EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000032679 (Gene tree)
Gene ID: 105597393
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 131572 bases
Position: chrKQ010842.1:14615862-14747433
Accession: 105597393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000017665	Upf2	PF04050.14	8.8e-33	1	1
ENSCATP00000017677	Upf2	PF04050.14	1.3e-32	1	1
ENSCATP00000017677	MIF4G	PF02854.19	1.7e-80	1	3
ENSCATP00000017677	MIF4G	PF02854.19	1.7e-80	2	3
ENSCATP00000017677	MIF4G	PF02854.19	1.7e-80	3	3
ENSCATP00000017665	MIF4G	PF02854.19	1.7e-80	1	3
ENSCATP00000017665	MIF4G	PF02854.19	1.7e-80	2	3
ENSCATP00000017665	MIF4G	PF02854.19	1.7e-80	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000041832	UPF2-201	7793	XM_012085648	ENSCATP00000017665	1272 (aa)	XP_011941038	A0A2K5LXJ5
ENSCATT00000041844	UPF2-202	3789	-	ENSCATP00000017677	1262 (aa)	-	A0A2K5LXK1

Gene Model

Click here to download ENSCATG00000032679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000032679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000032679	UPF2	100	99.607	ENSG00000151461	UPF2	100	99.607	Homo_sapiens
ENSCATG00000032679	UPF2	99	78.482	ENSAPOG00000015837	UPF2	100	78.326	Acanthochromis_polyacanthus
ENSCATG00000032679	UPF2	100	97.877	ENSAMEG00000004586	UPF2	100	97.877	Ailuropoda_melanoleuca
ENSCATG00000032679	UPF2	99	82.592	ENSACIG00000018078	UPF2	100	82.514	Amphilophus_citrinellus
ENSCATG00000032679	UPF2	100	82.619	ENSAOCG00000016766	UPF2	100	82.697	Amphiprion_ocellaris
ENSCATG00000032679	UPF2	100	82.697	ENSAPEG00000019084	UPF2	100	82.775	Amphiprion_percula
ENSCATG00000032679	UPF2	100	82.517	ENSATEG00000021677	UPF2	99	82.724	Anabas_testudineus
ENSCATG00000032679	UPF2	100	86.792	ENSAPLG00000010287	UPF2	100	86.321	Anas_platyrhynchos
ENSCATG00000032679	UPF2	100	92.060	ENSACAG00000009259	UPF2	100	92.060	Anolis_carolinensis
ENSCATG00000032679	UPF2	99	88.679	ENSANAG00000028451	UPF2	99	87.343	Aotus_nancymaae
ENSCATG00000032679	UPF2	100	81.060	ENSACLG00000012696	UPF2	100	82.775	Astatotilapia_calliptera
ENSCATG00000032679	UPF2	99	82.486	ENSAMXG00000013700	UPF2	99	82.877	Astyanax_mexicanus
ENSCATG00000032679	UPF2	100	97.799	ENSBTAG00000000288	UPF2	100	97.799	Bos_taurus
ENSCATG00000032679	UPF2	62	30.184	WBGene00004881	smg-3	69	30.061	Caenorhabditis_elegans
ENSCATG00000032679	UPF2	100	99.292	ENSCJAG00000020685	UPF2	100	99.292	Callithrix_jacchus
ENSCATG00000032679	UPF2	100	97.877	ENSCAFG00000004839	UPF2	100	97.877	Canis_familiaris
ENSCATG00000032679	UPF2	100	96.355	ENSCAFG00020005882	UPF2	100	96.355	Canis_lupus_dingo
ENSCATG00000032679	UPF2	100	97.877	ENSCHIG00000020359	UPF2	100	97.877	Capra_hircus
ENSCATG00000032679	UPF2	100	98.035	ENSTSYG00000000935	UPF2	100	98.035	Carlito_syrichta
ENSCATG00000032679	UPF2	91	87.360	ENSCAPG00000016658	UPF2	100	86.367	Cavia_aperea
ENSCATG00000032679	UPF2	99	95.642	ENSCPOG00000008809	UPF2	99	95.642	Cavia_porcellus
ENSCATG00000032679	UPF2	100	93.711	ENSCCAG00000035991	UPF2	100	93.711	Cebus_capucinus
ENSCATG00000032679	UPF2	100	97.327	ENSCLAG00000011434	UPF2	100	97.327	Chinchilla_lanigera
ENSCATG00000032679	UPF2	100	99.921	ENSCSAG00000013372	UPF2	100	99.921	Chlorocebus_sabaeus
ENSCATG00000032679	UPF2	87	99.554	ENSCHOG00000000422	UPF2	89	99.554	Choloepus_hoffmanni
ENSCATG00000032679	UPF2	99	92.756	ENSCPBG00000027823	UPF2	100	92.598	Chrysemys_picta_bellii
ENSCATG00000032679	UPF2	79	48.963	ENSCSAVG00000007772	-	79	50.446	Ciona_savignyi
ENSCATG00000032679	UPF2	100	96.754	ENSCANG00000040396	UPF2	100	96.754	Colobus_angolensis_palliatus
ENSCATG00000032679	UPF2	100	97.563	ENSCGRG00001019347	Upf2	100	97.563	Cricetulus_griseus_chok1gshd
ENSCATG00000032679	UPF2	100	97.563	ENSCGRG00000017993	Upf2	100	97.563	Cricetulus_griseus_crigri
ENSCATG00000032679	UPF2	91	80.723	ENSCSEG00000003520	UPF2	99	77.891	Cynoglossus_semilaevis
ENSCATG00000032679	UPF2	99	82.182	ENSCVAG00000006167	UPF2	100	81.947	Cyprinodon_variegatus
ENSCATG00000032679	UPF2	100	97.877	ENSDNOG00000018160	UPF2	100	97.877	Dasypus_novemcinctus
ENSCATG00000032679	UPF2	100	97.170	ENSDORG00000002478	Upf2	100	97.170	Dipodomys_ordii
ENSCATG00000032679	UPF2	89	36.439	FBgn0029992	Upf2	82	43.860	Drosophila_melanogaster
ENSCATG00000032679	UPF2	72	100.000	ENSETEG00000011583	-	72	100.000	Echinops_telfairi
ENSCATG00000032679	UPF2	65	72.483	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSCATG00000032679	UPF2	100	97.877	ENSEASG00005019274	UPF2	100	99.383	Equus_asinus_asinus
ENSCATG00000032679	UPF2	100	97.956	ENSECAG00000017022	UPF2	100	97.956	Equus_caballus
ENSCATG00000032679	UPF2	82	95.208	ENSEEUG00000007819	UPF2	82	95.208	Erinaceus_europaeus
ENSCATG00000032679	UPF2	99	81.499	ENSELUG00000012014	UPF2	100	81.832	Esox_lucius
ENSCATG00000032679	UPF2	100	99.448	ENSFCAG00000005785	UPF2	100	97.720	Felis_catus
ENSCATG00000032679	UPF2	100	91.352	ENSFALG00000001889	UPF2	98	93.160	Ficedula_albicollis
ENSCATG00000032679	UPF2	100	97.170	ENSFDAG00000014348	UPF2	100	97.170	Fukomys_damarensis
ENSCATG00000032679	UPF2	99	82.418	ENSFHEG00000009826	UPF2	100	82.311	Fundulus_heteroclitus
ENSCATG00000032679	UPF2	91	83.938	ENSGMOG00000005557	UPF2	100	80.187	Gadus_morhua
ENSCATG00000032679	UPF2	100	93.480	ENSGALG00000033772	UPF2	100	93.480	Gallus_gallus
ENSCATG00000032679	UPF2	100	79.579	ENSGAFG00000020867	UPF2	100	81.606	Gambusia_affinis
ENSCATG00000032679	UPF2	90	84.383	ENSGACG00000001080	UPF2	100	82.201	Gasterosteus_aculeatus
ENSCATG00000032679	UPF2	100	92.925	ENSGAGG00000002700	UPF2	100	92.925	Gopherus_agassizii
ENSCATG00000032679	UPF2	100	99.686	ENSGGOG00000001479	UPF2	100	99.686	Gorilla_gorilla
ENSCATG00000032679	UPF2	100	80.904	ENSHBUG00000004249	UPF2	100	82.748	Haplochromis_burtoni
ENSCATG00000032679	UPF2	99	85.917	ENSHGLG00000003822	-	99	85.051	Heterocephalus_glaber_female
ENSCATG00000032679	UPF2	100	97.248	ENSHGLG00000015176	-	100	97.248	Heterocephalus_glaber_female
ENSCATG00000032679	UPF2	99	93.071	ENSHGLG00100010036	UPF2	100	90.754	Heterocephalus_glaber_male
ENSCATG00000032679	UPF2	100	80.590	ENSHCOG00000004025	UPF2	99	80.590	Hippocampus_comes
ENSCATG00000032679	UPF2	100	81.528	ENSIPUG00000015524	UPF2	100	81.825	Ictalurus_punctatus
ENSCATG00000032679	UPF2	100	97.642	ENSSTOG00000013075	UPF2	100	97.642	Ictidomys_tridecemlineatus
ENSCATG00000032679	UPF2	100	96.462	ENSJJAG00000004913	Upf2	100	96.462	Jaculus_jaculus
ENSCATG00000032679	UPF2	99	82.081	ENSKMAG00000001071	UPF2	100	82.353	Kryptolebias_marmoratus
ENSCATG00000032679	UPF2	80	82.237	ENSLBEG00000000728	-	93	82.336	Labrus_bergylta
ENSCATG00000032679	UPF2	100	82.764	ENSLBEG00000016394	-	99	82.815	Labrus_bergylta
ENSCATG00000032679	UPF2	99	77.743	ENSLACG00000015945	UPF2	100	79.327	Latimeria_chalumnae
ENSCATG00000032679	UPF2	99	84.646	ENSLOCG00000015698	UPF2	100	85.984	Lepisosteus_oculatus
ENSCATG00000032679	UPF2	100	99.921	ENSMFAG00000043865	UPF2	100	99.921	Macaca_fascicularis
ENSCATG00000032679	UPF2	100	99.921	ENSMMUG00000008241	UPF2	100	99.921	Macaca_mulatta
ENSCATG00000032679	UPF2	81	99.610	ENSMNEG00000008062	UPF2	100	99.610	Macaca_nemestrina
ENSCATG00000032679	UPF2	100	100.000	ENSMLEG00000036120	UPF2	100	100.000	Mandrillus_leucophaeus
ENSCATG00000032679	UPF2	100	82.284	ENSMAMG00000018276	UPF2	100	82.412	Mastacembelus_armatus
ENSCATG00000032679	UPF2	100	81.060	ENSMZEG00005021595	UPF2	100	82.775	Maylandia_zebra
ENSCATG00000032679	UPF2	99	92.846	ENSMGAG00000004573	UPF2	99	92.846	Meleagris_gallopavo
ENSCATG00000032679	UPF2	100	95.204	ENSMAUG00000016512	Upf2	100	95.204	Mesocricetus_auratus
ENSCATG00000032679	UPF2	100	93.502	ENSMICG00000001716	UPF2	100	94.094	Microcebus_murinus
ENSCATG00000032679	UPF2	100	96.934	ENSMOCG00000008263	Upf2	100	96.934	Microtus_ochrogaster
ENSCATG00000032679	UPF2	99	80.016	ENSMMOG00000006528	UPF2	100	80.282	Mola_mola
ENSCATG00000032679	UPF2	100	95.597	ENSMODG00000016794	UPF2	100	95.597	Monodelphis_domestica
ENSCATG00000032679	UPF2	99	82.188	ENSMALG00000002663	UPF2	100	82.160	Monopterus_albus
ENSCATG00000032679	UPF2	100	97.170	MGP_CAROLIEiJ_G0023157	Upf2	100	98.476	Mus_caroli
ENSCATG00000032679	UPF2	100	97.170	ENSMUSG00000043241	Upf2	100	97.170	Mus_musculus
ENSCATG00000032679	UPF2	100	96.777	MGP_PahariEiJ_G0019217	Upf2	100	97.524	Mus_pahari
ENSCATG00000032679	UPF2	100	97.406	MGP_SPRETEiJ_G0024075	Upf2	100	97.905	Mus_spretus
ENSCATG00000032679	UPF2	100	97.877	ENSMPUG00000001064	UPF2	100	97.877	Mustela_putorius_furo
ENSCATG00000032679	UPF2	99	97.174	ENSMLUG00000000228	UPF2	100	97.174	Myotis_lucifugus
ENSCATG00000032679	UPF2	100	81.060	ENSNBRG00000013629	UPF2	100	82.775	Neolamprologus_brichardi
ENSCATG00000032679	UPF2	100	99.607	ENSNLEG00000012058	UPF2	100	99.607	Nomascus_leucogenys
ENSCATG00000032679	UPF2	61	97.927	ENSMEUG00000002180	-	60	97.927	Notamacropus_eugenii
ENSCATG00000032679	UPF2	76	100.000	ENSOPRG00000006801	-	78	100.000	Ochotona_princeps
ENSCATG00000032679	UPF2	100	96.777	ENSODEG00000001290	UPF2	100	96.777	Octodon_degus
ENSCATG00000032679	UPF2	100	81.138	ENSONIG00000017991	UPF2	100	82.853	Oreochromis_niloticus
ENSCATG00000032679	UPF2	99	97.181	ENSOCUG00000006230	UPF2	100	97.181	Oryctolagus_cuniculus
ENSCATG00000032679	UPF2	100	81.260	ENSORLG00000017189	UPF2	100	81.995	Oryzias_latipes
ENSCATG00000032679	UPF2	100	81.260	ENSORLG00020005969	UPF2	100	81.995	Oryzias_latipes_hni
ENSCATG00000032679	UPF2	100	81.260	ENSORLG00015005713	UPF2	100	81.995	Oryzias_latipes_hsok
ENSCATG00000032679	UPF2	99	77.708	ENSOMEG00000023420	UPF2	98	79.062	Oryzias_melastigma
ENSCATG00000032679	UPF2	100	98.585	ENSOGAG00000005796	UPF2	100	98.585	Otolemur_garnettii
ENSCATG00000032679	UPF2	100	97.724	ENSOARG00000014587	UPF2	100	97.724	Ovis_aries
ENSCATG00000032679	UPF2	100	98.970	ENSPPAG00000037953	UPF2	100	98.970	Pan_paniscus
ENSCATG00000032679	UPF2	100	97.720	ENSPPRG00000000690	UPF2	100	97.720	Panthera_pardus
ENSCATG00000032679	UPF2	100	97.720	ENSPTIG00000008867	UPF2	100	97.720	Panthera_tigris_altaica
ENSCATG00000032679	UPF2	100	99.686	ENSPTRG00000002291	UPF2	100	99.686	Pan_troglodytes
ENSCATG00000032679	UPF2	100	99.921	ENSPANG00000023399	UPF2	100	99.921	Papio_anubis
ENSCATG00000032679	UPF2	100	80.811	ENSPKIG00000025502	UPF2	100	82.073	Paramormyrops_kingsleyae
ENSCATG00000032679	UPF2	60	91.512	ENSPSIG00000015158	UPF2	95	91.512	Pelodiscus_sinensis
ENSCATG00000032679	UPF2	99	79.749	ENSPMGG00000005259	UPF2	100	80.534	Periophthalmus_magnuspinnatus
ENSCATG00000032679	UPF2	93	94.186	ENSPEMG00000015731	Upf2	99	94.186	Peromyscus_maniculatus_bairdii
ENSCATG00000032679	UPF2	100	93.239	ENSPCIG00000006656	UPF2	100	95.283	Phascolarctos_cinereus
ENSCATG00000032679	UPF2	100	79.891	ENSPFOG00000017118	UPF2	100	81.917	Poecilia_formosa
ENSCATG00000032679	UPF2	100	79.891	ENSPLAG00000005094	UPF2	100	81.917	Poecilia_latipinna
ENSCATG00000032679	UPF2	100	79.891	ENSPMEG00000017009	UPF2	100	81.917	Poecilia_mexicana
ENSCATG00000032679	UPF2	99	79.656	ENSPREG00000021880	UPF2	100	82.081	Poecilia_reticulata
ENSCATG00000032679	UPF2	66	99.880	ENSPPYG00000002089	-	100	99.880	Pongo_abelii
ENSCATG00000032679	UPF2	100	83.412	ENSPCAG00000000684	UPF2	100	83.412	Procavia_capensis
ENSCATG00000032679	UPF2	100	96.434	ENSPCOG00000021656	UPF2	100	96.434	Propithecus_coquereli
ENSCATG00000032679	UPF2	100	90.181	ENSPVAG00000017286	UPF2	100	90.181	Pteropus_vampyrus
ENSCATG00000032679	UPF2	99	78.610	ENSPNYG00000017096	UPF2	100	80.328	Pundamilia_nyererei
ENSCATG00000032679	UPF2	100	82.697	ENSPNAG00000009357	UPF2	100	83.164	Pygocentrus_nattereri
ENSCATG00000032679	UPF2	99	90.824	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSCATG00000032679	UPF2	100	98.811	ENSRBIG00000037780	UPF2	100	98.819	Rhinopithecus_bieti
ENSCATG00000032679	UPF2	100	99.843	ENSRROG00000043547	UPF2	100	99.843	Rhinopithecus_roxellana
ENSCATG00000032679	UPF2	100	98.978	ENSSBOG00000020012	UPF2	100	98.978	Saimiri_boliviensis_boliviensis
ENSCATG00000032679	UPF2	100	81.698	ENSSFOG00015023788	upf2	100	82.788	Scleropages_formosus
ENSCATG00000032679	UPF2	90	83.001	ENSSMAG00000007637	UPF2	100	80.155	Scophthalmus_maximus
ENSCATG00000032679	UPF2	100	82.307	ENSSDUG00000017244	UPF2	99	82.775	Seriola_dumerili
ENSCATG00000032679	UPF2	99	80.595	ENSSLDG00000016866	UPF2	100	81.142	Seriola_lalandi_dorsalis
ENSCATG00000032679	UPF2	100	95.519	ENSSARG00000008615	UPF2	100	95.519	Sorex_araneus
ENSCATG00000032679	UPF2	99	90.087	ENSSPUG00000014544	UPF2	99	90.087	Sphenodon_punctatus
ENSCATG00000032679	UPF2	68	99.079	ENSSSCG00000011117	-	100	99.079	Sus_scrofa
ENSCATG00000032679	UPF2	99	91.332	ENSTGUG00000002163	-	100	93.144	Taeniopygia_guttata
ENSCATG00000032679	UPF2	100	81.790	ENSTRUG00000007519	UPF2	99	82.151	Takifugu_rubripes
ENSCATG00000032679	UPF2	100	80.109	ENSTNIG00000004453	UPF2	100	80.000	Tetraodon_nigroviridis
ENSCATG00000032679	UPF2	93	90.525	ENSTBEG00000012679	UPF2	93	90.863	Tupaia_belangeri
ENSCATG00000032679	UPF2	100	97.799	ENSTTRG00000016388	UPF2	100	97.799	Tursiops_truncatus
ENSCATG00000032679	UPF2	94	100.000	ENSUAMG00000023560	UPF2	99	100.000	Ursus_americanus
ENSCATG00000032679	UPF2	100	98.113	ENSUMAG00000012953	UPF2	95	98.113	Ursus_maritimus
ENSCATG00000032679	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSCATG00000032679	UPF2	100	97.799	ENSVVUG00000006166	UPF2	100	97.799	Vulpes_vulpes
ENSCATG00000032679	UPF2	100	83.450	ENSXETG00000033103	UPF2	91	89.014	Xenopus_tropicalis
ENSCATG00000032679	UPF2	92	84.458	ENSXCOG00000011604	UPF2	100	81.577	Xiphophorus_couchianus
ENSCATG00000032679	UPF2	92	84.740	ENSXMAG00000017209	UPF2	100	81.606	Xiphophorus_maculatus