EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000035211 (Gene tree)
Gene ID: 105585848
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 9600 bases
Position: chrKQ012885.1:38980320-38989919
Accession: 105585848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000023304	MBD	PF01429.19	3.8e-21	1	1
ENSCATP00000023300	MBD	PF01429.19	4.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000047515	MBD4-201	2306	XM_012060299	ENSCATP00000023300	572 (aa)	XP_011915689	A0A2K5MDL2
ENSCATT00000047519	MBD4-202	1491	-	ENSCATP00000023304	496 (aa)	-	A0A2K5MDP7

Gene Model

Click here to download ENSCATG00000035211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000035211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000035211	MBD4	100	93.565	ENSG00000129071	MBD4	100	93.565	Homo_sapiens
ENSCATG00000035211	MBD4	99	76.083	ENSAMEG00000004562	MBD4	99	76.083	Ailuropoda_melanoleuca
ENSCATG00000035211	MBD4	52	59.494	ENSAOCG00000001157	mbd4	62	59.494	Amphiprion_ocellaris
ENSCATG00000035211	MBD4	52	66.667	ENSATEG00000014594	MBD4	53	66.667	Anabas_testudineus
ENSCATG00000035211	MBD4	99	70.855	ENSBTAG00000021645	MBD4	100	70.855	Bos_taurus
ENSCATG00000035211	MBD4	100	86.010	ENSCJAG00000017293	MBD4	100	86.010	Callithrix_jacchus
ENSCATG00000035211	MBD4	99	76.215	ENSCAFG00000004867	MBD4	99	76.215	Canis_familiaris
ENSCATG00000035211	MBD4	99	76.215	ENSCAFG00020007082	MBD4	99	76.215	Canis_lupus_dingo
ENSCATG00000035211	MBD4	99	69.634	ENSCHIG00000009760	MBD4	100	69.634	Capra_hircus
ENSCATG00000035211	MBD4	100	87.392	ENSCCAG00000029796	MBD4	100	87.392	Cebus_capucinus
ENSCATG00000035211	MBD4	98	69.542	ENSCLAG00000008974	MBD4	99	69.190	Chinchilla_lanigera
ENSCATG00000035211	MBD4	100	98.252	ENSCSAG00000009037	MBD4	100	98.252	Chlorocebus_sabaeus
ENSCATG00000035211	MBD4	72	84.444	ENSCPBG00000014704	MBD4	89	49.904	Chrysemys_picta_bellii
ENSCATG00000035211	MBD4	100	97.727	ENSCANG00000007120	MBD4	100	97.727	Colobus_angolensis_palliatus
ENSCATG00000035211	MBD4	99	67.483	ENSCGRG00001003507	Mbd4	100	67.483	Cricetulus_griseus_chok1gshd
ENSCATG00000035211	MBD4	99	67.483	ENSCGRG00000010974	Mbd4	100	67.483	Cricetulus_griseus_crigri
ENSCATG00000035211	MBD4	99	76.357	ENSDNOG00000049619	MBD4	100	76.357	Dasypus_novemcinctus
ENSCATG00000035211	MBD4	80	63.169	ENSDORG00000000902	-	95	63.169	Dipodomys_ordii
ENSCATG00000035211	MBD4	54	50.382	ENSEBUG00000010816	mbd4	73	50.382	Eptatretus_burgeri
ENSCATG00000035211	MBD4	99	78.360	ENSEASG00005014800	MBD4	100	78.360	Equus_asinus_asinus
ENSCATG00000035211	MBD4	99	78.360	ENSECAG00000022106	MBD4	100	78.360	Equus_caballus
ENSCATG00000035211	MBD4	95	60.727	ENSEEUG00000011459	MBD4	99	60.727	Erinaceus_europaeus
ENSCATG00000035211	MBD4	99	77.682	ENSFCAG00000000083	MBD4	99	77.682	Felis_catus
ENSCATG00000035211	MBD4	62	79.851	ENSFALG00000013663	MBD4	68	79.851	Ficedula_albicollis
ENSCATG00000035211	MBD4	72	85.185	ENSGAGG00000018644	MBD4	89	50.766	Gopherus_agassizii
ENSCATG00000035211	MBD4	100	91.910	ENSGGOG00000010698	MBD4	100	91.910	Gorilla_gorilla
ENSCATG00000035211	MBD4	98	71.831	ENSHGLG00000009034	MBD4	98	72.711	Heterocephalus_glaber_female
ENSCATG00000035211	MBD4	98	71.831	ENSHGLG00100000135	MBD4	99	71.831	Heterocephalus_glaber_male
ENSCATG00000035211	MBD4	99	72.711	ENSSTOG00000020663	MBD4	100	72.711	Ictidomys_tridecemlineatus
ENSCATG00000035211	MBD4	99	74.697	ENSLAFG00000010609	MBD4	99	74.697	Loxodonta_africana
ENSCATG00000035211	MBD4	100	98.252	ENSMFAG00000002266	MBD4	100	98.252	Macaca_fascicularis
ENSCATG00000035211	MBD4	100	96.813	ENSMMUG00000012723	MBD4	100	96.813	Macaca_mulatta
ENSCATG00000035211	MBD4	96	97.993	ENSMNEG00000029752	MBD4	99	97.993	Macaca_nemestrina
ENSCATG00000035211	MBD4	100	99.476	ENSMLEG00000024859	MBD4	100	99.476	Mandrillus_leucophaeus
ENSCATG00000035211	MBD4	100	80.484	ENSMICG00000008022	MBD4	100	80.484	Microcebus_murinus
ENSCATG00000035211	MBD4	72	51.381	ENSMOCG00000002466	-	97	49.492	Microtus_ochrogaster
ENSCATG00000035211	MBD4	86	59.163	ENSMODG00000006399	-	99	58.765	Monodelphis_domestica
ENSCATG00000035211	MBD4	99	66.434	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.434	Mus_caroli
ENSCATG00000035211	MBD4	99	66.084	ENSMUSG00000030322	Mbd4	100	66.084	Mus_musculus
ENSCATG00000035211	MBD4	99	67.190	MGP_PahariEiJ_G0022511	-	100	67.190	Mus_pahari
ENSCATG00000035211	MBD4	99	65.559	MGP_SPRETEiJ_G0029788	Mbd4	100	65.559	Mus_spretus
ENSCATG00000035211	MBD4	99	75.087	ENSMPUG00000017195	MBD4	99	75.218	Mustela_putorius_furo
ENSCATG00000035211	MBD4	92	79.291	ENSMLUG00000014766	MBD4	97	79.545	Myotis_lucifugus
ENSCATG00000035211	MBD4	100	92.573	ENSNLEG00000005337	MBD4	100	92.573	Nomascus_leucogenys
ENSCATG00000035211	MBD4	99	63.903	ENSOPRG00000000473	MBD4	99	63.903	Ochotona_princeps
ENSCATG00000035211	MBD4	85	40.901	ENSONIG00000017212	mbd4	100	40.713	Oreochromis_niloticus
ENSCATG00000035211	MBD4	72	45.626	ENSOANG00000004589	-	89	47.949	Ornithorhynchus_anatinus
ENSCATG00000035211	MBD4	99	66.667	ENSOCUG00000013006	MBD4	100	66.667	Oryctolagus_cuniculus
ENSCATG00000035211	MBD4	99	76.000	ENSOGAG00000010236	MBD4	100	75.652	Otolemur_garnettii
ENSCATG00000035211	MBD4	99	69.808	ENSOARG00000014699	MBD4	100	69.808	Ovis_aries
ENSCATG00000035211	MBD4	100	93.217	ENSPPAG00000036528	MBD4	100	93.217	Pan_paniscus
ENSCATG00000035211	MBD4	99	77.448	ENSPPRG00000016480	MBD4	99	77.448	Panthera_pardus
ENSCATG00000035211	MBD4	100	92.083	ENSPTRG00000015377	MBD4	100	92.083	Pan_troglodytes
ENSCATG00000035211	MBD4	100	97.410	ENSPANG00000015047	MBD4	100	97.410	Papio_anubis
ENSCATG00000035211	MBD4	66	81.429	ENSPSIG00000007892	MBD4	60	81.429	Pelodiscus_sinensis
ENSCATG00000035211	MBD4	90	61.877	ENSPEMG00000006226	Mbd4	97	61.877	Peromyscus_maniculatus_bairdii
ENSCATG00000035211	MBD4	89	58.397	ENSPCIG00000002276	-	98	58.015	Phascolarctos_cinereus
ENSCATG00000035211	MBD4	100	93.194	ENSPPYG00000013417	MBD4	100	93.194	Pongo_abelii
ENSCATG00000035211	MBD4	95	70.524	ENSPCAG00000012915	MBD4	99	70.524	Procavia_capensis
ENSCATG00000035211	MBD4	99	78.683	ENSPVAG00000005238	MBD4	99	78.336	Pteropus_vampyrus
ENSCATG00000035211	MBD4	99	66.435	ENSRNOG00000010919	Mbd4	100	66.435	Rattus_norvegicus
ENSCATG00000035211	MBD4	100	98.427	ENSRBIG00000027722	MBD4	100	98.427	Rhinopithecus_bieti
ENSCATG00000035211	MBD4	100	98.077	ENSRROG00000029136	MBD4	100	98.077	Rhinopithecus_roxellana
ENSCATG00000035211	MBD4	99	87.326	ENSSBOG00000016810	MBD4	100	86.806	Saimiri_boliviensis_boliviensis
ENSCATG00000035211	MBD4	93	56.007	ENSSHAG00000012953	MBD4	92	56.391	Sarcophilus_harrisii
ENSCATG00000035211	MBD4	53	77.519	ENSSFOG00015016292	mbd4	95	43.676	Scleropages_formosus
ENSCATG00000035211	MBD4	73	91.111	ENSSARG00000004496	-	66	91.111	Sorex_araneus
ENSCATG00000035211	MBD4	86	48.924	ENSSPUG00000017344	MBD4	91	48.924	Sphenodon_punctatus
ENSCATG00000035211	MBD4	99	74.869	ENSSSCG00000033303	MBD4	100	74.869	Sus_scrofa
ENSCATG00000035211	MBD4	85	39.638	ENSTNIG00000017927	mbd4	60	64.398	Tetraodon_nigroviridis
ENSCATG00000035211	MBD4	96	60.550	ENSTBEG00000003041	-	86	60.550	Tupaia_belangeri
ENSCATG00000035211	MBD4	97	76.241	ENSTTRG00000011265	MBD4	100	76.241	Tursiops_truncatus
ENSCATG00000035211	MBD4	86	78.557	ENSUAMG00000000814	MBD4	99	78.557	Ursus_americanus
ENSCATG00000035211	MBD4	99	76.440	ENSUMAG00000017542	MBD4	100	76.440	Ursus_maritimus
ENSCATG00000035211	MBD4	61	95.238	ENSVPAG00000004040	-	55	95.238	Vicugna_pacos
ENSCATG00000035211	MBD4	99	75.563	ENSVVUG00000014222	MBD4	99	75.694	Vulpes_vulpes
ENSCATG00000035211	MBD4	83	41.722	ENSXETG00000026622	mbd4	89	41.722	Xenopus_tropicalis