EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000033135 (Gene tree)
Gene ID: 105577660
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 107461 bases
Position: chrKQ012442.1:1813019-1920479
Accession: 105577660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000018645	Ago_hook	PF10427.9	2.7e-21	1	1
ENSCATP00000018622	Ago_hook	PF10427.9	4.1e-21	1	1
ENSCATP00000018634	Ago_hook	PF10427.9	4.1e-21	1	1
ENSCATP00000018632	Ago_hook	PF10427.9	6.4e-21	1	1
ENSCATP00000018632	RRM_1	PF00076.22	0.00035	1	1
ENSCATP00000018622	RRM_1	PF00076.22	0.00036	1	1
ENSCATP00000018634	RRM_1	PF00076.22	0.00036	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000042800	TNRC6C-201	9705	XM_012042309	ENSCATP00000018622	1725 (aa)	XP_011897699	A0A2K5M089
ENSCATT00000042823	TNRC6C-204	5832	XM_012042300	ENSCATP00000018645	1943 (aa)	XP_011897690	A0A2K5M0C2
ENSCATT00000042812	TNRC6C-203	9730	XM_012042297	ENSCATP00000018634	1725 (aa)	XP_011897687	A0A2K5M089
ENSCATT00000042810	TNRC6C-202	9624	XM_012042302	ENSCATP00000018632	1689 (aa)	XP_011897692	A0A2K5M0A1

Gene Model

Click here to download ENSCATG00000033135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000033135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000033135	TNRC6C	98	43.656	ENSCATG00000019284	TNRC6A	98	49.852
ENSCATG00000033135	TNRC6C	98	36.947	ENSCATG00000029291	TNRC6B	91	53.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000033135	TNRC6C	100	98.957	ENSG00000078687	TNRC6C	100	98.957	Homo_sapiens
ENSCATG00000033135	TNRC6C	80	54.617	ENSAPOG00000019749	tnrc6c1	98	49.157	Acanthochromis_polyacanthus
ENSCATG00000033135	TNRC6C	100	89.667	ENSAMEG00000013756	TNRC6C	99	89.120	Ailuropoda_melanoleuca
ENSCATG00000033135	TNRC6C	94	50.359	ENSACIG00000008075	tnrc6c1	98	54.440	Amphilophus_citrinellus
ENSCATG00000033135	TNRC6C	77	68.960	ENSAOCG00000023968	tnrc6c1	99	49.104	Amphiprion_ocellaris
ENSCATG00000033135	TNRC6C	80	54.334	ENSAPEG00000009020	tnrc6c1	99	49.002	Amphiprion_percula
ENSCATG00000033135	TNRC6C	100	86.991	ENSAPLG00000005456	TNRC6C	100	86.371	Anas_platyrhynchos
ENSCATG00000033135	TNRC6C	100	87.674	ENSACAG00000016198	TNRC6C	98	86.719	Anolis_carolinensis
ENSCATG00000033135	TNRC6C	100	98.046	ENSANAG00000021554	TNRC6C	100	98.046	Aotus_nancymaae
ENSCATG00000033135	TNRC6C	100	49.390	ENSACLG00000000424	tnrc6c1	99	48.660	Astatotilapia_calliptera
ENSCATG00000033135	TNRC6C	97	90.961	ENSBTAG00000018658	TNRC6C	100	88.187	Bos_taurus
ENSCATG00000033135	TNRC6C	100	97.987	ENSCJAG00000019431	TNRC6C	100	97.987	Callithrix_jacchus
ENSCATG00000033135	TNRC6C	100	91.488	ENSCAFG00000005224	TNRC6C	99	90.999	Canis_familiaris
ENSCATG00000033135	TNRC6C	100	91.124	ENSCAFG00020006661	TNRC6C	100	90.420	Canis_lupus_dingo
ENSCATG00000033135	TNRC6C	100	87.574	ENSCHIG00000026004	TNRC6C	100	86.118	Capra_hircus
ENSCATG00000033135	TNRC6C	100	95.942	ENSTSYG00000005403	TNRC6C	100	95.942	Carlito_syrichta
ENSCATG00000033135	TNRC6C	100	84.824	ENSCAPG00000007307	TNRC6C	99	83.866	Cavia_aperea
ENSCATG00000033135	TNRC6C	100	90.112	ENSCPOG00000000467	TNRC6C	100	88.166	Cavia_porcellus
ENSCATG00000033135	TNRC6C	100	98.261	ENSCCAG00000030524	TNRC6C	100	98.261	Cebus_capucinus
ENSCATG00000033135	TNRC6C	100	93.250	ENSCLAG00000011139	TNRC6C	99	90.469	Chinchilla_lanigera
ENSCATG00000033135	TNRC6C	100	99.710	ENSCSAG00000005167	TNRC6C	100	99.228	Chlorocebus_sabaeus
ENSCATG00000033135	TNRC6C	75	91.892	ENSCHOG00000000088	TNRC6C	72	91.011	Choloepus_hoffmanni
ENSCATG00000033135	TNRC6C	100	88.009	ENSCPBG00000027960	TNRC6C	100	88.009	Chrysemys_picta_bellii
ENSCATG00000033135	TNRC6C	100	99.125	ENSCANG00000041771	TNRC6C	100	99.125	Colobus_angolensis_palliatus
ENSCATG00000033135	TNRC6C	100	89.806	ENSCGRG00001022686	Tnrc6c	100	88.627	Cricetulus_griseus_chok1gshd
ENSCATG00000033135	TNRC6C	100	90.231	ENSCGRG00000018041	Tnrc6c	100	88.627	Cricetulus_griseus_crigri
ENSCATG00000033135	TNRC6C	80	53.408	ENSCSEG00000012744	tnrc6c1	98	45.914	Cynoglossus_semilaevis
ENSCATG00000033135	TNRC6C	100	54.252	ENSDARG00000076847	tnrc6c1	99	54.313	Danio_rerio
ENSCATG00000033135	TNRC6C	100	91.151	ENSDNOG00000003247	TNRC6C	99	88.981	Dasypus_novemcinctus
ENSCATG00000033135	TNRC6C	100	86.051	ENSDORG00000004558	Tnrc6c	100	85.933	Dipodomys_ordii
ENSCATG00000033135	TNRC6C	90	82.957	ENSETEG00000005527	TNRC6C	86	83.539	Echinops_telfairi
ENSCATG00000033135	TNRC6C	100	91.065	ENSEASG00005004799	TNRC6C	100	91.124	Equus_asinus_asinus
ENSCATG00000033135	TNRC6C	100	91.194	ENSECAG00000012486	TNRC6C	99	90.397	Equus_caballus
ENSCATG00000033135	TNRC6C	96	91.682	ENSEEUG00000010008	TNRC6C	96	92.217	Erinaceus_europaeus
ENSCATG00000033135	TNRC6C	100	89.309	ENSFCAG00000028358	TNRC6C	100	89.250	Felis_catus
ENSCATG00000033135	TNRC6C	100	87.011	ENSFALG00000000848	TNRC6C	100	86.330	Ficedula_albicollis
ENSCATG00000033135	TNRC6C	100	91.297	ENSFDAG00000010368	TNRC6C	100	89.624	Fukomys_damarensis
ENSCATG00000033135	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	45.943	Fundulus_heteroclitus
ENSCATG00000033135	TNRC6C	100	88.934	ENSGALG00000001725	TNRC6C	100	88.462	Gallus_gallus
ENSCATG00000033135	TNRC6C	100	48.868	ENSGAFG00000019019	tnrc6c1	100	49.172	Gambusia_affinis
ENSCATG00000033135	TNRC6C	95	52.632	ENSGACG00000012320	tnrc6c1	97	47.916	Gasterosteus_aculeatus
ENSCATG00000033135	TNRC6C	100	87.630	ENSGAGG00000022043	TNRC6C	99	87.431	Gopherus_agassizii
ENSCATG00000033135	TNRC6C	100	98.204	ENSGGOG00000011304	TNRC6C	100	98.204	Gorilla_gorilla
ENSCATG00000033135	TNRC6C	100	49.525	ENSHBUG00000010846	tnrc6c1	99	48.784	Haplochromis_burtoni
ENSCATG00000033135	TNRC6C	100	92.718	ENSHGLG00000004809	TNRC6C	99	89.849	Heterocephalus_glaber_female
ENSCATG00000033135	TNRC6C	100	91.691	ENSHGLG00100012597	TNRC6C	99	90.005	Heterocephalus_glaber_male
ENSCATG00000033135	TNRC6C	99	50.910	ENSIPUG00000000818	tnrc6c1	98	51.605	Ictalurus_punctatus
ENSCATG00000033135	TNRC6C	100	91.130	ENSSTOG00000009101	TNRC6C	100	88.796	Ictidomys_tridecemlineatus
ENSCATG00000033135	TNRC6C	100	88.863	ENSJJAG00000017055	Tnrc6c	99	86.993	Jaculus_jaculus
ENSCATG00000033135	TNRC6C	99	48.089	ENSKMAG00000021023	tnrc6c1	100	50.690	Kryptolebias_marmoratus
ENSCATG00000033135	TNRC6C	100	75.601	ENSLACG00000015283	TNRC6C	100	74.138	Latimeria_chalumnae
ENSCATG00000033135	TNRC6C	99	56.585	ENSLOCG00000013377	tnrc6c1	99	55.507	Lepisosteus_oculatus
ENSCATG00000033135	TNRC6C	100	90.689	ENSLAFG00000011122	TNRC6C	99	88.854	Loxodonta_africana
ENSCATG00000033135	TNRC6C	100	99.884	ENSMFAG00000043943	TNRC6C	100	99.884	Macaca_fascicularis
ENSCATG00000033135	TNRC6C	100	99.884	ENSMMUG00000011924	TNRC6C	100	99.882	Macaca_mulatta
ENSCATG00000033135	TNRC6C	100	99.822	ENSMNEG00000030405	TNRC6C	100	99.822	Macaca_nemestrina
ENSCATG00000033135	TNRC6C	100	99.942	ENSMLEG00000033436	TNRC6C	100	99.942	Mandrillus_leucophaeus
ENSCATG00000033135	TNRC6C	94	55.108	ENSMAMG00000023613	tnrc6c1	100	51.314	Mastacembelus_armatus
ENSCATG00000033135	TNRC6C	100	49.390	ENSMZEG00005010920	tnrc6c1	99	48.660	Maylandia_zebra
ENSCATG00000033135	TNRC6C	100	80.126	ENSMGAG00000003906	TNRC6C	100	80.558	Meleagris_gallopavo
ENSCATG00000033135	TNRC6C	100	89.570	ENSMAUG00000021618	Tnrc6c	100	89.511	Mesocricetus_auratus
ENSCATG00000033135	TNRC6C	100	94.319	ENSMICG00000003952	TNRC6C	100	94.203	Microcebus_murinus
ENSCATG00000033135	TNRC6C	100	91.770	ENSMOCG00000015879	Tnrc6c	100	89.288	Microtus_ochrogaster
ENSCATG00000033135	TNRC6C	79	55.899	ENSMMOG00000005203	tnrc6c1	100	50.480	Mola_mola
ENSCATG00000033135	TNRC6C	100	87.118	ENSMODG00000001785	TNRC6C	99	85.231	Monodelphis_domestica
ENSCATG00000033135	TNRC6C	100	91.237	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.783	Mus_caroli
ENSCATG00000033135	TNRC6C	100	91.001	ENSMUSG00000025571	Tnrc6c	100	88.559	Mus_musculus
ENSCATG00000033135	TNRC6C	100	90.941	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.503	Mus_pahari
ENSCATG00000033135	TNRC6C	100	91.060	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.615	Mus_spretus
ENSCATG00000033135	TNRC6C	100	89.056	ENSMPUG00000013348	TNRC6C	98	88.606	Mustela_putorius_furo
ENSCATG00000033135	TNRC6C	100	82.434	ENSMLUG00000014431	TNRC6C	98	82.047	Myotis_lucifugus
ENSCATG00000033135	TNRC6C	100	90.689	ENSNGAG00000012203	Tnrc6c	99	89.062	Nannospalax_galili
ENSCATG00000033135	TNRC6C	100	50.028	ENSNBRG00000005344	tnrc6c1	99	49.232	Neolamprologus_brichardi
ENSCATG00000033135	TNRC6C	100	95.730	ENSNLEG00000000047	TNRC6C	99	95.356	Nomascus_leucogenys
ENSCATG00000033135	TNRC6C	97	81.818	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSCATG00000033135	TNRC6C	100	92.007	ENSODEG00000012499	TNRC6C	100	92.185	Octodon_degus
ENSCATG00000033135	TNRC6C	94	51.399	ENSONIG00000002210	tnrc6c1	96	52.257	Oreochromis_niloticus
ENSCATG00000033135	TNRC6C	99	63.546	ENSOANG00000009758	-	100	61.154	Ornithorhynchus_anatinus
ENSCATG00000033135	TNRC6C	81	88.421	ENSOCUG00000006122	TNRC6C	95	79.452	Oryctolagus_cuniculus
ENSCATG00000033135	TNRC6C	91	50.306	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSCATG00000033135	TNRC6C	92	50.180	ENSORLG00020016510	tnrc6c1	100	49.335	Oryzias_latipes_hni
ENSCATG00000033135	TNRC6C	72	45.305	ENSORLG00015000171	tnrc6c1	98	44.921	Oryzias_latipes_hsok
ENSCATG00000033135	TNRC6C	92	51.050	ENSOMEG00000000357	tnrc6c1	99	48.173	Oryzias_melastigma
ENSCATG00000033135	TNRC6C	100	93.159	ENSOGAG00000007197	TNRC6C	100	93.159	Otolemur_garnettii
ENSCATG00000033135	TNRC6C	96	84.806	ENSOARG00000006041	TNRC6C	97	84.943	Ovis_aries
ENSCATG00000033135	TNRC6C	100	98.899	ENSPPAG00000027160	TNRC6C	100	98.899	Pan_paniscus
ENSCATG00000033135	TNRC6C	100	89.309	ENSPPRG00000018881	TNRC6C	100	89.250	Panthera_pardus
ENSCATG00000033135	TNRC6C	90	85.590	ENSPTIG00000008791	TNRC6C	81	96.429	Panthera_tigris_altaica
ENSCATG00000033135	TNRC6C	100	98.899	ENSPTRG00000009699	TNRC6C	100	98.899	Pan_troglodytes
ENSCATG00000033135	TNRC6C	100	99.794	ENSPANG00000019994	TNRC6C	100	99.794	Papio_anubis
ENSCATG00000033135	TNRC6C	96	53.012	ENSPKIG00000005428	tnrc6c1	100	51.688	Paramormyrops_kingsleyae
ENSCATG00000033135	TNRC6C	100	86.399	ENSPSIG00000018069	TNRC6C	100	84.004	Pelodiscus_sinensis
ENSCATG00000033135	TNRC6C	79	54.194	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSCATG00000033135	TNRC6C	100	90.866	ENSPEMG00000009785	Tnrc6c	100	88.450	Peromyscus_maniculatus_bairdii
ENSCATG00000033135	TNRC6C	58	86.051	ENSPCIG00000017421	-	99	85.905	Phascolarctos_cinereus
ENSCATG00000033135	TNRC6C	100	48.681	ENSPFOG00000012560	tnrc6c1	97	57.427	Poecilia_formosa
ENSCATG00000033135	TNRC6C	100	50.000	ENSPLAG00000021055	tnrc6c1	100	49.916	Poecilia_latipinna
ENSCATG00000033135	TNRC6C	100	99.188	ENSPPYG00000008679	TNRC6C	99	98.662	Pongo_abelii
ENSCATG00000033135	TNRC6C	93	92.654	ENSPCAG00000012510	TNRC6C	91	92.654	Procavia_capensis
ENSCATG00000033135	TNRC6C	100	94.783	ENSPCOG00000021451	TNRC6C	100	94.783	Propithecus_coquereli
ENSCATG00000033135	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSCATG00000033135	TNRC6C	100	49.194	ENSPNYG00000014477	tnrc6c1	99	48.421	Pundamilia_nyererei
ENSCATG00000033135	TNRC6C	100	90.361	ENSRNOG00000022395	Tnrc6c	100	90.361	Rattus_norvegicus
ENSCATG00000033135	TNRC6C	100	99.362	ENSRBIG00000027777	TNRC6C	100	99.362	Rhinopithecus_bieti
ENSCATG00000033135	TNRC6C	100	99.434	ENSRROG00000042912	TNRC6C	100	99.434	Rhinopithecus_roxellana
ENSCATG00000033135	TNRC6C	100	97.855	ENSSBOG00000023981	TNRC6C	100	97.855	Saimiri_boliviensis_boliviensis
ENSCATG00000033135	TNRC6C	54	90.378	ENSSHAG00000018330	-	100	89.730	Sarcophilus_harrisii
ENSCATG00000033135	TNRC6C	75	56.394	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSCATG00000033135	TNRC6C	93	57.641	ENSSFOG00015006475	tnrc6c1	99	51.702	Scleropages_formosus
ENSCATG00000033135	TNRC6C	100	48.947	ENSSMAG00000012761	tnrc6c1	99	50.546	Scophthalmus_maximus
ENSCATG00000033135	TNRC6C	100	50.828	ENSSDUG00000002366	tnrc6c1	99	49.552	Seriola_dumerili
ENSCATG00000033135	TNRC6C	100	49.057	ENSSLDG00000025613	tnrc6c1	100	50.139	Seriola_lalandi_dorsalis
ENSCATG00000033135	TNRC6C	91	89.655	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSCATG00000033135	TNRC6C	83	86.944	ENSSPUG00000007341	TNRC6C	98	87.014	Sphenodon_punctatus
ENSCATG00000033135	TNRC6C	79	54.089	ENSSPAG00000014977	tnrc6c1	97	49.196	Stegastes_partitus
ENSCATG00000033135	TNRC6C	97	90.722	ENSSSCG00000034373	TNRC6C	100	87.987	Sus_scrofa
ENSCATG00000033135	TNRC6C	100	88.468	ENSTGUG00000007733	TNRC6C	100	86.074	Taeniopygia_guttata
ENSCATG00000033135	TNRC6C	79	54.986	ENSTRUG00000011685	tnrc6c1	100	49.834	Takifugu_rubripes
ENSCATG00000033135	TNRC6C	88	52.867	ENSTNIG00000005273	tnrc6c1	100	60.980	Tetraodon_nigroviridis
ENSCATG00000033135	TNRC6C	67	82.058	ENSTBEG00000005046	TNRC6C	100	82.410	Tupaia_belangeri
ENSCATG00000033135	TNRC6C	100	90.893	ENSTTRG00000010828	TNRC6C	97	90.952	Tursiops_truncatus
ENSCATG00000033135	TNRC6C	100	89.292	ENSUMAG00000013614	TNRC6C	99	89.600	Ursus_maritimus
ENSCATG00000033135	TNRC6C	52	80.979	ENSVPAG00000006765	-	99	80.985	Vicugna_pacos
ENSCATG00000033135	TNRC6C	100	91.780	ENSVVUG00000015268	TNRC6C	100	91.780	Vulpes_vulpes
ENSCATG00000033135	TNRC6C	100	75.206	ENSXETG00000019470	tnrc6c	100	74.559	Xenopus_tropicalis
ENSCATG00000033135	TNRC6C	100	49.828	ENSXMAG00000025971	tnrc6c1	100	49.089	Xiphophorus_maculatus