EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000033497 (Gene tree)
Gene ID: 105597574
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 89792 bases
Position: chrKQ010861.1:2354028-2443819
Accession: 105597574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000019424	zf-CCCH	PF00642.24	0.00033	1	1
ENSCATP00000019429	zf-CCCH	PF00642.24	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000043611	RC3H1-202	3867	XM_012085952	ENSCATP00000019429	1134 (aa)	XP_011941342	A0A2K5M2L5
ENSCATT00000043606	RC3H1-201	11128	XM_012085954	ENSCATP00000019424	1133 (aa)	XP_011941344	A0A2K5M2L0

Gene Model

Click here to download ENSCATG00000033497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000033497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000033497	RC3H1	96	52.654	ENSCATG00000036655	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000033497	RC3H1	100	99.294	ENSG00000135870	RC3H1	100	99.294	Homo_sapiens
ENSCATG00000033497	RC3H1	100	97.087	ENSAMEG00000015657	RC3H1	100	97.087	Ailuropoda_melanoleuca
ENSCATG00000033497	RC3H1	100	88.492	ENSAPLG00000005341	RC3H1	100	88.492	Anas_platyrhynchos
ENSCATG00000033497	RC3H1	100	85.515	ENSACAG00000015271	RC3H1	100	85.515	Anolis_carolinensis
ENSCATG00000033497	RC3H1	100	99.117	ENSANAG00000036716	RC3H1	100	99.117	Aotus_nancymaae
ENSCATG00000033497	RC3H1	100	96.028	ENSBTAG00000052708	RC3H1	100	96.028	Bos_taurus
ENSCATG00000033497	RC3H1	100	98.764	ENSCJAG00000009106	RC3H1	100	98.764	Callithrix_jacchus
ENSCATG00000033497	RC3H1	100	97.176	ENSCAFG00000014434	RC3H1	100	97.176	Canis_familiaris
ENSCATG00000033497	RC3H1	100	97.090	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSCATG00000033497	RC3H1	100	96.381	ENSCHIG00000002873	RC3H1	100	96.381	Capra_hircus
ENSCATG00000033497	RC3H1	99	95.499	ENSTSYG00000003913	RC3H1	99	95.499	Carlito_syrichta
ENSCATG00000033497	RC3H1	100	91.534	ENSCPOG00000004349	RC3H1	100	91.446	Cavia_porcellus
ENSCATG00000033497	RC3H1	100	96.734	ENSCCAG00000025652	RC3H1	98	98.756	Cebus_capucinus
ENSCATG00000033497	RC3H1	100	95.062	ENSCLAG00000011267	RC3H1	100	95.062	Chinchilla_lanigera
ENSCATG00000033497	RC3H1	96	99.723	ENSCSAG00000011823	RC3H1	85	99.540	Chlorocebus_sabaeus
ENSCATG00000033497	RC3H1	100	89.912	ENSCPBG00000014670	RC3H1	100	89.912	Chrysemys_picta_bellii
ENSCATG00000033497	RC3H1	100	99.735	ENSCANG00000032120	RC3H1	100	99.735	Colobus_angolensis_palliatus
ENSCATG00000033497	RC3H1	100	94.351	ENSCGRG00001020812	Rc3h1	100	93.910	Cricetulus_griseus_chok1gshd
ENSCATG00000033497	RC3H1	100	94.351	ENSCGRG00000011952	Rc3h1	100	93.910	Cricetulus_griseus_crigri
ENSCATG00000033497	RC3H1	55	95.820	ENSDNOG00000011494	RC3H1	99	95.820	Dasypus_novemcinctus
ENSCATG00000033497	RC3H1	100	96.028	ENSDORG00000004855	Rc3h1	100	96.028	Dipodomys_ordii
ENSCATG00000033497	RC3H1	81	96.886	ENSETEG00000012064	RC3H1	87	96.886	Echinops_telfairi
ENSCATG00000033497	RC3H1	100	96.117	ENSEASG00005017000	RC3H1	100	96.117	Equus_asinus_asinus
ENSCATG00000033497	RC3H1	100	95.940	ENSECAG00000021208	RC3H1	100	95.940	Equus_caballus
ENSCATG00000033497	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSCATG00000033497	RC3H1	100	97.529	ENSFCAG00000014924	RC3H1	100	97.529	Felis_catus
ENSCATG00000033497	RC3H1	100	87.511	ENSFALG00000002947	RC3H1	100	86.987	Ficedula_albicollis
ENSCATG00000033497	RC3H1	100	95.238	ENSFDAG00000013303	RC3H1	100	95.238	Fukomys_damarensis
ENSCATG00000033497	RC3H1	100	87.467	ENSGALG00000004587	RC3H1	100	87.467	Gallus_gallus
ENSCATG00000033497	RC3H1	100	88.256	ENSGAGG00000018194	RC3H1	100	88.519	Gopherus_agassizii
ENSCATG00000033497	RC3H1	100	92.348	ENSGGOG00000005735	RC3H1	100	92.348	Gorilla_gorilla
ENSCATG00000033497	RC3H1	88	88.904	ENSHGLG00000004183	-	99	88.859	Heterocephalus_glaber_female
ENSCATG00000033497	RC3H1	100	94.621	ENSHGLG00100008577	RC3H1	100	94.621	Heterocephalus_glaber_male
ENSCATG00000033497	RC3H1	100	96.649	ENSSTOG00000016033	RC3H1	100	96.649	Ictidomys_tridecemlineatus
ENSCATG00000033497	RC3H1	100	95.234	ENSJJAG00000018915	Rc3h1	100	95.057	Jaculus_jaculus
ENSCATG00000033497	RC3H1	100	75.565	ENSLACG00000016186	RC3H1	100	78.699	Latimeria_chalumnae
ENSCATG00000033497	RC3H1	97	97.632	ENSLAFG00000004367	RC3H1	100	97.632	Loxodonta_africana
ENSCATG00000033497	RC3H1	100	99.912	ENSMFAG00000033725	RC3H1	100	99.912	Macaca_fascicularis
ENSCATG00000033497	RC3H1	100	99.823	ENSMMUG00000000630	RC3H1	100	99.823	Macaca_mulatta
ENSCATG00000033497	RC3H1	100	100.000	ENSMNEG00000035968	RC3H1	100	100.000	Macaca_nemestrina
ENSCATG00000033497	RC3H1	100	99.912	ENSMLEG00000037455	RC3H1	100	99.912	Mandrillus_leucophaeus
ENSCATG00000033497	RC3H1	97	94.556	ENSMAUG00000020864	Rc3h1	100	94.052	Mesocricetus_auratus
ENSCATG00000033497	RC3H1	100	97.617	ENSMICG00000003000	RC3H1	100	97.617	Microcebus_murinus
ENSCATG00000033497	RC3H1	93	92.992	ENSMOCG00000016587	Rc3h1	98	92.614	Microtus_ochrogaster
ENSCATG00000033497	RC3H1	100	92.416	ENSMODG00000004289	RC3H1	100	92.504	Monodelphis_domestica
ENSCATG00000033497	RC3H1	100	93.910	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.469	Mus_caroli
ENSCATG00000033497	RC3H1	100	93.733	ENSMUSG00000040423	Rc3h1	100	93.292	Mus_musculus
ENSCATG00000033497	RC3H1	100	93.557	MGP_PahariEiJ_G0027992	Rc3h1	100	93.116	Mus_pahari
ENSCATG00000033497	RC3H1	100	93.557	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.116	Mus_spretus
ENSCATG00000033497	RC3H1	100	96.825	ENSMPUG00000004747	RC3H1	100	96.825	Mustela_putorius_furo
ENSCATG00000033497	RC3H1	100	95.675	ENSMLUG00000011127	RC3H1	100	95.675	Myotis_lucifugus
ENSCATG00000033497	RC3H1	100	95.940	ENSNGAG00000011135	Rc3h1	100	95.499	Nannospalax_galili
ENSCATG00000033497	RC3H1	100	99.206	ENSNLEG00000015327	RC3H1	100	99.206	Nomascus_leucogenys
ENSCATG00000033497	RC3H1	99	82.935	ENSOPRG00000013068	RC3H1	99	83.024	Ochotona_princeps
ENSCATG00000033497	RC3H1	100	94.709	ENSODEG00000014185	RC3H1	100	94.709	Octodon_degus
ENSCATG00000033497	RC3H1	100	91.878	ENSOANG00000000924	RC3H1	100	91.790	Ornithorhynchus_anatinus
ENSCATG00000033497	RC3H1	99	96.150	ENSOCUG00000004930	RC3H1	98	96.150	Oryctolagus_cuniculus
ENSCATG00000033497	RC3H1	100	90.396	ENSOGAG00000004044	RC3H1	100	90.396	Otolemur_garnettii
ENSCATG00000033497	RC3H1	100	96.754	ENSOARG00000013011	RC3H1	100	96.754	Ovis_aries
ENSCATG00000033497	RC3H1	100	99.383	ENSPPAG00000039253	RC3H1	100	99.383	Pan_paniscus
ENSCATG00000033497	RC3H1	100	96.823	ENSPPRG00000009007	RC3H1	100	96.823	Panthera_pardus
ENSCATG00000033497	RC3H1	100	97.188	ENSPTIG00000015326	RC3H1	100	97.188	Panthera_tigris_altaica
ENSCATG00000033497	RC3H1	100	99.383	ENSPTRG00000001702	RC3H1	100	99.383	Pan_troglodytes
ENSCATG00000033497	RC3H1	100	99.912	ENSPANG00000008886	RC3H1	100	99.912	Papio_anubis
ENSCATG00000033497	RC3H1	100	89.045	ENSPSIG00000016181	RC3H1	100	89.308	Pelodiscus_sinensis
ENSCATG00000033497	RC3H1	100	93.910	ENSPEMG00000011966	Rc3h1	100	93.557	Peromyscus_maniculatus_bairdii
ENSCATG00000033497	RC3H1	70	94.430	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSCATG00000033497	RC3H1	100	95.940	ENSPPYG00000000490	RC3H1	98	98.565	Pongo_abelii
ENSCATG00000033497	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSCATG00000033497	RC3H1	83	96.902	ENSPCOG00000021795	RC3H1	96	96.902	Propithecus_coquereli
ENSCATG00000033497	RC3H1	100	87.996	ENSPVAG00000007593	RC3H1	100	87.996	Pteropus_vampyrus
ENSCATG00000033497	RC3H1	97	61.778	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSCATG00000033497	RC3H1	100	99.824	ENSRBIG00000037743	RC3H1	100	99.824	Rhinopithecus_bieti
ENSCATG00000033497	RC3H1	100	99.647	ENSRROG00000036546	RC3H1	100	99.647	Rhinopithecus_roxellana
ENSCATG00000033497	RC3H1	93	89.583	ENSSBOG00000010664	RC3H1	100	92.621	Saimiri_boliviensis_boliviensis
ENSCATG00000033497	RC3H1	100	91.366	ENSSHAG00000007589	RC3H1	100	91.454	Sarcophilus_harrisii
ENSCATG00000033497	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSCATG00000033497	RC3H1	100	84.588	ENSSPUG00000018472	RC3H1	100	84.049	Sphenodon_punctatus
ENSCATG00000033497	RC3H1	100	97.529	ENSSSCG00000015498	RC3H1	100	97.529	Sus_scrofa
ENSCATG00000033497	RC3H1	100	87.719	ENSTGUG00000004090	RC3H1	100	87.719	Taeniopygia_guttata
ENSCATG00000033497	RC3H1	89	97.561	ENSTBEG00000005015	RC3H1	89	97.561	Tupaia_belangeri
ENSCATG00000033497	RC3H1	100	96.740	ENSTTRG00000008572	RC3H1	100	96.740	Tursiops_truncatus
ENSCATG00000033497	RC3H1	100	96.470	ENSUAMG00000019525	RC3H1	100	96.470	Ursus_americanus
ENSCATG00000033497	RC3H1	100	97.090	ENSUMAG00000020087	RC3H1	100	97.090	Ursus_maritimus
ENSCATG00000033497	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSCATG00000033497	RC3H1	100	96.834	ENSVVUG00000014201	RC3H1	100	96.834	Vulpes_vulpes
ENSCATG00000033497	RC3H1	100	79.199	ENSXETG00000020030	rc3h1	100	78.746	Xenopus_tropicalis