EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000033816 (Gene tree)
Gene ID: 105572140
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 2510288 bases
Position: chrKQ011696.1:2654058-5164345
Accession: 105572140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000020648	Fox-1_C	PF12414.8	1.2e-42	1	1
ENSCATP00000020622	Fox-1_C	PF12414.8	2e-42	1	1
ENSCATP00000020638	Fox-1_C	PF12414.8	2e-40	1	1
ENSCATP00000020634	Fox-1_C	PF12414.8	2.9e-40	1	1
ENSCATP00000020631	Fox-1_C	PF12414.8	3e-40	1	1
ENSCATP00000020600	Fox-1_C	PF12414.8	4e-40	1	1
ENSCATP00000020585	Fox-1_C	PF12414.8	5.7e-40	1	1
ENSCATP00000020643	Fox-1_C	PF12414.8	4.3e-38	1	1
ENSCATP00000020664	Fox-1_C	PF12414.8	1.2e-20	1	1
ENSCATP00000020664	RRM_1	PF00076.22	4.2e-18	1	1
ENSCATP00000020648	RRM_1	PF00076.22	4.6e-18	1	1
ENSCATP00000020638	RRM_1	PF00076.22	4.9e-18	1	1
ENSCATP00000020643	RRM_1	PF00076.22	5.3e-18	1	1
ENSCATP00000020622	RRM_1	PF00076.22	5.5e-18	1	1
ENSCATP00000020600	RRM_1	PF00076.22	6.3e-18	1	1
ENSCATP00000020585	RRM_1	PF00076.22	8.7e-18	1	1
ENSCATP00000020631	RRM_1	PF00076.22	8.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000044856	RBFOX1-209	1080	-	ENSCATP00000020664	359 (aa)	-	A0A2K5M647
ENSCATT00000044777	RBFOX1-201	1740	-	ENSCATP00000020585	579 (aa)	-	A0A2K5M5W6
ENSCATT00000044826	RBFOX1-205	1143	-	ENSCATP00000020634	380 (aa)	-	A0A2K5M616
ENSCATT00000044840	RBFOX1-208	1128	XM_012030445	ENSCATP00000020648	375 (aa)	XP_011885835	A0A2K5M625
ENSCATT00000044814	RBFOX1-203	1278	XM_012030436	ENSCATP00000020622	425 (aa)	XP_011885826	A0A2K5M5Z8
ENSCATT00000044823	RBFOX1-204	1176	XM_012030428	ENSCATP00000020631	391 (aa)	XP_011885818	A0A2K5M622
ENSCATT00000044830	RBFOX1-206	1257	XM_012030422	ENSCATP00000020638	418 (aa)	XP_011885812	A0A2K5M613
ENSCATT00000044792	RBFOX1-202	1401	XM_012030421	ENSCATP00000020600	466 (aa)	XP_011885811	A0A2K5M5Y0
ENSCATT00000044835	RBFOX1-207	1429	XM_012030423	ENSCATP00000020643	444 (aa)	XP_011885813	A0A2K5M618

Gene Model

Click here to download ENSCATG00000033816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000033816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000033816	RBFOX1	97	62.808	ENSCATG00000038655	RBFOX2	96	65.508
ENSCATG00000033816	RBFOX1	79	78.333	ENSCATG00000018349	RBFOX3	100	77.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000033816	RBFOX1	100	100.000	ENSG00000078328	RBFOX1	100	100.000	Homo_sapiens
ENSCATG00000033816	RBFOX1	97	81.316	ENSAPOG00000003197	rbfox1	98	81.365	Acanthochromis_polyacanthus
ENSCATG00000033816	RBFOX1	61	97.391	ENSAMEG00000008605	RBFOX1	100	96.000	Ailuropoda_melanoleuca
ENSCATG00000033816	RBFOX1	64	71.375	ENSACIG00000005478	rbfox1	68	71.375	Amphilophus_citrinellus
ENSCATG00000033816	RBFOX1	70	78.214	ENSAOCG00000008283	rbfox1	96	77.857	Amphiprion_ocellaris
ENSCATG00000033816	RBFOX1	93	71.390	ENSAPEG00000010636	rbfox1	100	71.274	Amphiprion_percula
ENSCATG00000033816	RBFOX1	70	76.408	ENSATEG00000007513	rbfox1	97	75.704	Anabas_testudineus
ENSCATG00000033816	RBFOX1	94	92.602	ENSAPLG00000013263	RBFOX1	98	92.602	Anas_platyrhynchos
ENSCATG00000033816	RBFOX1	97	84.949	ENSACAG00000004013	RBFOX1	98	86.005	Anolis_carolinensis
ENSCATG00000033816	RBFOX1	100	99.744	ENSANAG00000029527	RBFOX1	100	99.744	Aotus_nancymaae
ENSCATG00000033816	RBFOX1	64	86.147	ENSAMXG00000002431	rbfox1	64	89.498	Astyanax_mexicanus
ENSCATG00000033816	RBFOX1	99	92.800	ENSBTAG00000007210	RBFOX1	98	98.462	Bos_taurus
ENSCATG00000033816	RBFOX1	100	99.488	ENSCJAG00000017351	RBFOX1	100	99.488	Callithrix_jacchus
ENSCATG00000033816	RBFOX1	100	98.804	ENSCAFG00000019082	RBFOX1	100	99.241	Canis_familiaris
ENSCATG00000033816	RBFOX1	98	88.636	ENSCAFG00020024881	RBFOX1	100	85.606	Canis_lupus_dingo
ENSCATG00000033816	RBFOX1	99	92.800	ENSCHIG00000023549	RBFOX1	100	98.481	Capra_hircus
ENSCATG00000033816	RBFOX1	96	99.169	ENSTSYG00000005334	RBFOX1	100	99.229	Carlito_syrichta
ENSCATG00000033816	RBFOX1	100	97.368	ENSCAPG00000017669	RBFOX1	100	97.368	Cavia_aperea
ENSCATG00000033816	RBFOX1	100	97.368	ENSCPOG00000011314	RBFOX1	100	97.368	Cavia_porcellus
ENSCATG00000033816	RBFOX1	100	99.522	ENSCCAG00000023031	RBFOX1	100	99.766	Cebus_capucinus
ENSCATG00000033816	RBFOX1	100	97.847	ENSCLAG00000012761	RBFOX1	100	97.847	Chinchilla_lanigera
ENSCATG00000033816	RBFOX1	99	93.867	ENSCSAG00000008739	RBFOX1	98	98.919	Chlorocebus_sabaeus
ENSCATG00000033816	RBFOX1	100	76.316	ENSCHOG00000012843	RBFOX1	100	76.316	Choloepus_hoffmanni
ENSCATG00000033816	RBFOX1	97	95.330	ENSCPBG00000026626	RBFOX1	98	94.615	Chrysemys_picta_bellii
ENSCATG00000033816	RBFOX1	100	100.000	ENSCANG00000033125	RBFOX1	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000033816	RBFOX1	100	97.608	ENSCGRG00001013729	Rbfox1	100	97.608	Cricetulus_griseus_chok1gshd
ENSCATG00000033816	RBFOX1	100	97.608	ENSCGRG00000003272	Rbfox1	100	97.608	Cricetulus_griseus_crigri
ENSCATG00000033816	RBFOX1	93	76.216	ENSCSEG00000008840	rbfox1	100	76.216	Cynoglossus_semilaevis
ENSCATG00000033816	RBFOX1	97	88.430	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSCATG00000033816	RBFOX1	96	94.045	ENSDNOG00000043612	RBFOX1	96	94.045	Dasypus_novemcinctus
ENSCATG00000033816	RBFOX1	93	93.893	ENSDORG00000010024	Rbfox1	100	93.316	Dipodomys_ordii
ENSCATG00000033816	RBFOX1	100	78.947	ENSETEG00000003771	RBFOX1	100	78.947	Echinops_telfairi
ENSCATG00000033816	RBFOX1	97	98.765	ENSEASG00005011599	RBFOX1	100	98.987	Equus_asinus_asinus
ENSCATG00000033816	RBFOX1	97	98.519	ENSECAG00000012667	RBFOX1	100	98.734	Equus_caballus
ENSCATG00000033816	RBFOX1	83	73.832	ENSELUG00000013096	rbfox1	100	52.520	Esox_lucius
ENSCATG00000033816	RBFOX1	100	99.233	ENSFCAG00000025322	RBFOX1	100	99.233	Felis_catus
ENSCATG00000033816	RBFOX1	86	88.379	ENSFALG00000004027	RBFOX1	100	92.793	Ficedula_albicollis
ENSCATG00000033816	RBFOX1	100	97.847	ENSFDAG00000007388	RBFOX1	100	97.847	Fukomys_damarensis
ENSCATG00000033816	RBFOX1	100	93.301	ENSGALG00000034325	RBFOX1	100	93.301	Gallus_gallus
ENSCATG00000033816	RBFOX1	100	92.823	ENSGAGG00000023681	RBFOX1	100	92.911	Gopherus_agassizii
ENSCATG00000033816	RBFOX1	100	100.000	ENSGGOG00000016871	-	100	100.000	Gorilla_gorilla
ENSCATG00000033816	RBFOX1	100	97.608	ENSHGLG00000016944	RBFOX1	100	97.608	Heterocephalus_glaber_female
ENSCATG00000033816	RBFOX1	100	97.608	ENSHGLG00100003272	RBFOX1	100	97.608	Heterocephalus_glaber_male
ENSCATG00000033816	RBFOX1	83	76.562	ENSHCOG00000016419	rbfox1	91	76.562	Hippocampus_comes
ENSCATG00000033816	RBFOX1	93	90.857	ENSIPUG00000015215	rbfox1	100	90.857	Ictalurus_punctatus
ENSCATG00000033816	RBFOX1	100	96.890	ENSSTOG00000000322	RBFOX1	100	96.890	Ictidomys_tridecemlineatus
ENSCATG00000033816	RBFOX1	100	94.498	ENSJJAG00000002575	Rbfox1	100	94.498	Jaculus_jaculus
ENSCATG00000033816	RBFOX1	93	78.533	ENSLBEG00000014659	rbfox1	97	78.533	Labrus_bergylta
ENSCATG00000033816	RBFOX1	97	86.041	ENSLOCG00000006675	rbfox1	99	86.041	Lepisosteus_oculatus
ENSCATG00000033816	RBFOX1	74	99.351	ENSLAFG00000011480	RBFOX1	100	99.351	Loxodonta_africana
ENSCATG00000033816	RBFOX1	100	99.785	ENSMFAG00000036447	RBFOX1	100	99.785	Macaca_fascicularis
ENSCATG00000033816	RBFOX1	100	99.785	ENSMMUG00000003458	RBFOX1	100	99.785	Macaca_mulatta
ENSCATG00000033816	RBFOX1	100	99.785	ENSMNEG00000032034	RBFOX1	100	99.785	Macaca_nemestrina
ENSCATG00000033816	RBFOX1	100	100.000	ENSMLEG00000015382	RBFOX1	100	100.000	Mandrillus_leucophaeus
ENSCATG00000033816	RBFOX1	93	80.548	ENSMAMG00000003142	rbfox1	100	81.096	Mastacembelus_armatus
ENSCATG00000033816	RBFOX1	81	87.586	ENSMGAG00000008606	RBFOX1	98	87.368	Meleagris_gallopavo
ENSCATG00000033816	RBFOX1	95	54.301	ENSMAUG00000020570	Rbfox1	96	55.699	Mesocricetus_auratus
ENSCATG00000033816	RBFOX1	100	99.233	ENSMICG00000034286	RBFOX1	100	99.233	Microcebus_murinus
ENSCATG00000033816	RBFOX1	100	97.608	ENSMOCG00000020932	Rbfox1	100	97.608	Microtus_ochrogaster
ENSCATG00000033816	RBFOX1	84	77.044	ENSMMOG00000009716	rbfox1	86	77.885	Mola_mola
ENSCATG00000033816	RBFOX1	94	92.938	ENSMODG00000005826	RBFOX1	100	97.740	Monodelphis_domestica
ENSCATG00000033816	RBFOX1	97	81.915	ENSMALG00000003337	rbfox1	98	81.600	Monopterus_albus
ENSCATG00000033816	RBFOX1	100	97.847	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.847	Mus_caroli
ENSCATG00000033816	RBFOX1	100	97.608	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSCATG00000033816	RBFOX1	100	97.847	MGP_PahariEiJ_G0016135	Rbfox1	100	97.847	Mus_pahari
ENSCATG00000033816	RBFOX1	100	97.368	MGP_SPRETEiJ_G0021321	Rbfox1	100	97.368	Mus_spretus
ENSCATG00000033816	RBFOX1	98	93.750	ENSMPUG00000014822	RBFOX1	100	96.709	Mustela_putorius_furo
ENSCATG00000033816	RBFOX1	74	97.078	ENSMLUG00000015896	RBFOX1	100	97.078	Myotis_lucifugus
ENSCATG00000033816	RBFOX1	100	98.086	ENSNGAG00000023276	Rbfox1	100	98.086	Nannospalax_galili
ENSCATG00000033816	RBFOX1	100	61.429	ENSNBRG00000011084	rbfox1	98	61.429	Neolamprologus_brichardi
ENSCATG00000033816	RBFOX1	100	99.761	ENSNLEG00000010017	-	100	99.761	Nomascus_leucogenys
ENSCATG00000033816	RBFOX1	100	80.622	ENSMEUG00000012525	RBFOX1	100	80.622	Notamacropus_eugenii
ENSCATG00000033816	RBFOX1	88	97.391	ENSOPRG00000006199	-	100	80.383	Ochotona_princeps
ENSCATG00000033816	RBFOX1	100	97.129	ENSODEG00000013166	RBFOX1	100	97.129	Octodon_degus
ENSCATG00000033816	RBFOX1	99	90.400	ENSOANG00000002379	RBFOX1	98	95.676	Ornithorhynchus_anatinus
ENSCATG00000033816	RBFOX1	62	95.475	ENSOCUG00000001205	-	100	94.222	Oryctolagus_cuniculus
ENSCATG00000033816	RBFOX1	94	97.187	ENSOGAG00000025535	RBFOX1	98	97.187	Otolemur_garnettii
ENSCATG00000033816	RBFOX1	68	86.531	ENSOARG00000005135	RBFOX1	99	93.074	Ovis_aries
ENSCATG00000033816	RBFOX1	100	100.000	ENSPPAG00000036238	-	100	100.000	Pan_paniscus
ENSCATG00000033816	RBFOX1	100	99.233	ENSPPRG00000006546	RBFOX1	100	99.233	Panthera_pardus
ENSCATG00000033816	RBFOX1	96	85.366	ENSPTIG00000021154	RBFOX1	99	85.014	Panthera_tigris_altaica
ENSCATG00000033816	RBFOX1	100	100.000	ENSPTRG00000007744	RBFOX1	100	100.000	Pan_troglodytes
ENSCATG00000033816	RBFOX1	100	100.000	ENSPANG00000026500	RBFOX1	100	100.000	Papio_anubis
ENSCATG00000033816	RBFOX1	71	92.857	ENSPKIG00000019353	rbfox1	86	92.453	Paramormyrops_kingsleyae
ENSCATG00000033816	RBFOX1	97	89.041	ENSPKIG00000009667	-	95	90.616	Paramormyrops_kingsleyae
ENSCATG00000033816	RBFOX1	93	92.821	ENSPSIG00000006523	RBFOX1	97	92.821	Pelodiscus_sinensis
ENSCATG00000033816	RBFOX1	100	97.847	ENSPEMG00000017607	Rbfox1	100	97.847	Peromyscus_maniculatus_bairdii
ENSCATG00000033816	RBFOX1	70	93.893	ENSPCIG00000026887	RBFOX1	100	91.468	Phascolarctos_cinereus
ENSCATG00000033816	RBFOX1	98	94.565	ENSPPYG00000007079	-	100	97.975	Pongo_abelii
ENSCATG00000033816	RBFOX1	90	89.418	ENSPCAG00000002630	RBFOX1	100	89.418	Procavia_capensis
ENSCATG00000033816	RBFOX1	100	99.043	ENSPCOG00000025687	RBFOX1	100	99.043	Propithecus_coquereli
ENSCATG00000033816	RBFOX1	100	94.019	ENSPVAG00000013467	RBFOX1	100	94.019	Pteropus_vampyrus
ENSCATG00000033816	RBFOX1	93	87.838	ENSPNAG00000023109	rbfox1	100	87.838	Pygocentrus_nattereri
ENSCATG00000033816	RBFOX1	100	95.215	ENSRNOG00000002827	Rbfox1	100	95.215	Rattus_norvegicus
ENSCATG00000033816	RBFOX1	96	100.000	ENSRBIG00000044478	RBFOX1	100	100.000	Rhinopithecus_bieti
ENSCATG00000033816	RBFOX1	100	100.000	ENSRROG00000044411	RBFOX1	100	100.000	Rhinopithecus_roxellana
ENSCATG00000033816	RBFOX1	100	99.488	ENSSBOG00000033726	RBFOX1	100	99.747	Saimiri_boliviensis_boliviensis
ENSCATG00000033816	RBFOX1	97	90.000	ENSSHAG00000009257	RBFOX1	100	90.423	Sarcophilus_harrisii
ENSCATG00000033816	RBFOX1	97	77.348	ENSSFOG00015023675	rbfox1	97	86.667	Scleropages_formosus
ENSCATG00000033816	RBFOX1	89	73.761	ENSSFOG00015009955	-	87	73.761	Scleropages_formosus
ENSCATG00000033816	RBFOX1	97	82.415	ENSSMAG00000015505	rbfox1	93	82.152	Scophthalmus_maximus
ENSCATG00000033816	RBFOX1	97	79.620	ENSSDUG00000016413	rbfox1	99	79.726	Seriola_dumerili
ENSCATG00000033816	RBFOX1	83	78.594	ENSSLDG00000009353	rbfox1	95	78.146	Seriola_lalandi_dorsalis
ENSCATG00000033816	RBFOX1	83	89.776	ENSSPUG00000009732	RBFOX1	87	89.776	Sphenodon_punctatus
ENSCATG00000033816	RBFOX1	100	78.042	ENSSPAG00000009723	rbfox1	100	81.003	Stegastes_partitus
ENSCATG00000033816	RBFOX1	100	98.649	ENSSSCG00000007917	RBFOX1	100	98.870	Sus_scrofa
ENSCATG00000033816	RBFOX1	93	92.821	ENSTGUG00000004562	RBFOX1	100	92.821	Taeniopygia_guttata
ENSCATG00000033816	RBFOX1	97	80.739	ENSTRUG00000020940	rbfox1	99	81.003	Takifugu_rubripes
ENSCATG00000033816	RBFOX1	64	62.718	ENSTNIG00000002567	rbfox1	100	64.460	Tetraodon_nigroviridis
ENSCATG00000033816	RBFOX1	81	89.655	ENSTBEG00000009169	-	81	89.655	Tupaia_belangeri
ENSCATG00000033816	RBFOX1	100	98.086	ENSTTRG00000005700	RBFOX1	100	98.086	Tursiops_truncatus
ENSCATG00000033816	RBFOX1	98	98.580	ENSUAMG00000024633	RBFOX1	100	94.192	Ursus_americanus
ENSCATG00000033816	RBFOX1	98	88.636	ENSUMAG00000003579	RBFOX1	99	85.570	Ursus_maritimus
ENSCATG00000033816	RBFOX1	81	99.351	ENSVPAG00000001284	RBFOX1	81	99.351	Vicugna_pacos
ENSCATG00000033816	RBFOX1	97	98.626	ENSVVUG00000017311	RBFOX1	98	98.378	Vulpes_vulpes