EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000032174 (Gene tree)
Gene ID: 105587860
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 24864 bases
Position: chrKQ009501.1:31972151-31997014
Accession: 105587860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000016521	HVSL	PF09749.9	6.2e-63	1	1
ENSCATP00000016531	HVSL	PF09749.9	3.5e-51	1	2
ENSCATP00000016531	HVSL	PF09749.9	3.5e-51	2	2
ENSCATP00000016535	HVSL	PF09749.9	6.2e-29	1	1
ENSCATP00000016537	HVSL	PF09749.9	9.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000040696	USB1-203	477	-	ENSCATP00000016535	158 (aa)	-	A0A2K5LUB1
ENSCATT00000040682	USB1-201	2656	XM_012064547	ENSCATP00000016521	265 (aa)	XP_011919937	A0A2K5LU96
ENSCATT00000040692	USB1-202	744	-	ENSCATP00000016531	247 (aa)	-	A0A2K5LUA8
ENSCATT00000040698	USB1-204	543	-	ENSCATP00000016537	180 (aa)	-	A0A2K5LUC9

Gene Model

Click here to download ENSCATG00000032174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000032174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000032174	USB1	100	95.849	ENSG00000103005	USB1	100	96.729	Homo_sapiens
ENSCATG00000032174	USB1	98	46.360	ENSAPOG00000011942	usb1	83	51.073	Acanthochromis_polyacanthus
ENSCATG00000032174	USB1	100	84.015	ENSAMEG00000017205	USB1	100	83.271	Ailuropoda_melanoleuca
ENSCATG00000032174	USB1	85	54.018	ENSACIG00000012234	usb1	82	54.018	Amphilophus_citrinellus
ENSCATG00000032174	USB1	95	50.598	ENSAOCG00000014831	usb1	80	54.185	Amphiprion_ocellaris
ENSCATG00000032174	USB1	95	50.996	ENSAPEG00000000296	usb1	80	54.626	Amphiprion_percula
ENSCATG00000032174	USB1	99	49.430	ENSATEG00000009348	usb1	82	53.247	Anabas_testudineus
ENSCATG00000032174	USB1	85	70.925	ENSAPLG00000002756	USB1	100	70.796	Anas_platyrhynchos
ENSCATG00000032174	USB1	86	64.629	ENSACAG00000015481	USB1	100	64.629	Anolis_carolinensis
ENSCATG00000032174	USB1	100	94.717	ENSANAG00000035640	USB1	100	94.717	Aotus_nancymaae
ENSCATG00000032174	USB1	94	50.201	ENSACLG00000020586	usb1	80	53.097	Astatotilapia_calliptera
ENSCATG00000032174	USB1	84	51.570	ENSAMXG00000040146	usb1	74	51.570	Astyanax_mexicanus
ENSCATG00000032174	USB1	100	84.528	ENSBTAG00000015758	USB1	100	84.528	Bos_taurus
ENSCATG00000032174	USB1	100	95.472	ENSCJAG00000011733	USB1	100	95.472	Callithrix_jacchus
ENSCATG00000032174	USB1	99	81.985	ENSCAFG00000008556	USB1	73	80.882	Canis_familiaris
ENSCATG00000032174	USB1	99	83.019	ENSCAFG00020009263	USB1	99	79.853	Canis_lupus_dingo
ENSCATG00000032174	USB1	100	84.151	ENSCHIG00000024290	USB1	100	84.151	Capra_hircus
ENSCATG00000032174	USB1	100	89.811	ENSTSYG00000006997	USB1	100	89.811	Carlito_syrichta
ENSCATG00000032174	USB1	75	86.441	ENSCAPG00000009057	USB1	100	73.364	Cavia_aperea
ENSCATG00000032174	USB1	100	83.209	ENSCPOG00000014325	USB1	100	82.090	Cavia_porcellus
ENSCATG00000032174	USB1	100	95.094	ENSCCAG00000022132	USB1	100	95.094	Cebus_capucinus
ENSCATG00000032174	USB1	66	88.068	ENSCLAG00000007363	USB1	100	88.068	Chinchilla_lanigera
ENSCATG00000032174	USB1	100	98.113	ENSCSAG00000004783	USB1	100	98.113	Chlorocebus_sabaeus
ENSCATG00000032174	USB1	92	66.939	ENSCPBG00000026943	USB1	100	62.590	Chrysemys_picta_bellii
ENSCATG00000032174	USB1	83	30.131	ENSCSAVG00000000894	-	82	30.131	Ciona_savignyi
ENSCATG00000032174	USB1	100	96.981	ENSCANG00000037135	USB1	100	96.981	Colobus_angolensis_palliatus
ENSCATG00000032174	USB1	100	84.701	ENSCGRG00001011243	USB1	100	84.328	Cricetulus_griseus_chok1gshd
ENSCATG00000032174	USB1	100	84.701	ENSCGRG00000013252	USB1	100	84.328	Cricetulus_griseus_crigri
ENSCATG00000032174	USB1	98	47.445	ENSCSEG00000013881	usb1	84	50.215	Cynoglossus_semilaevis
ENSCATG00000032174	USB1	85	50.000	ENSCVAG00000009252	usb1	97	50.439	Cyprinodon_variegatus
ENSCATG00000032174	USB1	94	46.988	ENSDARG00000003841	usb1	87	48.536	Danio_rerio
ENSCATG00000032174	USB1	100	83.774	ENSDORG00000001888	Usb1	100	83.774	Dipodomys_ordii
ENSCATG00000032174	USB1	86	39.076	FBgn0037713	CG16790	88	39.076	Drosophila_melanogaster
ENSCATG00000032174	USB1	96	75.163	ENSETEG00000019682	USB1	100	70.037	Echinops_telfairi
ENSCATG00000032174	USB1	84	50.901	ENSEBUG00000005889	usb1	78	50.901	Eptatretus_burgeri
ENSCATG00000032174	USB1	100	86.792	ENSEASG00005005484	USB1	100	86.792	Equus_asinus_asinus
ENSCATG00000032174	USB1	100	87.547	ENSECAG00000019493	USB1	91	87.547	Equus_caballus
ENSCATG00000032174	USB1	66	79.545	ENSEEUG00000000154	USB1	66	79.545	Erinaceus_europaeus
ENSCATG00000032174	USB1	86	50.000	ENSELUG00000010974	usb1	84	50.000	Esox_lucius
ENSCATG00000032174	USB1	100	86.142	ENSFCAG00000002693	USB1	100	86.142	Felis_catus
ENSCATG00000032174	USB1	85	67.257	ENSFALG00000006876	USB1	99	62.547	Ficedula_albicollis
ENSCATG00000032174	USB1	100	86.142	ENSFDAG00000010052	USB1	100	85.393	Fukomys_damarensis
ENSCATG00000032174	USB1	92	45.732	ENSFHEG00000012334	usb1	78	53.061	Fundulus_heteroclitus
ENSCATG00000032174	USB1	84	51.121	ENSGMOG00000004228	usb1	99	51.121	Gadus_morhua
ENSCATG00000032174	USB1	84	67.857	ENSGALG00000035604	USB1	100	63.534	Gallus_gallus
ENSCATG00000032174	USB1	98	48.014	ENSGAFG00000021890	usb1	87	50.617	Gambusia_affinis
ENSCATG00000032174	USB1	85	52.212	ENSGACG00000003257	usb1	81	52.212	Gasterosteus_aculeatus
ENSCATG00000032174	USB1	100	64.234	ENSGAGG00000022572	USB1	100	63.004	Gopherus_agassizii
ENSCATG00000032174	USB1	100	96.604	ENSGGOG00000017147	USB1	100	96.604	Gorilla_gorilla
ENSCATG00000032174	USB1	94	51.004	ENSHBUG00000009823	usb1	81	53.744	Haplochromis_burtoni
ENSCATG00000032174	USB1	100	86.891	ENSHGLG00000016078	USB1	98	86.142	Heterocephalus_glaber_female
ENSCATG00000032174	USB1	100	86.891	ENSHGLG00100005562	USB1	98	86.142	Heterocephalus_glaber_male
ENSCATG00000032174	USB1	82	54.839	ENSHCOG00000015633	usb1	86	54.709	Hippocampus_comes
ENSCATG00000032174	USB1	85	54.018	ENSIPUG00000008601	usb1	78	54.018	Ictalurus_punctatus
ENSCATG00000032174	USB1	100	84.672	ENSSTOG00000007548	USB1	100	84.249	Ictidomys_tridecemlineatus
ENSCATG00000032174	USB1	100	85.821	ENSJJAG00000021859	Usb1	100	85.019	Jaculus_jaculus
ENSCATG00000032174	USB1	96	49.027	ENSKMAG00000007200	usb1	80	53.304	Kryptolebias_marmoratus
ENSCATG00000032174	USB1	75	52.261	ENSLBEG00000008452	usb1	64	53.158	Labrus_bergylta
ENSCATG00000032174	USB1	94	51.923	ENSLACG00000000105	USB1	73	60.000	Latimeria_chalumnae
ENSCATG00000032174	USB1	95	53.360	ENSLOCG00000000465	usb1	88	54.217	Lepisosteus_oculatus
ENSCATG00000032174	USB1	100	65.314	ENSLAFG00000002267	USB1	100	65.185	Loxodonta_africana
ENSCATG00000032174	USB1	100	99.623	ENSMFAG00000003926	USB1	100	99.623	Macaca_fascicularis
ENSCATG00000032174	USB1	100	99.623	ENSMMUG00000022669	USB1	100	99.623	Macaca_mulatta
ENSCATG00000032174	USB1	100	99.367	ENSMNEG00000042487	USB1	100	99.367	Macaca_nemestrina
ENSCATG00000032174	USB1	100	99.623	ENSMLEG00000028756	USB1	100	99.623	Mandrillus_leucophaeus
ENSCATG00000032174	USB1	98	48.375	ENSMAMG00000015092	usb1	83	52.361	Mastacembelus_armatus
ENSCATG00000032174	USB1	94	50.201	ENSMZEG00005010008	usb1	80	53.097	Maylandia_zebra
ENSCATG00000032174	USB1	100	84.644	ENSMAUG00000007832	Usb1	100	83.895	Mesocricetus_auratus
ENSCATG00000032174	USB1	100	91.139	ENSMICG00000004900	USB1	100	91.139	Microcebus_murinus
ENSCATG00000032174	USB1	100	84.328	ENSMOCG00000022647	Usb1	100	83.895	Microtus_ochrogaster
ENSCATG00000032174	USB1	85	53.125	ENSMMOG00000000490	usb1	87	53.125	Mola_mola
ENSCATG00000032174	USB1	100	69.403	ENSMODG00000014067	USB1	100	67.910	Monodelphis_domestica
ENSCATG00000032174	USB1	94	50.201	ENSMALG00000005930	usb1	80	53.304	Monopterus_albus
ENSCATG00000032174	USB1	100	81.273	MGP_CAROLIEiJ_G0031421	Usb1	100	84.071	Mus_caroli
ENSCATG00000032174	USB1	100	81.648	ENSMUSG00000031792	Usb1	100	84.956	Mus_musculus
ENSCATG00000032174	USB1	100	81.648	MGP_PahariEiJ_G0023019	Usb1	100	85.470	Mus_pahari
ENSCATG00000032174	USB1	100	80.899	MGP_SPRETEiJ_G0032540	Usb1	100	80.150	Mus_spretus
ENSCATG00000032174	USB1	100	82.156	ENSMPUG00000004684	USB1	96	81.784	Mustela_putorius_furo
ENSCATG00000032174	USB1	87	88.312	ENSMLUG00000007400	USB1	100	88.312	Myotis_lucifugus
ENSCATG00000032174	USB1	100	83.333	ENSNGAG00000009703	Usb1	100	82.900	Nannospalax_galili
ENSCATG00000032174	USB1	87	52.093	ENSNBRG00000008747	usb1	99	53.960	Neolamprologus_brichardi
ENSCATG00000032174	USB1	100	93.671	ENSNLEG00000003340	USB1	100	96.800	Nomascus_leucogenys
ENSCATG00000032174	USB1	94	61.290	ENSMEUG00000003328	-	100	61.290	Notamacropus_eugenii
ENSCATG00000032174	USB1	75	78.814	ENSOPRG00000011803	USB1	72	87.879	Ochotona_princeps
ENSCATG00000032174	USB1	100	82.397	ENSODEG00000016214	USB1	100	81.648	Octodon_degus
ENSCATG00000032174	USB1	98	47.872	ENSONIG00000011063	usb1	81	53.304	Oreochromis_niloticus
ENSCATG00000032174	USB1	88	73.077	ENSOANG00000012118	USB1	97	73.077	Ornithorhynchus_anatinus
ENSCATG00000032174	USB1	94	47.791	ENSORLG00000012479	usb1	83	50.439	Oryzias_latipes
ENSCATG00000032174	USB1	94	48.193	ENSORLG00020018671	usb1	99	47.778	Oryzias_latipes_hni
ENSCATG00000032174	USB1	86	50.877	ENSORLG00015009679	usb1	84	50.877	Oryzias_latipes_hsok
ENSCATG00000032174	USB1	85	50.442	ENSOMEG00000012930	usb1	82	50.000	Oryzias_melastigma
ENSCATG00000032174	USB1	100	87.449	ENSOGAG00000003273	USB1	100	87.449	Otolemur_garnettii
ENSCATG00000032174	USB1	95	82.609	ENSOARG00000001107	USB1	93	84.774	Ovis_aries
ENSCATG00000032174	USB1	100	96.226	ENSPPAG00000042137	USB1	100	96.226	Pan_paniscus
ENSCATG00000032174	USB1	100	86.142	ENSPPRG00000024797	USB1	100	86.142	Panthera_pardus
ENSCATG00000032174	USB1	100	86.142	ENSPTIG00000007506	USB1	100	86.142	Panthera_tigris_altaica
ENSCATG00000032174	USB1	100	95.547	ENSPTRG00000008172	USB1	100	97.664	Pan_troglodytes
ENSCATG00000032174	USB1	100	99.623	ENSPANG00000025138	USB1	100	99.623	Papio_anubis
ENSCATG00000032174	USB1	93	53.226	ENSPKIG00000015109	usb1	76	55.556	Paramormyrops_kingsleyae
ENSCATG00000032174	USB1	85	54.425	ENSPSIG00000004305	USB1	100	54.425	Pelodiscus_sinensis
ENSCATG00000032174	USB1	84	52.466	ENSPMGG00000017725	usb1	85	52.466	Periophthalmus_magnuspinnatus
ENSCATG00000032174	USB1	100	82.784	ENSPEMG00000016183	Usb1	100	80.147	Peromyscus_maniculatus_bairdii
ENSCATG00000032174	USB1	89	48.945	ENSPMAG00000000462	usb1	100	48.945	Petromyzon_marinus
ENSCATG00000032174	USB1	98	48.014	ENSPFOG00000011130	usb1	82	52.193	Poecilia_formosa
ENSCATG00000032174	USB1	98	48.014	ENSPLAG00000009820	usb1	82	52.193	Poecilia_latipinna
ENSCATG00000032174	USB1	98	48.014	ENSPMEG00000006402	usb1	82	52.193	Poecilia_mexicana
ENSCATG00000032174	USB1	92	43.558	ENSPREG00000001047	usb1	79	53.571	Poecilia_reticulata
ENSCATG00000032174	USB1	95	92.857	ENSPPYG00000007401	USB1	100	92.857	Pongo_abelii
ENSCATG00000032174	USB1	100	93.671	ENSPCOG00000022612	USB1	100	93.671	Propithecus_coquereli
ENSCATG00000032174	USB1	100	81.509	ENSPVAG00000004613	USB1	100	81.509	Pteropus_vampyrus
ENSCATG00000032174	USB1	94	51.515	ENSPNYG00000022262	usb1	81	53.744	Pundamilia_nyererei
ENSCATG00000032174	USB1	98	47.893	ENSPNAG00000011736	usb1	81	50.628	Pygocentrus_nattereri
ENSCATG00000032174	USB1	100	83.521	ENSRNOG00000013216	Usb1	100	82.772	Rattus_norvegicus
ENSCATG00000032174	USB1	100	98.381	ENSRBIG00000044466	USB1	100	99.533	Rhinopithecus_bieti
ENSCATG00000032174	USB1	100	98.491	ENSRROG00000029211	USB1	100	98.491	Rhinopithecus_roxellana
ENSCATG00000032174	USB1	100	94.340	ENSSBOG00000029362	USB1	100	94.340	Saimiri_boliviensis_boliviensis
ENSCATG00000032174	USB1	83	73.973	ENSSHAG00000006993	USB1	96	70.902	Sarcophilus_harrisii
ENSCATG00000032174	USB1	87	56.277	ENSSFOG00015023663	usb1	73	56.277	Scleropages_formosus
ENSCATG00000032174	USB1	98	49.275	ENSSMAG00000015834	usb1	99	48.299	Scophthalmus_maximus
ENSCATG00000032174	USB1	85	55.357	ENSSDUG00000002949	usb1	83	55.357	Seriola_dumerili
ENSCATG00000032174	USB1	98	49.807	ENSSLDG00000014174	usb1	80	54.867	Seriola_lalandi_dorsalis
ENSCATG00000032174	USB1	81	69.159	ENSSPUG00000006741	USB1	100	69.159	Sphenodon_punctatus
ENSCATG00000032174	USB1	98	46.528	ENSSPAG00000007484	usb1	80	52.423	Stegastes_partitus
ENSCATG00000032174	USB1	100	83.643	ENSSSCG00000002807	USB1	100	82.156	Sus_scrofa
ENSCATG00000032174	USB1	80	70.283	ENSTGUG00000004792	USB1	99	63.396	Taeniopygia_guttata
ENSCATG00000032174	USB1	98	48.507	ENSTRUG00000021069	usb1	86	50.215	Takifugu_rubripes
ENSCATG00000032174	USB1	98	46.154	ENSTNIG00000000626	usb1	83	48.661	Tetraodon_nigroviridis
ENSCATG00000032174	USB1	88	61.207	ENSTBEG00000001507	USB1	100	61.207	Tupaia_belangeri
ENSCATG00000032174	USB1	100	84.015	ENSUAMG00000016823	USB1	100	84.387	Ursus_americanus
ENSCATG00000032174	USB1	81	88.318	ENSUMAG00000021369	USB1	100	88.318	Ursus_maritimus
ENSCATG00000032174	USB1	96	51.656	ENSVPAG00000009834	-	59	88.333	Vicugna_pacos
ENSCATG00000032174	USB1	99	82.836	ENSVVUG00000023700	USB1	93	85.477	Vulpes_vulpes
ENSCATG00000032174	USB1	82	55.505	ENSXETG00000013795	usb1	90	55.111	Xenopus_tropicalis
ENSCATG00000032174	USB1	86	52.632	ENSXMAG00000024687	usb1	67	52.632	Xiphophorus_maculatus