EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000032227 (Gene tree)
Gene ID: 105572100
Gene Symbol: -
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 55682 bases
Position: chrKQ011696.1:1570583-1626264
Accession: 105572100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000016597	MMR_HSR1	PF01926.23	1.5e-08	1	1
ENSCATP00000016596	MMR_HSR1	PF01926.23	6.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000040758	-	6735	XM_012030327	ENSCATP00000016596	986 (aa)	XP_011885717	A0A2K5LUH3
ENSCATT00000040759	-	4242	XM_012030328	ENSCATP00000016597	473 (aa)	XP_011885718	A0A2K5LUI6

Gene Model

Click here to download ENSCATG00000032227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000032227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000032227	-	74	33.429	ENSCATG00000044604	EHD3	69	32.680
ENSCATG00000032227	-	77	33.699	ENSCATG00000010658	EHD1	79	33.699
ENSCATG00000032227	-	63	35.570	ENSCATG00000034221	EHD4	55	35.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000032227	-	100	99.789	ENSG00000185739	SRL	100	100.000	Homo_sapiens
ENSCATG00000032227	-	93	76.018	ENSAPOG00000012432	SRL	98	74.664	Acanthochromis_polyacanthus
ENSCATG00000032227	-	100	80.338	ENSAPOG00000018093	srl	100	82.658	Acanthochromis_polyacanthus
ENSCATG00000032227	-	98	96.112	ENSAMEG00000010862	SRL	99	66.324	Ailuropoda_melanoleuca
ENSCATG00000032227	-	96	81.898	ENSACIG00000015799	srl	100	81.898	Amphilophus_citrinellus
ENSCATG00000032227	-	94	75.225	ENSACIG00000015419	SRL	99	75.395	Amphilophus_citrinellus
ENSCATG00000032227	-	92	83.410	ENSAOCG00000007574	srl	100	83.410	Amphiprion_ocellaris
ENSCATG00000032227	-	96	73.904	ENSAOCG00000017049	SRL	99	73.904	Amphiprion_ocellaris
ENSCATG00000032227	-	100	80.550	ENSAPEG00000006911	srl	96	82.379	Amphiprion_percula
ENSCATG00000032227	-	96	70.110	ENSAPEG00000006533	SRL	99	70.110	Amphiprion_percula
ENSCATG00000032227	-	93	73.407	ENSATEG00000009643	SRL	52	73.407	Anabas_testudineus
ENSCATG00000032227	-	100	79.704	ENSATEG00000024315	srl	97	81.538	Anabas_testudineus
ENSCATG00000032227	-	93	89.845	ENSACAG00000016380	SRL	86	87.872	Anolis_carolinensis
ENSCATG00000032227	-	98	81.075	ENSACLG00000027685	srl	97	83.032	Astatotilapia_calliptera
ENSCATG00000032227	-	93	72.747	ENSACLG00000024674	SRL	55	74.201	Astatotilapia_calliptera
ENSCATG00000032227	-	92	73.853	ENSAMXG00000038693	SRL	100	73.510	Astyanax_mexicanus
ENSCATG00000032227	-	99	80.508	ENSAMXG00000018789	srl	87	83.559	Astyanax_mexicanus
ENSCATG00000032227	-	96	95.824	ENSBTAG00000001078	SRL	99	83.099	Bos_taurus
ENSCATG00000032227	-	100	99.154	ENSCJAG00000019750	SRL	100	99.154	Callithrix_jacchus
ENSCATG00000032227	-	97	96.095	ENSCAFG00000019233	SRL	98	86.817	Canis_familiaris
ENSCATG00000032227	-	96	97.130	ENSCAFG00020025024	SRL	98	62.254	Canis_lupus_dingo
ENSCATG00000032227	-	97	95.652	ENSCHIG00000017927	SRL	98	79.538	Capra_hircus
ENSCATG00000032227	-	100	97.674	ENSTSYG00000007919	SRL	100	98.608	Carlito_syrichta
ENSCATG00000032227	-	100	96.617	ENSCPOG00000012643	SRL	100	96.617	Cavia_porcellus
ENSCATG00000032227	-	100	93.235	ENSCCAG00000032646	SRL	100	99.472	Cebus_capucinus
ENSCATG00000032227	-	100	96.406	ENSCLAG00000016242	SRL	100	96.406	Chinchilla_lanigera
ENSCATG00000032227	-	96	100.000	ENSCSAG00000009635	-	100	95.335	Chlorocebus_sabaeus
ENSCATG00000032227	-	81	97.662	ENSCHOG00000001618	SRL	89	97.662	Choloepus_hoffmanni
ENSCATG00000032227	-	96	93.523	ENSCPBG00000026371	SRL	97	88.699	Chrysemys_picta_bellii
ENSCATG00000032227	-	93	58.409	ENSCING00000005231	-	93	59.338	Ciona_intestinalis
ENSCATG00000032227	-	100	99.789	ENSCANG00000035872	SRL	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000032227	-	96	96.909	ENSCGRG00001016630	Srl	100	96.195	Cricetulus_griseus_chok1gshd
ENSCATG00000032227	-	96	96.909	ENSCGRG00000005458	Srl	100	96.195	Cricetulus_griseus_crigri
ENSCATG00000032227	-	100	79.915	ENSCSEG00000016151	srl	96	82.000	Cynoglossus_semilaevis
ENSCATG00000032227	-	99	69.831	ENSCSEG00000011866	SRL	89	72.686	Cynoglossus_semilaevis
ENSCATG00000032227	-	93	74.779	ENSCVAG00000022465	SRL	60	74.779	Cyprinodon_variegatus
ENSCATG00000032227	-	93	83.937	ENSCVAG00000003513	srl	96	83.937	Cyprinodon_variegatus
ENSCATG00000032227	-	100	81.184	ENSDARG00000104587	srl	98	82.135	Danio_rerio
ENSCATG00000032227	-	80	76.562	ENSDARG00000112959	CABZ01072309.1	100	76.562	Danio_rerio
ENSCATG00000032227	-	96	97.368	ENSDNOG00000011643	SRL	100	78.120	Dasypus_novemcinctus
ENSCATG00000032227	-	97	96.061	ENSDORG00000014807	Srl	100	95.560	Dipodomys_ordii
ENSCATG00000032227	-	77	65.508	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSCATG00000032227	-	96	96.264	ENSEASG00005000942	SRL	99	75.749	Equus_asinus_asinus
ENSCATG00000032227	-	99	95.975	ENSECAG00000024219	SRL	99	95.975	Equus_caballus
ENSCATG00000032227	-	100	77.207	ENSELUG00000015616	srl	97	79.574	Esox_lucius
ENSCATG00000032227	-	100	95.560	ENSFCAG00000022075	SRL	100	95.560	Felis_catus
ENSCATG00000032227	-	96	90.487	ENSFALG00000004328	SRL	91	71.846	Ficedula_albicollis
ENSCATG00000032227	-	100	96.406	ENSFDAG00000006199	SRL	100	96.406	Fukomys_damarensis
ENSCATG00000032227	-	93	75.339	ENSFHEG00000011854	SRL	98	76.417	Fundulus_heteroclitus
ENSCATG00000032227	-	100	79.915	ENSFHEG00000011239	srl	98	80.087	Fundulus_heteroclitus
ENSCATG00000032227	-	93	81.678	ENSGMOG00000014954	srl	99	81.678	Gadus_morhua
ENSCATG00000032227	-	99	89.195	ENSGALG00000038884	SRL	96	90.508	Gallus_gallus
ENSCATG00000032227	-	100	79.915	ENSGAFG00000000010	srl	97	82.472	Gambusia_affinis
ENSCATG00000032227	-	93	76.244	ENSGAFG00000016984	SRL	98	76.244	Gambusia_affinis
ENSCATG00000032227	-	93	80.795	ENSGACG00000011332	srl	99	80.795	Gasterosteus_aculeatus
ENSCATG00000032227	-	100	99.577	ENSGGOG00000011312	-	100	99.577	Gorilla_gorilla
ENSCATG00000032227	-	93	72.527	ENSHBUG00000015710	SRL	57	72.527	Haplochromis_burtoni
ENSCATG00000032227	-	98	81.075	ENSHBUG00000007581	srl	97	83.032	Haplochromis_burtoni
ENSCATG00000032227	-	100	97.252	ENSHGLG00000015271	SRL	100	97.252	Heterocephalus_glaber_female
ENSCATG00000032227	-	100	97.252	ENSHGLG00100019378	SRL	100	97.252	Heterocephalus_glaber_male
ENSCATG00000032227	-	95	72.331	ENSHCOG00000001012	SRL	51	72.331	Hippocampus_comes
ENSCATG00000032227	-	99	79.618	ENSHCOG00000008687	srl	98	82.805	Hippocampus_comes
ENSCATG00000032227	-	100	79.281	ENSIPUG00000012513	srl	100	79.281	Ictalurus_punctatus
ENSCATG00000032227	-	92	70.183	ENSIPUG00000011609	SRL	95	69.037	Ictalurus_punctatus
ENSCATG00000032227	-	100	96.406	ENSSTOG00000021151	-	100	96.406	Ictidomys_tridecemlineatus
ENSCATG00000032227	-	100	95.560	ENSJJAG00000016400	Srl	96	96.681	Jaculus_jaculus
ENSCATG00000032227	-	93	76.417	ENSKMAG00000019537	SRL	100	76.417	Kryptolebias_marmoratus
ENSCATG00000032227	-	98	79.654	ENSKMAG00000014115	srl	93	84.561	Kryptolebias_marmoratus
ENSCATG00000032227	-	96	74.342	ENSLBEG00000013811	SRL	98	74.123	Labrus_bergylta
ENSCATG00000032227	-	100	79.915	ENSLBEG00000026643	srl	97	81.099	Labrus_bergylta
ENSCATG00000032227	-	96	85.430	ENSLACG00000002825	SRL	100	85.430	Latimeria_chalumnae
ENSCATG00000032227	-	99	83.191	ENSLOCG00000002644	srl	97	84.581	Lepisosteus_oculatus
ENSCATG00000032227	-	96	96.909	ENSLAFG00000006329	SRL	73	79.310	Loxodonta_africana
ENSCATG00000032227	-	91	100.000	ENSMFAG00000037383	SRL	100	100.000	Macaca_fascicularis
ENSCATG00000032227	-	100	96.242	ENSMNEG00000019236	-	100	96.242	Macaca_nemestrina
ENSCATG00000032227	-	100	91.966	ENSMLEG00000032156	SRL	100	91.966	Mandrillus_leucophaeus
ENSCATG00000032227	-	93	74.009	ENSMAMG00000013756	SRL	53	73.904	Mastacembelus_armatus
ENSCATG00000032227	-	93	83.484	ENSMAMG00000023322	srl	94	83.484	Mastacembelus_armatus
ENSCATG00000032227	-	98	81.075	ENSMZEG00005004548	srl	97	83.032	Maylandia_zebra
ENSCATG00000032227	-	93	72.747	ENSMZEG00005004010	SRL	62	67.387	Maylandia_zebra
ENSCATG00000032227	-	96	89.693	ENSMGAG00000009342	SRL	95	92.308	Meleagris_gallopavo
ENSCATG00000032227	-	100	95.983	ENSMICG00000032307	SRL	100	95.983	Microcebus_murinus
ENSCATG00000032227	-	100	95.772	ENSMOCG00000008208	Srl	100	95.772	Microtus_ochrogaster
ENSCATG00000032227	-	93	72.747	ENSMMOG00000021572	SRL	99	72.747	Mola_mola
ENSCATG00000032227	-	93	82.579	ENSMMOG00000013970	srl	98	82.579	Mola_mola
ENSCATG00000032227	-	96	95.796	ENSMODG00000016380	-	92	88.911	Monodelphis_domestica
ENSCATG00000032227	-	89	76.134	ENSMALG00000000670	SRL	98	75.359	Monopterus_albus
ENSCATG00000032227	-	95	82.222	ENSMALG00000005039	srl	99	82.222	Monopterus_albus
ENSCATG00000032227	-	97	96.499	MGP_CAROLIEiJ_G0020400	Srl	100	95.772	Mus_caroli
ENSCATG00000032227	-	97	96.499	ENSMUSG00000022519	Srl	100	95.772	Mus_musculus
ENSCATG00000032227	-	96	96.264	MGP_PahariEiJ_G0016108	Srl	100	67.101	Mus_pahari
ENSCATG00000032227	-	97	96.499	MGP_SPRETEiJ_G0021294	Srl	100	95.772	Mus_spretus
ENSCATG00000032227	-	97	96.070	ENSMPUG00000015025	SRL	97	87.004	Mustela_putorius_furo
ENSCATG00000032227	-	98	94.839	ENSMLUG00000030733	SRL	99	80.261	Myotis_lucifugus
ENSCATG00000032227	-	97	96.499	ENSNGAG00000019741	Srl	100	95.772	Nannospalax_galili
ENSCATG00000032227	-	98	81.075	ENSNBRG00000023775	srl	97	81.619	Neolamprologus_brichardi
ENSCATG00000032227	-	93	72.747	ENSNBRG00000002422	SRL	80	56.889	Neolamprologus_brichardi
ENSCATG00000032227	-	100	92.812	ENSNLEG00000029051	SRL	100	92.812	Nomascus_leucogenys
ENSCATG00000032227	-	96	90.066	ENSOPRG00000000477	-	100	75.164	Ochotona_princeps
ENSCATG00000032227	-	97	96.937	ENSODEG00000013256	SRL	100	96.406	Octodon_degus
ENSCATG00000032227	-	100	79.704	ENSONIG00000005192	srl	97	81.004	Oreochromis_niloticus
ENSCATG00000032227	-	96	97.351	ENSOCUG00000025140	SRL	98	67.178	Oryctolagus_cuniculus
ENSCATG00000032227	-	96	73.407	ENSORLG00000015064	SRL	99	73.894	Oryzias_latipes
ENSCATG00000032227	-	100	79.493	ENSORLG00000008291	srl	92	84.794	Oryzias_latipes
ENSCATG00000032227	-	96	73.626	ENSORLG00020018173	SRL	99	74.115	Oryzias_latipes_hni
ENSCATG00000032227	-	100	79.281	ENSORLG00020019784	srl	79	84.755	Oryzias_latipes_hni
ENSCATG00000032227	-	96	74.009	ENSORLG00015019063	SRL	99	74.336	Oryzias_latipes_hsok
ENSCATG00000032227	-	100	78.858	ENSORLG00015009342	srl	93	80.488	Oryzias_latipes_hsok
ENSCATG00000032227	-	94	72.648	ENSOMEG00000005682	SRL	74	58.485	Oryzias_melastigma
ENSCATG00000032227	-	100	79.070	ENSOMEG00000010006	srl	98	82.045	Oryzias_melastigma
ENSCATG00000032227	-	96	96.026	ENSOGAG00000029266	SRL	99	82.669	Otolemur_garnettii
ENSCATG00000032227	-	97	95.652	ENSOARG00000003074	SRL	84	95.186	Ovis_aries
ENSCATG00000032227	-	100	99.366	ENSPPAG00000024919	-	100	99.768	Pan_paniscus
ENSCATG00000032227	-	100	95.772	ENSPPRG00000010274	SRL	100	97.680	Panthera_pardus
ENSCATG00000032227	-	100	95.772	ENSPTIG00000015162	SRL	100	97.680	Panthera_tigris_altaica
ENSCATG00000032227	-	100	99.577	ENSPTRG00000007712	SRL	100	99.768	Pan_troglodytes
ENSCATG00000032227	-	99	97.665	ENSPANG00000013804	SRL	100	97.665	Papio_anubis
ENSCATG00000032227	-	100	73.996	ENSPKIG00000024974	SRL	91	75.546	Paramormyrops_kingsleyae
ENSCATG00000032227	-	98	82.618	ENSPKIG00000006405	srl	97	82.789	Paramormyrops_kingsleyae
ENSCATG00000032227	-	96	90.929	ENSPSIG00000008586	SRL	99	57.825	Pelodiscus_sinensis
ENSCATG00000032227	-	93	72.624	ENSPMGG00000023505	-	99	72.072	Periophthalmus_magnuspinnatus
ENSCATG00000032227	-	96	83.407	ENSPMGG00000021081	srl	97	83.407	Periophthalmus_magnuspinnatus
ENSCATG00000032227	-	96	96.491	ENSPEMG00000015842	Srl	100	95.772	Peromyscus_maniculatus_bairdii
ENSCATG00000032227	-	89	67.431	ENSPMAG00000004786	srl	99	67.202	Petromyzon_marinus
ENSCATG00000032227	-	96	95.575	ENSPCIG00000012128	SRL	99	95.575	Phascolarctos_cinereus
ENSCATG00000032227	-	100	77.938	ENSPFOG00000011408	srl	94	80.482	Poecilia_formosa
ENSCATG00000032227	-	98	80.172	ENSPLAG00000008017	srl	97	82.247	Poecilia_latipinna
ENSCATG00000032227	-	93	75.792	ENSPLAG00000002932	SRL	98	74.830	Poecilia_latipinna
ENSCATG00000032227	-	96	71.975	ENSPMEG00000005890	SRL	59	73.846	Poecilia_mexicana
ENSCATG00000032227	-	100	79.704	ENSPMEG00000006745	srl	97	82.247	Poecilia_mexicana
ENSCATG00000032227	-	93	76.923	ENSPREG00000000315	SRL	98	75.964	Poecilia_reticulata
ENSCATG00000032227	-	100	79.493	ENSPREG00000007751	srl	100	81.596	Poecilia_reticulata
ENSCATG00000032227	-	89	100.000	ENSPPYG00000007053	SRL	98	100.000	Pongo_abelii
ENSCATG00000032227	-	96	95.575	ENSPCAG00000003378	-	86	91.165	Procavia_capensis
ENSCATG00000032227	-	100	96.195	ENSPCOG00000023135	SRL	100	97.912	Propithecus_coquereli
ENSCATG00000032227	-	96	97.351	ENSPVAG00000006586	SRL	100	78.049	Pteropus_vampyrus
ENSCATG00000032227	-	98	81.075	ENSPNYG00000001200	srl	97	83.032	Pundamilia_nyererei
ENSCATG00000032227	-	93	72.747	ENSPNYG00000003423	SRL	57	71.648	Pundamilia_nyererei
ENSCATG00000032227	-	100	78.858	ENSPNAG00000023106	srl	95	82.022	Pygocentrus_nattereri
ENSCATG00000032227	-	97	74.026	ENSPNAG00000007361	-	92	75.056	Pygocentrus_nattereri
ENSCATG00000032227	-	96	96.247	ENSRNOG00000005269	Srl	100	67.470	Rattus_norvegicus
ENSCATG00000032227	-	96	100.000	ENSRBIG00000042358	SRL	100	78.406	Rhinopithecus_bieti
ENSCATG00000032227	-	100	99.154	ENSSBOG00000029273	SRL	100	99.154	Saimiri_boliviensis_boliviensis
ENSCATG00000032227	-	97	94.967	ENSSHAG00000011715	-	99	60.183	Sarcophilus_harrisii
ENSCATG00000032227	-	100	79.175	ENSSFOG00015009773	srl	97	83.260	Scleropages_formosus
ENSCATG00000032227	-	93	77.149	ENSSFOG00015021327	SRL	51	75.877	Scleropages_formosus
ENSCATG00000032227	-	93	82.579	ENSSMAG00000016274	srl	97	82.579	Scophthalmus_maximus
ENSCATG00000032227	-	93	73.523	ENSSMAG00000002232	SRL	50	72.527	Scophthalmus_maximus
ENSCATG00000032227	-	93	83.484	ENSSDUG00000010808	srl	97	83.484	Seriola_dumerili
ENSCATG00000032227	-	93	74.833	ENSSDUG00000009161	SRL	98	75.000	Seriola_dumerili
ENSCATG00000032227	-	93	74.398	ENSSLDG00000014601	SRL	99	74.561	Seriola_lalandi_dorsalis
ENSCATG00000032227	-	93	83.484	ENSSLDG00000022024	srl	95	83.484	Seriola_lalandi_dorsalis
ENSCATG00000032227	-	96	89.845	ENSSPUG00000016859	SRL	99	89.845	Sphenodon_punctatus
ENSCATG00000032227	-	93	75.737	ENSSPAG00000014254	SRL	98	74.773	Stegastes_partitus
ENSCATG00000032227	-	100	80.550	ENSSPAG00000019105	srl	96	82.301	Stegastes_partitus
ENSCATG00000032227	-	96	96.264	ENSSSCG00000007949	SRL	99	96.875	Sus_scrofa
ENSCATG00000032227	-	77	91.989	ENSTGUG00000016121	-	96	92.816	Taeniopygia_guttata
ENSCATG00000032227	-	96	90.265	ENSTGUG00000003951	-	99	90.265	Taeniopygia_guttata
ENSCATG00000032227	-	100	80.338	ENSTRUG00000006005	srl	96	81.596	Takifugu_rubripes
ENSCATG00000032227	-	89	75.179	ENSTRUG00000013310	SRL	82	57.669	Takifugu_rubripes
ENSCATG00000032227	-	95	81.375	ENSTNIG00000009739	srl	96	81.375	Tetraodon_nigroviridis
ENSCATG00000032227	-	93	96.591	ENSTTRG00000002709	-	69	96.591	Tursiops_truncatus
ENSCATG00000032227	-	96	96.484	ENSUAMG00000005701	SRL	98	81.726	Ursus_americanus
ENSCATG00000032227	-	96	96.703	ENSUMAG00000002574	SRL	98	81.895	Ursus_maritimus
ENSCATG00000032227	-	96	96.711	ENSVVUG00000016331	-	87	85.714	Vulpes_vulpes
ENSCATG00000032227	-	98	87.257	ENSXETG00000017313	srl	100	88.717	Xenopus_tropicalis
ENSCATG00000032227	-	89	84.561	ENSXCOG00000010424	srl	97	84.561	Xiphophorus_couchianus
ENSCATG00000032227	-	95	74.945	ENSXCOG00000014584	SRL	100	74.945	Xiphophorus_couchianus
ENSCATG00000032227	-	100	80.127	ENSXMAG00000004625	srl	93	80.786	Xiphophorus_maculatus
ENSCATG00000032227	-	97	72.340	ENSXMAG00000027598	SRL	62	74.505	Xiphophorus_maculatus