EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000031980 (Gene tree)
Gene ID: 105597121
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 374246 bases
Position: chrKQ010826.1:216676-590921
Accession: 105597121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000016081	CMS1	PF14617.6	5.6e-33	1	1
ENSCATP00000016080	CMS1	PF14617.6	6.9e-33	1	1
ENSCATP00000016081	DEAD	PF00270.29	8.9e-06	1	1
ENSCATP00000016080	DEAD	PF00270.29	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000040239	CMSS1-202	1410	XM_012084993	ENSCATP00000016081	261 (aa)	XP_011940383	A0A2K5LT08
ENSCATT00000040238	CMSS1-201	840	XM_012084992	ENSCATP00000016080	279 (aa)	XP_011940382	A0A2K5LT05

Gene Model

Click here to download ENSCATG00000031980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000031980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000031980	CMSS1	100	96.552	ENSG00000184220	CMSS1	100	96.552	Homo_sapiens
ENSCATG00000031980	CMSS1	77	64.851	ENSAPOG00000010604	cmss1	82	64.851	Acanthochromis_polyacanthus
ENSCATG00000031980	CMSS1	99	89.575	ENSAMEG00000004092	CMSS1	100	89.575	Ailuropoda_melanoleuca
ENSCATG00000031980	CMSS1	77	54.455	ENSACIG00000021854	cmss1	86	48.770	Amphilophus_citrinellus
ENSCATG00000031980	CMSS1	100	50.825	ENSAOCG00000013361	cmss1	100	52.508	Amphiprion_ocellaris
ENSCATG00000031980	CMSS1	77	64.851	ENSAPEG00000005829	cmss1	100	52.333	Amphiprion_percula
ENSCATG00000031980	CMSS1	100	51.903	ENSATEG00000008209	cmss1	100	53.425	Anabas_testudineus
ENSCATG00000031980	CMSS1	88	68.696	ENSAPLG00000010542	CMSS1	100	68.696	Anas_platyrhynchos
ENSCATG00000031980	CMSS1	99	61.567	ENSACAG00000011065	CMSS1	99	61.111	Anolis_carolinensis
ENSCATG00000031980	CMSS1	100	93.893	ENSANAG00000023565	CMSS1	100	93.893	Aotus_nancymaae
ENSCATG00000031980	CMSS1	100	49.013	ENSACLG00000027294	cmss1	100	50.329	Astatotilapia_calliptera
ENSCATG00000031980	CMSS1	100	46.000	ENSAMXG00000002046	cmss1	100	46.959	Astyanax_mexicanus
ENSCATG00000031980	CMSS1	100	87.097	ENSBTAG00000013663	CMSS1	100	87.097	Bos_taurus
ENSCATG00000031980	CMSS1	100	93.511	ENSCJAG00000000610	CMSS1	100	93.511	Callithrix_jacchus
ENSCATG00000031980	CMSS1	100	90.421	ENSCAFG00000009230	CMSS1	95	90.421	Canis_familiaris
ENSCATG00000031980	CMSS1	98	91.051	ENSCAFG00020009464	-	94	90.698	Canis_lupus_dingo
ENSCATG00000031980	CMSS1	89	84.483	ENSCAFG00020024156	-	76	80.816	Canis_lupus_dingo
ENSCATG00000031980	CMSS1	98	88.716	ENSCHIG00000013003	CMSS1	93	88.716	Capra_hircus
ENSCATG00000031980	CMSS1	99	90.347	ENSTSYG00000009266	CMSS1	99	90.347	Carlito_syrichta
ENSCATG00000031980	CMSS1	85	73.799	ENSCAPG00000013584	CMSS1	100	74.236	Cavia_aperea
ENSCATG00000031980	CMSS1	100	87.097	ENSCPOG00000014680	CMSS1	100	87.097	Cavia_porcellus
ENSCATG00000031980	CMSS1	100	95.038	ENSCCAG00000034685	CMSS1	100	95.038	Cebus_capucinus
ENSCATG00000031980	CMSS1	88	93.886	ENSCLAG00000011241	CMSS1	98	93.886	Chinchilla_lanigera
ENSCATG00000031980	CMSS1	94	100.000	ENSCSAG00000006024	CMSS1	100	100.000	Chlorocebus_sabaeus
ENSCATG00000031980	CMSS1	100	68.817	ENSCHOG00000012098	CMSS1	100	68.817	Choloepus_hoffmanni
ENSCATG00000031980	CMSS1	72	41.327	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSCATG00000031980	CMSS1	100	98.925	ENSCANG00000031337	CMSS1	100	98.925	Colobus_angolensis_palliatus
ENSCATG00000031980	CMSS1	100	82.079	ENSCGRG00001014305	Cmss1	100	82.079	Cricetulus_griseus_chok1gshd
ENSCATG00000031980	CMSS1	98	83.594	ENSCGRG00000006722	Cmss1	99	83.594	Cricetulus_griseus_crigri
ENSCATG00000031980	CMSS1	100	50.842	ENSCSEG00000004958	cmss1	100	50.658	Cynoglossus_semilaevis
ENSCATG00000031980	CMSS1	100	51.211	ENSCVAG00000005039	cmss1	100	52.577	Cyprinodon_variegatus
ENSCATG00000031980	CMSS1	100	47.475	ENSDARG00000112579	cmss1	100	46.918	Danio_rerio
ENSCATG00000031980	CMSS1	100	85.496	ENSDNOG00000040418	CMSS1	93	85.496	Dasypus_novemcinctus
ENSCATG00000031980	CMSS1	100	86.738	ENSDORG00000010461	Cmss1	100	86.738	Dipodomys_ordii
ENSCATG00000031980	CMSS1	51	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSCATG00000031980	CMSS1	99	83.846	ENSEASG00005010966	CMSS1	99	92.694	Equus_asinus_asinus
ENSCATG00000031980	CMSS1	98	90.272	ENSECAG00000015662	CMSS1	99	92.035	Equus_caballus
ENSCATG00000031980	CMSS1	100	56.272	ENSEEUG00000007624	-	100	56.272	Erinaceus_europaeus
ENSCATG00000031980	CMSS1	100	50.000	ENSELUG00000019459	cmss1	100	51.333	Esox_lucius
ENSCATG00000031980	CMSS1	100	92.115	ENSFCAG00000044577	CMSS1	100	92.115	Felis_catus
ENSCATG00000031980	CMSS1	91	64.979	ENSFALG00000005816	CMSS1	100	64.979	Ficedula_albicollis
ENSCATG00000031980	CMSS1	87	91.228	ENSFDAG00000012577	CMSS1	100	91.228	Fukomys_damarensis
ENSCATG00000031980	CMSS1	87	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSCATG00000031980	CMSS1	99	49.831	ENSGMOG00000016729	cmss1	100	52.083	Gadus_morhua
ENSCATG00000031980	CMSS1	100	62.642	ENSGALG00000015267	CMSS1	100	62.977	Gallus_gallus
ENSCATG00000031980	CMSS1	79	63.768	ENSGAFG00000021217	cmss1	77	63.861	Gambusia_affinis
ENSCATG00000031980	CMSS1	99	48.227	ENSGACG00000002798	cmss1	100	49.645	Gasterosteus_aculeatus
ENSCATG00000031980	CMSS1	91	70.042	ENSGAGG00000019861	CMSS1	92	70.042	Gopherus_agassizii
ENSCATG00000031980	CMSS1	100	97.701	ENSGGOG00000014125	CMSS1	100	97.701	Gorilla_gorilla
ENSCATG00000031980	CMSS1	100	49.175	ENSHBUG00000008431	cmss1	100	49.835	Haplochromis_burtoni
ENSCATG00000031980	CMSS1	97	85.375	ENSHGLG00000019481	CMSS1	100	85.375	Heterocephalus_glaber_female
ENSCATG00000031980	CMSS1	98	85.603	ENSHGLG00100010314	CMSS1	100	85.603	Heterocephalus_glaber_male
ENSCATG00000031980	CMSS1	100	53.333	ENSHCOG00000003222	cmss1	100	53.000	Hippocampus_comes
ENSCATG00000031980	CMSS1	100	47.931	ENSIPUG00000011591	cmss1	100	47.931	Ictalurus_punctatus
ENSCATG00000031980	CMSS1	100	89.964	ENSSTOG00000019366	CMSS1	100	89.964	Ictidomys_tridecemlineatus
ENSCATG00000031980	CMSS1	100	83.154	ENSJJAG00000014894	Cmss1	100	83.154	Jaculus_jaculus
ENSCATG00000031980	CMSS1	77	54.455	ENSKMAG00000002390	cmss1	81	54.455	Kryptolebias_marmoratus
ENSCATG00000031980	CMSS1	85	53.333	ENSLBEG00000006298	cmss1	83	59.113	Labrus_bergylta
ENSCATG00000031980	CMSS1	87	64.783	ENSLACG00000009293	CMSS1	100	64.783	Latimeria_chalumnae
ENSCATG00000031980	CMSS1	100	50.704	ENSLOCG00000009391	cmss1	100	51.408	Lepisosteus_oculatus
ENSCATG00000031980	CMSS1	87	91.667	ENSLAFG00000017509	CMSS1	100	91.667	Loxodonta_africana
ENSCATG00000031980	CMSS1	100	99.617	ENSMFAG00000045006	CMSS1	100	99.617	Macaca_fascicularis
ENSCATG00000031980	CMSS1	100	99.234	ENSMMUG00000002939	CMSS1	100	99.234	Macaca_mulatta
ENSCATG00000031980	CMSS1	100	99.234	ENSMNEG00000031315	CMSS1	100	99.234	Macaca_nemestrina
ENSCATG00000031980	CMSS1	100	99.617	ENSMLEG00000033660	CMSS1	100	99.617	Mandrillus_leucophaeus
ENSCATG00000031980	CMSS1	100	53.103	ENSMAMG00000017176	cmss1	100	52.560	Mastacembelus_armatus
ENSCATG00000031980	CMSS1	100	49.013	ENSMZEG00005021886	cmss1	100	50.329	Maylandia_zebra
ENSCATG00000031980	CMSS1	87	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSCATG00000031980	CMSS1	100	60.215	ENSMAUG00000020609	Cmss1	100	60.215	Mesocricetus_auratus
ENSCATG00000031980	CMSS1	100	91.756	ENSMICG00000048977	CMSS1	100	91.756	Microcebus_murinus
ENSCATG00000031980	CMSS1	100	81.004	ENSMOCG00000021937	Cmss1	100	81.004	Microtus_ochrogaster
ENSCATG00000031980	CMSS1	77	62.376	ENSMMOG00000019794	cmss1	95	57.511	Mola_mola
ENSCATG00000031980	CMSS1	97	73.622	ENSMODG00000002275	CMSS1	97	72.308	Monodelphis_domestica
ENSCATG00000031980	CMSS1	100	52.234	ENSMALG00000004250	cmss1	100	51.890	Monopterus_albus
ENSCATG00000031980	CMSS1	100	81.786	MGP_CAROLIEiJ_G0020824	Cmss1	100	81.786	Mus_caroli
ENSCATG00000031980	CMSS1	100	82.500	ENSMUSG00000022748	Cmss1	100	82.500	Mus_musculus
ENSCATG00000031980	CMSS1	100	81.071	MGP_PahariEiJ_G0016524	Cmss1	100	81.071	Mus_pahari
ENSCATG00000031980	CMSS1	100	81.786	MGP_SPRETEiJ_G0021724	Cmss1	100	81.786	Mus_spretus
ENSCATG00000031980	CMSS1	99	92.308	ENSMPUG00000011324	CMSS1	100	92.308	Mustela_putorius_furo
ENSCATG00000031980	CMSS1	99	91.188	ENSMLUG00000001131	CMSS1	99	91.571	Myotis_lucifugus
ENSCATG00000031980	CMSS1	100	84.946	ENSNGAG00000020316	Cmss1	100	84.946	Nannospalax_galili
ENSCATG00000031980	CMSS1	100	48.684	ENSNBRG00000003095	cmss1	100	50.329	Neolamprologus_brichardi
ENSCATG00000031980	CMSS1	100	98.467	ENSNLEG00000034172	CMSS1	100	98.467	Nomascus_leucogenys
ENSCATG00000031980	CMSS1	87	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSCATG00000031980	CMSS1	100	90.681	ENSOPRG00000002986	CMSS1	100	90.681	Ochotona_princeps
ENSCATG00000031980	CMSS1	100	86.022	ENSODEG00000005226	-	100	86.022	Octodon_degus
ENSCATG00000031980	CMSS1	100	80.783	ENSODEG00000003558	-	100	80.783	Octodon_degus
ENSCATG00000031980	CMSS1	100	69.892	ENSODEG00000009446	-	100	69.892	Octodon_degus
ENSCATG00000031980	CMSS1	100	75.269	ENSODEG00000001853	-	100	75.269	Octodon_degus
ENSCATG00000031980	CMSS1	77	61.386	ENSONIG00000006678	cmss1	88	55.556	Oreochromis_niloticus
ENSCATG00000031980	CMSS1	98	73.077	ENSOANG00000007529	CMSS1	100	74.678	Ornithorhynchus_anatinus
ENSCATG00000031980	CMSS1	100	90.805	ENSOCUG00000025366	CMSS1	95	90.805	Oryctolagus_cuniculus
ENSCATG00000031980	CMSS1	100	53.425	ENSORLG00000020340	cmss1	100	53.741	Oryzias_latipes
ENSCATG00000031980	CMSS1	88	54.585	ENSORLG00020012235	cmss1	99	54.506	Oryzias_latipes_hni
ENSCATG00000031980	CMSS1	77	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSCATG00000031980	CMSS1	100	54.138	ENSOMEG00000012555	cmss1	100	54.325	Oryzias_melastigma
ENSCATG00000031980	CMSS1	87	92.105	ENSOGAG00000002045	CMSS1	100	92.105	Otolemur_garnettii
ENSCATG00000031980	CMSS1	98	88.760	ENSOARG00000017899	CMSS1	89	88.760	Ovis_aries
ENSCATG00000031980	CMSS1	100	96.935	ENSPPAG00000038515	CMSS1	95	97.674	Pan_paniscus
ENSCATG00000031980	CMSS1	100	92.115	ENSPPRG00000016767	CMSS1	100	92.115	Panthera_pardus
ENSCATG00000031980	CMSS1	100	91.756	ENSPTIG00000018274	CMSS1	100	91.756	Panthera_tigris_altaica
ENSCATG00000031980	CMSS1	100	96.935	ENSPTRG00000015157	CMSS1	100	97.143	Pan_troglodytes
ENSCATG00000031980	CMSS1	100	94.253	ENSPANG00000019980	CMSS1	99	94.961	Papio_anubis
ENSCATG00000031980	CMSS1	91	56.226	ENSPKIG00000012609	cmss1	97	56.439	Paramormyrops_kingsleyae
ENSCATG00000031980	CMSS1	88	73.362	ENSPSIG00000003849	CMSS1	100	73.362	Pelodiscus_sinensis
ENSCATG00000031980	CMSS1	90	56.250	ENSPMGG00000010286	cmss1	100	57.627	Periophthalmus_magnuspinnatus
ENSCATG00000031980	CMSS1	100	83.214	ENSPEMG00000016384	Cmss1	100	83.214	Peromyscus_maniculatus_bairdii
ENSCATG00000031980	CMSS1	78	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSCATG00000031980	CMSS1	100	71.970	ENSPCIG00000015656	CMSS1	100	71.970	Phascolarctos_cinereus
ENSCATG00000031980	CMSS1	100	52.098	ENSPFOG00000016849	cmss1	100	52.448	Poecilia_formosa
ENSCATG00000031980	CMSS1	100	51.748	ENSPLAG00000008323	cmss1	100	52.098	Poecilia_latipinna
ENSCATG00000031980	CMSS1	100	50.164	ENSPMEG00000021020	cmss1	100	53.103	Poecilia_mexicana
ENSCATG00000031980	CMSS1	77	62.871	ENSPREG00000007618	cmss1	69	62.871	Poecilia_reticulata
ENSCATG00000031980	CMSS1	99	96.512	ENSPPYG00000013606	CMSS1	100	95.341	Pongo_abelii
ENSCATG00000031980	CMSS1	100	91.188	ENSPCOG00000020035	CMSS1	100	91.188	Propithecus_coquereli
ENSCATG00000031980	CMSS1	100	78.853	ENSPVAG00000017031	CMSS1	100	78.853	Pteropus_vampyrus
ENSCATG00000031980	CMSS1	91	48.921	ENSPNYG00000013428	cmss1	97	50.360	Pundamilia_nyererei
ENSCATG00000031980	CMSS1	100	47.176	ENSPNAG00000007912	cmss1	100	47.841	Pygocentrus_nattereri
ENSCATG00000031980	CMSS1	99	81.923	ENSRNOG00000027888	Cmss1	100	82.308	Rattus_norvegicus
ENSCATG00000031980	CMSS1	100	98.467	ENSRBIG00000037931	CMSS1	100	98.467	Rhinopithecus_bieti
ENSCATG00000031980	CMSS1	100	98.467	ENSRROG00000042910	CMSS1	100	98.467	Rhinopithecus_roxellana
ENSCATG00000031980	CMSS1	100	94.275	ENSSBOG00000030980	CMSS1	100	94.275	Saimiri_boliviensis_boliviensis
ENSCATG00000031980	CMSS1	95	74.603	ENSSHAG00000009321	CMSS1	99	74.603	Sarcophilus_harrisii
ENSCATG00000031980	CMSS1	100	53.535	ENSSFOG00015001509	cmss1	100	55.137	Scleropages_formosus
ENSCATG00000031980	CMSS1	100	51.203	ENSSMAG00000001653	cmss1	100	51.839	Scophthalmus_maximus
ENSCATG00000031980	CMSS1	100	52.203	ENSSDUG00000007719	cmss1	100	54.110	Seriola_dumerili
ENSCATG00000031980	CMSS1	79	63.768	ENSSLDG00000012300	cmss1	75	59.444	Seriola_lalandi_dorsalis
ENSCATG00000031980	CMSS1	100	74.643	ENSSARG00000003584	CMSS1	100	74.643	Sorex_araneus
ENSCATG00000031980	CMSS1	87	69.469	ENSSPUG00000003865	CMSS1	100	69.469	Sphenodon_punctatus
ENSCATG00000031980	CMSS1	79	64.078	ENSSPAG00000019182	cmss1	82	54.887	Stegastes_partitus
ENSCATG00000031980	CMSS1	100	92.115	ENSSSCG00000011970	CMSS1	100	92.115	Sus_scrofa
ENSCATG00000031980	CMSS1	88	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSCATG00000031980	CMSS1	100	49.662	ENSTRUG00000015265	cmss1	100	50.355	Takifugu_rubripes
ENSCATG00000031980	CMSS1	77	56.436	ENSTNIG00000002880	cmss1	73	56.436	Tetraodon_nigroviridis
ENSCATG00000031980	CMSS1	100	60.357	ENSTBEG00000016722	CMSS1	100	60.357	Tupaia_belangeri
ENSCATG00000031980	CMSS1	100	86.738	ENSTTRG00000001562	CMSS1	100	86.738	Tursiops_truncatus
ENSCATG00000031980	CMSS1	99	91.120	ENSUAMG00000024209	CMSS1	100	94.170	Ursus_americanus
ENSCATG00000031980	CMSS1	99	91.085	ENSUMAG00000001983	CMSS1	99	90.698	Ursus_maritimus
ENSCATG00000031980	CMSS1	100	67.742	ENSVPAG00000000263	CMSS1	100	67.742	Vicugna_pacos
ENSCATG00000031980	CMSS1	83	92.593	ENSVVUG00000007776	-	85	92.593	Vulpes_vulpes
ENSCATG00000031980	CMSS1	94	90.244	ENSVVUG00000021647	-	100	90.244	Vulpes_vulpes
ENSCATG00000031980	CMSS1	100	54.804	ENSXETG00000011858	cmss1	100	54.804	Xenopus_tropicalis
ENSCATG00000031980	CMSS1	80	62.981	ENSXCOG00000018724	cmss1	69	63.366	Xiphophorus_couchianus
ENSCATG00000031980	CMSS1	80	62.981	ENSXMAG00000011243	cmss1	76	63.366	Xiphophorus_maculatus