EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000033830 (Gene tree)
Gene ID: 105586965
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 58146 bases
Position: chrKQ009636.1:403661-461806
Accession: 105586965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000020337	ResIII	PF04851.15	1.7e-07	1	1
ENSCATP00000020418	ResIII	PF04851.15	3e-07	1	1
ENSCATP00000020410	ResIII	PF04851.15	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000044606	HELLS-203	2220	-	ENSCATP00000020415	739 (aa)	-	A0A2K5M5D7
ENSCATT00000044602	HELLS-202	2652	XM_012062644	ENSCATP00000020410	883 (aa)	XP_011918034	A0A2K5M5C9
ENSCATT00000044613	HELLS-205	294	-	ENSCATP00000020421	97 (aa)	-	A0A2K5M5F4
ENSCATT00000044610	HELLS-204	2100	-	ENSCATP00000020418	699 (aa)	-	A0A2K5M5D9
ENSCATT00000044615	HELLS-206	291	-	ENSCATP00000020423	96 (aa)	-	A0A2K5M5E5
ENSCATT00000044527	HELLS-201	7101	XM_012062653	ENSCATP00000020337	713 (aa)	XP_011918043	A0A2K5M574

Gene Model

Click here to download ENSCATG00000033830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000033830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000033830	HELLS	77	40.850	ENSCATG00000031044	CHD1L	51	40.850
ENSCATG00000033830	HELLS	83	37.789	ENSCATG00000039248	CHD6	68	35.347
ENSCATG00000033830	HELLS	78	48.207	ENSCATG00000015921	SMARCA1	52	48.207
ENSCATG00000033830	HELLS	60	39.216	ENSCATG00000030661	-	59	39.216
ENSCATG00000033830	HELLS	64	34.579	ENSCATG00000030589	RAD54L	64	34.579
ENSCATG00000033830	HELLS	77	37.705	ENSCATG00000035663	SMARCAD1	59	37.660

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000033830	HELLS	100	98.880	ENSG00000119969	HELLS	100	98.880	Homo_sapiens
ENSCATG00000033830	HELLS	97	67.643	ENSAPOG00000007707	hells	99	59.390	Acanthochromis_polyacanthus
ENSCATG00000033830	HELLS	100	95.792	ENSAMEG00000013525	HELLS	100	89.593	Ailuropoda_melanoleuca
ENSCATG00000033830	HELLS	96	67.643	ENSACIG00000018996	hells	99	66.478	Amphilophus_citrinellus
ENSCATG00000033830	HELLS	98	67.379	ENSAOCG00000006348	hells	97	60.909	Amphiprion_ocellaris
ENSCATG00000033830	HELLS	99	66.246	ENSAPEG00000001422	hells	97	60.455	Amphiprion_percula
ENSCATG00000033830	HELLS	99	67.280	ENSATEG00000008107	hells	99	59.767	Anabas_testudineus
ENSCATG00000033830	HELLS	99	83.711	ENSAPLG00000002649	HELLS	99	77.256	Anas_platyrhynchos
ENSCATG00000033830	HELLS	99	75.630	ENSACAG00000028785	HELLS	95	75.630	Anolis_carolinensis
ENSCATG00000033830	HELLS	100	97.199	ENSANAG00000034765	-	100	96.429	Aotus_nancymaae
ENSCATG00000033830	HELLS	99	66.522	ENSACLG00000007613	hells	99	60.117	Astatotilapia_calliptera
ENSCATG00000033830	HELLS	96	67.344	ENSAMXG00000002088	hells	99	67.350	Astyanax_mexicanus
ENSCATG00000033830	HELLS	96	94.486	ENSBTAG00000005979	HELLS	100	94.486	Bos_taurus
ENSCATG00000033830	HELLS	100	97.059	ENSCJAG00000015819	HELLS	100	96.286	Callithrix_jacchus
ENSCATG00000033830	HELLS	99	96.213	ENSCAFG00000008090	HELLS	100	89.379	Canis_familiaris
ENSCATG00000033830	HELLS	100	96.353	ENSCAFG00020004809	HELLS	98	90.625	Canis_lupus_dingo
ENSCATG00000033830	HELLS	100	92.567	ENSCHIG00000019462	HELLS	100	86.070	Capra_hircus
ENSCATG00000033830	HELLS	100	93.857	ENSTSYG00000005811	-	100	93.857	Carlito_syrichta
ENSCATG00000033830	HELLS	100	93.417	ENSCPOG00000003043	HELLS	100	88.009	Cavia_porcellus
ENSCATG00000033830	HELLS	66	95.455	ENSCCAG00000026761	HELLS	99	95.455	Cebus_capucinus
ENSCATG00000033830	HELLS	100	93.978	ENSCLAG00000003938	HELLS	100	88.594	Chinchilla_lanigera
ENSCATG00000033830	HELLS	100	99.860	ENSCSAG00000006181	HELLS	100	99.860	Chlorocebus_sabaeus
ENSCATG00000033830	HELLS	100	82.378	ENSCPBG00000025739	HELLS	99	84.195	Chrysemys_picta_bellii
ENSCATG00000033830	HELLS	100	99.719	ENSCANG00000037736	HELLS	100	99.719	Colobus_angolensis_palliatus
ENSCATG00000033830	HELLS	100	92.437	ENSCGRG00001017410	Hells	100	85.352	Cricetulus_griseus_chok1gshd
ENSCATG00000033830	HELLS	98	66.618	ENSCSEG00000016985	hells	99	60.896	Cynoglossus_semilaevis
ENSCATG00000033830	HELLS	74	62.167	ENSCVAG00000000159	hells	97	62.101	Cyprinodon_variegatus
ENSCATG00000033830	HELLS	99	68.067	ENSDARG00000057738	hells	97	61.808	Danio_rerio
ENSCATG00000033830	HELLS	91	95.103	ENSDNOG00000017758	HELLS	100	95.103	Dasypus_novemcinctus
ENSCATG00000033830	HELLS	100	92.997	ENSDORG00000011812	Hells	100	87.104	Dipodomys_ordii
ENSCATG00000033830	HELLS	71	63.158	ENSEBUG00000016152	hells	75	63.158	Eptatretus_burgeri
ENSCATG00000033830	HELLS	100	96.353	ENSEASG00005011764	HELLS	100	89.819	Equus_asinus_asinus
ENSCATG00000033830	HELLS	100	96.073	ENSECAG00000018810	HELLS	100	89.694	Equus_caballus
ENSCATG00000033830	HELLS	82	94.565	ENSEEUG00000007680	HELLS	91	94.565	Erinaceus_europaeus
ENSCATG00000033830	HELLS	99	66.432	ENSELUG00000014909	hells	93	60.793	Esox_lucius
ENSCATG00000033830	HELLS	100	96.213	ENSFCAG00000005206	HELLS	100	96.213	Felis_catus
ENSCATG00000033830	HELLS	99	82.659	ENSFALG00000007136	HELLS	99	76.817	Ficedula_albicollis
ENSCATG00000033830	HELLS	100	93.697	ENSFDAG00000010042	HELLS	100	87.903	Fukomys_damarensis
ENSCATG00000033830	HELLS	99	65.401	ENSFHEG00000022950	hells	97	63.904	Fundulus_heteroclitus
ENSCATG00000033830	HELLS	99	82.878	ENSGALG00000005451	HELLS	100	83.095	Gallus_gallus
ENSCATG00000033830	HELLS	99	66.011	ENSGAFG00000001204	hells	97	59.526	Gambusia_affinis
ENSCATG00000033830	HELLS	99	65.585	ENSGACG00000003897	hells	91	60.843	Gasterosteus_aculeatus
ENSCATG00000033830	HELLS	99	83.573	ENSGAGG00000010269	HELLS	100	83.788	Gopherus_agassizii
ENSCATG00000033830	HELLS	100	98.739	ENSGGOG00000008103	HELLS	100	98.739	Gorilla_gorilla
ENSCATG00000033830	HELLS	99	66.855	ENSHBUG00000010270	hells	99	60.117	Haplochromis_burtoni
ENSCATG00000033830	HELLS	85	90.184	ENSHGLG00000006537	-	100	90.184	Heterocephalus_glaber_female
ENSCATG00000033830	HELLS	100	94.258	ENSHGLG00000011377	-	100	88.710	Heterocephalus_glaber_female
ENSCATG00000033830	HELLS	99	84.085	ENSHGLG00100001957	-	93	84.085	Heterocephalus_glaber_male
ENSCATG00000033830	HELLS	100	93.978	ENSHGLG00100017230	-	100	88.479	Heterocephalus_glaber_male
ENSCATG00000033830	HELLS	99	66.102	ENSHCOG00000001119	hells	96	66.102	Hippocampus_comes
ENSCATG00000033830	HELLS	99	66.620	ENSIPUG00000002634	HELLS	97	60.000	Ictalurus_punctatus
ENSCATG00000033830	HELLS	100	95.798	ENSSTOG00000021976	HELLS	100	89.631	Ictidomys_tridecemlineatus
ENSCATG00000033830	HELLS	98	91.520	ENSJJAG00000000865	Hells	99	81.977	Jaculus_jaculus
ENSCATG00000033830	HELLS	98	67.382	ENSKMAG00000017279	hells	95	61.600	Kryptolebias_marmoratus
ENSCATG00000033830	HELLS	99	68.265	ENSLBEG00000027807	hells	96	61.371	Labrus_bergylta
ENSCATG00000033830	HELLS	100	95.518	ENSLAFG00000007049	HELLS	100	89.977	Loxodonta_africana
ENSCATG00000033830	HELLS	100	100.000	ENSMFAG00000044053	HELLS	100	100.000	Macaca_fascicularis
ENSCATG00000033830	HELLS	99	100.000	ENSMMUG00000017255	HELLS	100	100.000	Macaca_mulatta
ENSCATG00000033830	HELLS	100	100.000	ENSMNEG00000042628	HELLS	100	100.000	Macaca_nemestrina
ENSCATG00000033830	HELLS	100	100.000	ENSMLEG00000041751	HELLS	100	100.000	Mandrillus_leucophaeus
ENSCATG00000033830	HELLS	98	66.957	ENSMAMG00000009850	hells	98	66.957	Mastacembelus_armatus
ENSCATG00000033830	HELLS	99	66.855	ENSMZEG00005018414	hells	99	60.117	Maylandia_zebra
ENSCATG00000033830	HELLS	99	82.496	ENSMGAG00000006818	HELLS	97	82.727	Meleagris_gallopavo
ENSCATG00000033830	HELLS	100	92.297	ENSMAUG00000021941	Hells	97	84.953	Mesocricetus_auratus
ENSCATG00000033830	HELLS	82	93.554	ENSMICG00000046554	-	95	93.554	Microcebus_murinus
ENSCATG00000033830	HELLS	100	92.437	ENSMOCG00000019342	Hells	100	85.023	Microtus_ochrogaster
ENSCATG00000033830	HELLS	99	62.906	ENSMMOG00000007950	hells	97	57.558	Mola_mola
ENSCATG00000033830	HELLS	100	86.313	ENSMODG00000005589	-	51	80.710	Monodelphis_domestica
ENSCATG00000033830	HELLS	99	65.537	ENSMALG00000010244	hells	94	57.895	Monopterus_albus
ENSCATG00000033830	HELLS	100	92.577	MGP_CAROLIEiJ_G0022930	Hells	100	86.290	Mus_caroli
ENSCATG00000033830	HELLS	100	92.437	ENSMUSG00000025001	Hells	100	86.290	Mus_musculus
ENSCATG00000033830	HELLS	100	93.277	MGP_PahariEiJ_G0014423	Hells	100	87.212	Mus_pahari
ENSCATG00000033830	HELLS	100	92.997	MGP_SPRETEiJ_G0023848	Hells	100	86.521	Mus_spretus
ENSCATG00000033830	HELLS	100	95.652	ENSMPUG00000017131	HELLS	100	89.354	Mustela_putorius_furo
ENSCATG00000033830	HELLS	100	92.987	ENSMLUG00000030511	HELLS	100	86.183	Myotis_lucifugus
ENSCATG00000033830	HELLS	100	92.577	ENSNGAG00000014049	Hells	100	86.425	Nannospalax_galili
ENSCATG00000033830	HELLS	99	62.518	ENSNBRG00000024242	hells	99	56.959	Neolamprologus_brichardi
ENSCATG00000033830	HELLS	100	98.739	ENSNLEG00000012987	HELLS	100	98.739	Nomascus_leucogenys
ENSCATG00000033830	HELLS	100	91.457	ENSODEG00000015916	HELLS	100	85.294	Octodon_degus
ENSCATG00000033830	HELLS	98	66.809	ENSONIG00000013166	hells	97	60.000	Oreochromis_niloticus
ENSCATG00000033830	HELLS	100	85.734	ENSOANG00000005139	HELLS	100	80.619	Ornithorhynchus_anatinus
ENSCATG00000033830	HELLS	100	95.512	ENSOCUG00000026731	HELLS	100	88.901	Oryctolagus_cuniculus
ENSCATG00000033830	HELLS	98	66.667	ENSORLG00000000987	hells	97	60.045	Oryzias_latipes
ENSCATG00000033830	HELLS	98	66.522	ENSORLG00020003952	hells	97	59.930	Oryzias_latipes_hni
ENSCATG00000033830	HELLS	99	66.152	ENSORLG00015010960	hells	97	59.708	Oryzias_latipes_hsok
ENSCATG00000033830	HELLS	98	66.378	ENSOMEG00000000135	hells	95	60.433	Oryzias_melastigma
ENSCATG00000033830	HELLS	100	94.818	ENSOGAG00000017145	HELLS	99	88.902	Otolemur_garnettii
ENSCATG00000033830	HELLS	100	94.530	ENSOARG00000004495	HELLS	100	88.562	Ovis_aries
ENSCATG00000033830	HELLS	100	98.599	ENSPPAG00000001726	HELLS	100	98.599	Pan_paniscus
ENSCATG00000033830	HELLS	100	96.213	ENSPPRG00000005839	HELLS	100	96.213	Panthera_pardus
ENSCATG00000033830	HELLS	100	96.213	ENSPTIG00000007647	HELLS	100	96.213	Panthera_tigris_altaica
ENSCATG00000033830	HELLS	100	98.429	ENSPTRG00000002778	HELLS	100	98.429	Pan_troglodytes
ENSCATG00000033830	HELLS	100	100.000	ENSPANG00000033528	HELLS	100	100.000	Papio_anubis
ENSCATG00000033830	HELLS	99	66.104	ENSPKIG00000010890	hells	99	59.170	Paramormyrops_kingsleyae
ENSCATG00000033830	HELLS	99	83.404	ENSPSIG00000005462	HELLS	100	77.446	Pelodiscus_sinensis
ENSCATG00000033830	HELLS	99	65.805	ENSPMGG00000014690	hells	98	66.521	Periophthalmus_magnuspinnatus
ENSCATG00000033830	HELLS	100	82.889	ENSPEMG00000017579	Hells	100	90.379	Peromyscus_maniculatus_bairdii
ENSCATG00000033830	HELLS	99	62.254	ENSPMAG00000004376	hells	98	57.093	Petromyzon_marinus
ENSCATG00000033830	HELLS	100	86.173	ENSPCIG00000013361	HELLS	100	80.496	Phascolarctos_cinereus
ENSCATG00000033830	HELLS	99	65.455	ENSPFOG00000001954	hells	97	59.188	Poecilia_formosa
ENSCATG00000033830	HELLS	99	65.309	ENSPLAG00000006504	hells	97	64.553	Poecilia_latipinna
ENSCATG00000033830	HELLS	99	65.449	ENSPMEG00000003024	hells	97	64.986	Poecilia_mexicana
ENSCATG00000033830	HELLS	99	65.449	ENSPREG00000020337	hells	97	59.188	Poecilia_reticulata
ENSCATG00000033830	HELLS	100	98.303	ENSPPYG00000002502	HELLS	100	98.303	Pongo_abelii
ENSCATG00000033830	HELLS	99	91.342	ENSPCAG00000013618	HELLS	100	82.805	Procavia_capensis
ENSCATG00000033830	HELLS	100	95.933	ENSPCOG00000023985	HELLS	100	95.565	Propithecus_coquereli
ENSCATG00000033830	HELLS	90	96.685	ENSPVAG00000017899	HELLS	88	96.685	Pteropus_vampyrus
ENSCATG00000033830	HELLS	99	65.072	ENSPNYG00000009100	hells	99	58.899	Pundamilia_nyererei
ENSCATG00000033830	HELLS	96	66.667	ENSPNAG00000029968	hells	96	60.119	Pygocentrus_nattereri
ENSCATG00000033830	HELLS	100	93.137	ENSRNOG00000047692	LOC100911660	100	87.097	Rattus_norvegicus
ENSCATG00000033830	HELLS	100	93.137	ENSRNOG00000047104	Hells	100	86.765	Rattus_norvegicus
ENSCATG00000033830	HELLS	99	98.410	ENSRBIG00000041080	HELLS	100	98.410	Rhinopithecus_bieti
ENSCATG00000033830	HELLS	100	99.579	ENSRROG00000040169	HELLS	100	99.579	Rhinopithecus_roxellana
ENSCATG00000033830	HELLS	99	86.294	ENSSHAG00000014358	HELLS	99	81.555	Sarcophilus_harrisii
ENSCATG00000033830	HELLS	99	68.539	ENSSFOG00015017895	hells	98	62.847	Scleropages_formosus
ENSCATG00000033830	HELLS	98	67.857	ENSSMAG00000017423	hells	99	59.883	Scophthalmus_maximus
ENSCATG00000033830	HELLS	99	66.856	ENSSDUG00000016924	hells	99	60.023	Seriola_dumerili
ENSCATG00000033830	HELLS	98	65.379	ENSSLDG00000018960	hells	94	59.627	Seriola_lalandi_dorsalis
ENSCATG00000033830	HELLS	100	79.832	ENSSPUG00000017425	HELLS	100	75.772	Sphenodon_punctatus
ENSCATG00000033830	HELLS	95	68.713	ENSSPAG00000015579	hells	99	66.131	Stegastes_partitus
ENSCATG00000033830	HELLS	100	95.372	ENSSSCG00000010486	HELLS	100	89.581	Sus_scrofa
ENSCATG00000033830	HELLS	99	83.333	ENSTGUG00000007157	HELLS	99	77.126	Taeniopygia_guttata
ENSCATG00000033830	HELLS	99	67.370	ENSTRUG00000000350	hells	97	61.130	Takifugu_rubripes
ENSCATG00000033830	HELLS	98	57.504	ENSTNIG00000003738	hells	98	54.245	Tetraodon_nigroviridis
ENSCATG00000033830	HELLS	100	94.818	ENSUAMG00000003343	HELLS	100	89.401	Ursus_americanus
ENSCATG00000033830	HELLS	100	95.652	ENSUMAG00000004748	HELLS	99	95.051	Ursus_maritimus
ENSCATG00000033830	HELLS	99	93.671	ENSVPAG00000010115	HELLS	100	87.769	Vicugna_pacos
ENSCATG00000033830	HELLS	100	96.213	ENSVVUG00000022808	HELLS	100	89.694	Vulpes_vulpes
ENSCATG00000033830	HELLS	99	65.657	ENSXCOG00000013840	hells	99	57.925	Xiphophorus_couchianus
ENSCATG00000033830	HELLS	99	65.590	ENSXMAG00000005731	hells	97	65.512	Xiphophorus_maculatus