EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000033431 (Gene tree)
Gene ID: 105577930
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 39125 bases
Position: chrKQ012453.1:6921855-6960979
Accession: 105577930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000019287	TruB_N	PF01509.18	6.2e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000043468	TRUB1-201	3414	XM_012043015	ENSCATP00000019287	350 (aa)	XP_011898405	A0A2K5M259

Gene Model

Click here to download ENSCATG00000033431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000033431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000033431	TRUB1	64	33.480	ENSCATG00000038234	TRUB2	62	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000033431	TRUB1	100	97.429	ENSG00000165832	TRUB1	100	97.429	Homo_sapiens
ENSCATG00000033431	TRUB1	70	68.571	ENSAPOG00000020565	trub1	89	68.293	Acanthochromis_polyacanthus
ENSCATG00000033431	TRUB1	96	93.195	ENSAMEG00000014931	TRUB1	99	92.877	Ailuropoda_melanoleuca
ENSCATG00000033431	TRUB1	81	57.394	ENSACIG00000003060	trub1	94	57.394	Amphilophus_citrinellus
ENSCATG00000033431	TRUB1	70	68.571	ENSAOCG00000017188	trub1	89	68.293	Amphiprion_ocellaris
ENSCATG00000033431	TRUB1	70	67.886	ENSAPEG00000015209	trub1	89	67.886	Amphiprion_percula
ENSCATG00000033431	TRUB1	69	68.880	ENSATEG00000023291	trub1	86	68.880	Anabas_testudineus
ENSCATG00000033431	TRUB1	79	75.273	ENSAPLG00000006808	TRUB1	99	75.273	Anas_platyrhynchos
ENSCATG00000033431	TRUB1	76	71.429	ENSACAG00000009282	TRUB1	96	71.429	Anolis_carolinensis
ENSCATG00000033431	TRUB1	100	97.151	ENSANAG00000022870	TRUB1	100	97.151	Aotus_nancymaae
ENSCATG00000033431	TRUB1	72	67.063	ENSACLG00000000823	trub1	91	67.063	Astatotilapia_calliptera
ENSCATG00000033431	TRUB1	79	64.727	ENSAMXG00000015845	trub1	92	64.727	Astyanax_mexicanus
ENSCATG00000033431	TRUB1	98	92.105	ENSBTAG00000012955	TRUB1	99	91.453	Bos_taurus
ENSCATG00000033431	TRUB1	100	97.151	ENSCJAG00000047815	TRUB1	100	97.151	Callithrix_jacchus
ENSCATG00000033431	TRUB1	99	93.410	ENSCAFG00000011688	TRUB1	99	93.410	Canis_familiaris
ENSCATG00000033431	TRUB1	99	93.696	ENSCAFG00020013237	TRUB1	99	93.696	Canis_lupus_dingo
ENSCATG00000033431	TRUB1	98	92.690	ENSCHIG00000020884	TRUB1	99	92.286	Capra_hircus
ENSCATG00000033431	TRUB1	100	90.883	ENSTSYG00000000446	TRUB1	100	92.023	Carlito_syrichta
ENSCATG00000033431	TRUB1	73	84.646	ENSCAPG00000017088	TRUB1	100	84.646	Cavia_aperea
ENSCATG00000033431	TRUB1	70	85.714	ENSCPOG00000040236	-	100	85.714	Cavia_porcellus
ENSCATG00000033431	TRUB1	71	79.435	ENSCPOG00000030129	-	86	79.032	Cavia_porcellus
ENSCATG00000033431	TRUB1	96	97.329	ENSCCAG00000028842	TRUB1	100	96.296	Cebus_capucinus
ENSCATG00000033431	TRUB1	70	89.388	ENSCLAG00000008664	TRUB1	100	89.388	Chinchilla_lanigera
ENSCATG00000033431	TRUB1	100	99.429	ENSCSAG00000004891	TRUB1	100	99.429	Chlorocebus_sabaeus
ENSCATG00000033431	TRUB1	99	78.324	ENSCHOG00000011931	TRUB1	99	78.324	Choloepus_hoffmanni
ENSCATG00000033431	TRUB1	78	79.044	ENSCPBG00000003051	TRUB1	94	79.044	Chrysemys_picta_bellii
ENSCATG00000033431	TRUB1	100	99.714	ENSCANG00000029445	TRUB1	100	99.714	Colobus_angolensis_palliatus
ENSCATG00000033431	TRUB1	73	87.795	ENSCGRG00001016772	-	90	79.461	Cricetulus_griseus_chok1gshd
ENSCATG00000033431	TRUB1	80	80.000	ENSCGRG00001010322	-	79	79.932	Cricetulus_griseus_chok1gshd
ENSCATG00000033431	TRUB1	80	88.929	ENSCGRG00000010806	Trub1	91	88.215	Cricetulus_griseus_crigri
ENSCATG00000033431	TRUB1	73	62.500	ENSCSEG00000011261	trub1	97	56.811	Cynoglossus_semilaevis
ENSCATG00000033431	TRUB1	74	65.891	ENSCVAG00000008791	trub1	79	65.891	Cyprinodon_variegatus
ENSCATG00000033431	TRUB1	74	67.181	ENSDARG00000053805	trub1	89	67.181	Danio_rerio
ENSCATG00000033431	TRUB1	97	87.059	ENSDNOG00000001069	TRUB1	99	86.286	Dasypus_novemcinctus
ENSCATG00000033431	TRUB1	99	89.398	ENSDORG00000010431	Trub1	99	88.252	Dipodomys_ordii
ENSCATG00000033431	TRUB1	81	77.941	ENSETEG00000009183	TRUB1	81	76.961	Echinops_telfairi
ENSCATG00000033431	TRUB1	96	93.452	ENSEASG00005014739	TRUB1	99	93.123	Equus_asinus_asinus
ENSCATG00000033431	TRUB1	96	93.452	ENSECAG00000007177	TRUB1	99	93.123	Equus_caballus
ENSCATG00000033431	TRUB1	99	75.978	ENSEEUG00000013993	TRUB1	99	76.816	Erinaceus_europaeus
ENSCATG00000033431	TRUB1	70	69.796	ENSELUG00000000502	trub1	86	69.796	Esox_lucius
ENSCATG00000033431	TRUB1	86	95.667	ENSFCAG00000031927	TRUB1	99	92.241	Felis_catus
ENSCATG00000033431	TRUB1	69	75.833	ENSFALG00000002232	TRUB1	92	75.833	Ficedula_albicollis
ENSCATG00000033431	TRUB1	70	87.347	ENSFDAG00000008140	TRUB1	100	87.347	Fukomys_damarensis
ENSCATG00000033431	TRUB1	70	66.531	ENSFHEG00000004016	trub1	84	66.531	Fundulus_heteroclitus
ENSCATG00000033431	TRUB1	78	74.632	ENSGALG00000009091	TRUB1	96	74.632	Gallus_gallus
ENSCATG00000033431	TRUB1	69	64.344	ENSGAFG00000009193	trub1	86	64.344	Gambusia_affinis
ENSCATG00000033431	TRUB1	56	68.205	ENSGACG00000015387	trub1	96	68.205	Gasterosteus_aculeatus
ENSCATG00000033431	TRUB1	92	71.963	ENSGAGG00000009758	TRUB1	81	77.739	Gopherus_agassizii
ENSCATG00000033431	TRUB1	100	98.000	ENSGGOG00000004583	TRUB1	100	98.000	Gorilla_gorilla
ENSCATG00000033431	TRUB1	72	67.063	ENSHBUG00000016787	trub1	91	67.063	Haplochromis_burtoni
ENSCATG00000033431	TRUB1	99	87.106	ENSHGLG00000015314	TRUB1	99	87.106	Heterocephalus_glaber_female
ENSCATG00000033431	TRUB1	70	86.122	ENSHGLG00100009183	TRUB1	100	86.122	Heterocephalus_glaber_male
ENSCATG00000033431	TRUB1	70	68.163	ENSHCOG00000017877	trub1	89	68.163	Hippocampus_comes
ENSCATG00000033431	TRUB1	78	66.058	ENSIPUG00000017559	trub1	95	66.058	Ictalurus_punctatus
ENSCATG00000033431	TRUB1	90	92.994	ENSSTOG00000003641	TRUB1	99	87.679	Ictidomys_tridecemlineatus
ENSCATG00000033431	TRUB1	99	84.527	ENSJJAG00000011800	Trub1	99	84.241	Jaculus_jaculus
ENSCATG00000033431	TRUB1	72	65.759	ENSKMAG00000006232	trub1	92	65.759	Kryptolebias_marmoratus
ENSCATG00000033431	TRUB1	70	68.293	ENSLBEG00000026722	trub1	86	68.293	Labrus_bergylta
ENSCATG00000033431	TRUB1	79	72.826	ENSLACG00000014885	TRUB1	90	74.444	Latimeria_chalumnae
ENSCATG00000033431	TRUB1	79	69.675	ENSLOCG00000012979	trub1	94	69.675	Lepisosteus_oculatus
ENSCATG00000033431	TRUB1	100	79.609	ENSLAFG00000015452	TRUB1	100	80.447	Loxodonta_africana
ENSCATG00000033431	TRUB1	100	99.143	ENSMFAG00000031767	TRUB1	100	99.143	Macaca_fascicularis
ENSCATG00000033431	TRUB1	100	99.429	ENSMMUG00000001902	TRUB1	100	99.429	Macaca_mulatta
ENSCATG00000033431	TRUB1	100	94.857	ENSMNEG00000044646	TRUB1	100	94.857	Macaca_nemestrina
ENSCATG00000033431	TRUB1	100	99.429	ENSMLEG00000042655	TRUB1	100	99.429	Mandrillus_leucophaeus
ENSCATG00000033431	TRUB1	72	67.063	ENSMZEG00005024095	trub1	91	67.063	Maylandia_zebra
ENSCATG00000033431	TRUB1	75	75.954	ENSMGAG00000011135	TRUB1	90	75.954	Meleagris_gallopavo
ENSCATG00000033431	TRUB1	85	85.570	ENSMAUG00000011101	Trub1	88	85.619	Mesocricetus_auratus
ENSCATG00000033431	TRUB1	99	94.556	ENSMICG00000016324	TRUB1	99	94.556	Microcebus_murinus
ENSCATG00000033431	TRUB1	91	83.077	ENSMOCG00000017759	Trub1	90	87.584	Microtus_ochrogaster
ENSCATG00000033431	TRUB1	82	83.217	ENSMODG00000009676	TRUB1	81	81.419	Monodelphis_domestica
ENSCATG00000033431	TRUB1	99	81.089	MGP_CAROLIEiJ_G0023100	Trub1	99	79.943	Mus_caroli
ENSCATG00000033431	TRUB1	99	79.943	ENSMUSG00000025086	Trub1	99	78.797	Mus_musculus
ENSCATG00000033431	TRUB1	99	81.375	MGP_PahariEiJ_G0014588	Trub1	99	80.229	Mus_pahari
ENSCATG00000033431	TRUB1	99	80.229	MGP_SPRETEiJ_G0024021	Trub1	99	79.083	Mus_spretus
ENSCATG00000033431	TRUB1	86	97.674	ENSMPUG00000003556	TRUB1	99	94.842	Mustela_putorius_furo
ENSCATG00000033431	TRUB1	96	88.358	ENSMLUG00000017686	TRUB1	100	86.325	Myotis_lucifugus
ENSCATG00000033431	TRUB1	99	85.673	ENSNGAG00000018682	Trub1	99	85.673	Nannospalax_galili
ENSCATG00000033431	TRUB1	70	68.293	ENSNBRG00000023393	trub1	88	68.293	Neolamprologus_brichardi
ENSCATG00000033431	TRUB1	100	98.000	ENSNLEG00000016345	TRUB1	100	98.000	Nomascus_leucogenys
ENSCATG00000033431	TRUB1	57	91.045	ENSMEUG00000006603	TRUB1	78	88.152	Notamacropus_eugenii
ENSCATG00000033431	TRUB1	86	86.379	ENSOPRG00000009371	TRUB1	87	86.288	Ochotona_princeps
ENSCATG00000033431	TRUB1	99	85.387	ENSODEG00000010854	TRUB1	99	85.387	Octodon_degus
ENSCATG00000033431	TRUB1	70	67.886	ENSONIG00000007249	trub1	89	67.886	Oreochromis_niloticus
ENSCATG00000033431	TRUB1	78	79.927	ENSOANG00000001556	TRUB1	93	77.739	Ornithorhynchus_anatinus
ENSCATG00000033431	TRUB1	86	88.704	ENSOCUG00000009456	TRUB1	99	83.381	Oryctolagus_cuniculus
ENSCATG00000033431	TRUB1	69	69.295	ENSORLG00000029719	trub1	86	69.295	Oryzias_latipes
ENSCATG00000033431	TRUB1	69	68.880	ENSORLG00020016767	trub1	85	68.880	Oryzias_latipes_hni
ENSCATG00000033431	TRUB1	69	68.880	ENSORLG00015014728	trub1	86	68.880	Oryzias_latipes_hsok
ENSCATG00000033431	TRUB1	74	66.409	ENSOMEG00000014556	trub1	85	68.595	Oryzias_melastigma
ENSCATG00000033431	TRUB1	99	93.696	ENSOGAG00000015895	TRUB1	99	93.696	Otolemur_garnettii
ENSCATG00000033431	TRUB1	84	94.040	ENSOARG00000015591	TRUB1	99	88.202	Ovis_aries
ENSCATG00000033431	TRUB1	100	98.000	ENSPPAG00000043645	TRUB1	100	98.000	Pan_paniscus
ENSCATG00000033431	TRUB1	96	92.239	ENSPPRG00000007096	TRUB1	99	91.667	Panthera_pardus
ENSCATG00000033431	TRUB1	96	92.537	ENSPTIG00000006378	TRUB1	99	91.954	Panthera_tigris_altaica
ENSCATG00000033431	TRUB1	100	98.000	ENSPTRG00000002964	TRUB1	100	98.000	Pan_troglodytes
ENSCATG00000033431	TRUB1	100	99.429	ENSPANG00000020712	TRUB1	100	99.429	Papio_anubis
ENSCATG00000033431	TRUB1	78	76.838	ENSPSIG00000012877	TRUB1	93	76.838	Pelodiscus_sinensis
ENSCATG00000033431	TRUB1	70	66.122	ENSPMGG00000000075	trub1	88	66.122	Periophthalmus_magnuspinnatus
ENSCATG00000033431	TRUB1	86	85.667	ENSPEMG00000011156	Trub1	99	77.937	Peromyscus_maniculatus_bairdii
ENSCATG00000033431	TRUB1	82	82.517	ENSPCIG00000009729	TRUB1	79	81.507	Phascolarctos_cinereus
ENSCATG00000033431	TRUB1	70	66.122	ENSPFOG00000009950	trub1	90	66.122	Poecilia_formosa
ENSCATG00000033431	TRUB1	70	66.122	ENSPLAG00000013855	trub1	86	66.122	Poecilia_latipinna
ENSCATG00000033431	TRUB1	70	66.122	ENSPMEG00000009064	trub1	88	66.122	Poecilia_mexicana
ENSCATG00000033431	TRUB1	70	66.939	ENSPREG00000003343	trub1	88	66.939	Poecilia_reticulata
ENSCATG00000033431	TRUB1	100	97.714	ENSPPYG00000002676	TRUB1	100	97.714	Pongo_abelii
ENSCATG00000033431	TRUB1	100	75.921	ENSPCAG00000008427	TRUB1	100	76.204	Procavia_capensis
ENSCATG00000033431	TRUB1	99	90.258	ENSPCOG00000024360	TRUB1	99	90.258	Propithecus_coquereli
ENSCATG00000033431	TRUB1	75	93.182	ENSPVAG00000007575	TRUB1	100	93.182	Pteropus_vampyrus
ENSCATG00000033431	TRUB1	72	67.063	ENSPNYG00000018614	trub1	91	67.063	Pundamilia_nyererei
ENSCATG00000033431	TRUB1	76	58.868	ENSPNAG00000006881	trub1	90	57.762	Pygocentrus_nattereri
ENSCATG00000033431	TRUB1	99	81.662	ENSRNOG00000017321	Trub1	99	80.516	Rattus_norvegicus
ENSCATG00000033431	TRUB1	100	89.429	ENSRBIG00000033423	TRUB1	100	89.429	Rhinopithecus_bieti
ENSCATG00000033431	TRUB1	100	99.143	ENSRROG00000033902	TRUB1	100	99.143	Rhinopithecus_roxellana
ENSCATG00000033431	TRUB1	100	96.581	ENSSBOG00000024237	TRUB1	100	96.581	Saimiri_boliviensis_boliviensis
ENSCATG00000033431	TRUB1	73	81.250	ENSSHAG00000009346	TRUB1	86	81.250	Sarcophilus_harrisii
ENSCATG00000033431	TRUB1	69	69.959	ENSSFOG00015022124	trub1	83	69.959	Scleropages_formosus
ENSCATG00000033431	TRUB1	70	68.699	ENSSMAG00000001020	trub1	88	68.699	Scophthalmus_maximus
ENSCATG00000033431	TRUB1	69	69.167	ENSSDUG00000016414	trub1	88	69.106	Seriola_dumerili
ENSCATG00000033431	TRUB1	69	69.583	ENSSLDG00000015486	trub1	88	69.512	Seriola_lalandi_dorsalis
ENSCATG00000033431	TRUB1	85	74.411	ENSSPUG00000001642	TRUB1	96	76.786	Sphenodon_punctatus
ENSCATG00000033431	TRUB1	74	66.923	ENSSPAG00000001217	trub1	92	66.923	Stegastes_partitus
ENSCATG00000033431	TRUB1	99	87.679	ENSSSCG00000010653	TRUB1	99	87.679	Sus_scrofa
ENSCATG00000033431	TRUB1	77	75.556	ENSTGUG00000010971	TRUB1	97	75.368	Taeniopygia_guttata
ENSCATG00000033431	TRUB1	72	77.075	ENSTBEG00000002880	TRUB1	99	77.075	Tupaia_belangeri
ENSCATG00000033431	TRUB1	72	91.633	ENSTTRG00000005767	TRUB1	100	91.288	Tursiops_truncatus
ENSCATG00000033431	TRUB1	96	94.643	ENSUAMG00000024876	TRUB1	99	93.983	Ursus_americanus
ENSCATG00000033431	TRUB1	84	97.288	ENSUMAG00000002411	TRUB1	99	89.971	Ursus_maritimus
ENSCATG00000033431	TRUB1	99	92.837	ENSVPAG00000005507	TRUB1	99	92.837	Vicugna_pacos
ENSCATG00000033431	TRUB1	99	92.264	ENSVVUG00000010085	TRUB1	83	91.977	Vulpes_vulpes
ENSCATG00000033431	TRUB1	78	66.176	ENSXETG00000023828	trub1	98	66.176	Xenopus_tropicalis
ENSCATG00000033431	TRUB1	69	65.021	ENSXCOG00000017847	trub1	86	65.021	Xiphophorus_couchianus
ENSCATG00000033431	TRUB1	70	65.306	ENSXMAG00000014701	trub1	88	65.306	Xiphophorus_maculatus