.614	Rattus_norvegicus
ENSCATG00000031956	SMG6	100	98.238	ENSRBIG00000024746	SMG6	100	98.238	Rhinopithecus_bieti
ENSCATG00000031956	SMG6	100	98.309	ENSRROG00000030423	SMG6	100	99.022	Rhinopithecus_roxellana
ENSCATG00000031956	SMG6	100	95.631	ENSSBOG00000022518	SMG6	100	94.010	Saimiri_boliviensis_boliviensis
ENSCATG00000031956	SMG6	98	85.438	ENSSHAG00000010045	SMG6	98	85.438	Sarcophilus_harrisii
ENSCATG00000031956	SMG6	72	62.140	ENSSFOG00015005436	smg6	73	54.970	Scleropages_formosus
ENSCATG00000031956	SMG6	83	55.245	ENSSMAG00000019777	smg6	73	54.871	Scophthalmus_maximus
ENSCATG00000031956	SMG6	83	54.957	ENSSDUG00000016412	smg6	74	54.914	Seriola_dumerili
ENSCATG00000031956	SMG6	80	54.089	ENSSLDG00000020747	smg6	77	53.964	Seriola_lalandi_dorsalis
ENSCATG00000031956	SMG6	99	70.494	ENSSPUG00000007152	SMG6	99	70.494	Sphenodon_punctatus
ENSCATG00000031956	SMG6	71	59.174	ENSSPAG00000015633	smg6	74	54.867	Stegastes_partitus
ENSCATG00000031956	SMG6	100	92.254	ENSSSCG00000017826	SMG6	100	92.254	Sus_scrofa
ENSCATG00000031956	SMG6	100	72.090	ENSTGUG00000005836	SMG6	100	72.230	Taeniopygia_guttata
ENSCATG00000031956	SMG6	100	47.649	ENSTRUG00000000358	smg6	100	48.046	Takifugu_rubripes
ENSCATG00000031956	SMG6	100	49.868	ENSTNIG00000016164	smg6	100	50.297	Tetraodon_nigroviridis
ENSCATG00000031956	SMG6	100	89.218	ENSTBEG00000011424	SMG6	100	89.218	Tupaia_belangeri
ENSCATG00000031956	SMG6	91	91.515	ENSTTRG00000001175	SMG6	91	91.515	Tursiops_truncatus
ENSCATG00000031956	SMG6	100	93.319	ENSUAMG00000025152	SMG6	100	93.300	Ursus_americanus
ENSCATG00000031956	SMG6	98	93.646	ENSUMAG00000009306	SMG6	100	93.646	Ursus_maritimus
ENSCATG00000031956	SMG6	85	92.593	ENSVPAG00000000225	SMG6	88	92.593	Vicugna_pacos
ENSCATG00000031956	SMG6	100	92.812	ENSVVUG00000021727	SMG6	100	92.812	Vulpes_vulpes
ENSCATG00000031956	SMG6	98	59.267	ENSXETG00000023799	SMG6	100	59.056	Xenopus_tropicalis
ENSCATG00000031956	SMG6	72	59.610	ENSXCOG00000009867	smg6	74	54.864	Xiphophorus_couchianus
ENSCATG00000031956	SMG6	83	54.304	ENSXMAG00000010321	smg6	74	53.948	Xiphophorus_maculatus