EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000035214 (Gene tree)
Gene ID: 105598537
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 439522 bases
Position: chrKQ011029.1:26246235-26685756
Accession: 105598537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000023314	TUDOR	PF00567.24	7.5e-28	1	1
ENSCATP00000023306	TUDOR	PF00567.24	7.8e-28	1	1
ENSCATP00000023314	SNase	PF00565.17	1.7e-69	1	5
ENSCATP00000023314	SNase	PF00565.17	1.7e-69	2	5
ENSCATP00000023314	SNase	PF00565.17	1.7e-69	3	5
ENSCATP00000023314	SNase	PF00565.17	1.7e-69	4	5
ENSCATP00000023314	SNase	PF00565.17	1.7e-69	5	5
ENSCATP00000023306	SNase	PF00565.17	2e-69	1	5
ENSCATP00000023306	SNase	PF00565.17	2e-69	2	5
ENSCATP00000023306	SNase	PF00565.17	2e-69	3	5
ENSCATP00000023306	SNase	PF00565.17	2e-69	4	5
ENSCATP00000023306	SNase	PF00565.17	2e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000047521	SND1-201	3604	XM_012087964	ENSCATP00000023306	910 (aa)	XP_011943354	A0A2K5MDL9
ENSCATT00000047530	SND1-202	2664	-	ENSCATP00000023314	887 (aa)	-	A0A2K5MDQ6

Gene Model

Click here to download ENSCATG00000035214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000035214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000035214	SND1	100	99.560	ENSG00000197157	SND1	100	99.560	Homo_sapiens
ENSCATG00000035214	SND1	99	84.989	ENSAPOG00000017599	snd1	99	84.761	Acanthochromis_polyacanthus
ENSCATG00000035214	SND1	100	98.794	ENSAMEG00000004664	SND1	94	98.794	Ailuropoda_melanoleuca
ENSCATG00000035214	SND1	99	82.147	ENSACIG00000003551	snd1	99	82.071	Amphilophus_citrinellus
ENSCATG00000035214	SND1	99	84.763	ENSAOCG00000014166	snd1	99	84.538	Amphiprion_ocellaris
ENSCATG00000035214	SND1	99	84.763	ENSAPEG00000007067	snd1	99	84.538	Amphiprion_percula
ENSCATG00000035214	SND1	98	84.235	ENSATEG00000018475	snd1	88	84.265	Anabas_testudineus
ENSCATG00000035214	SND1	100	99.341	ENSANAG00000034463	SND1	100	99.341	Aotus_nancymaae
ENSCATG00000035214	SND1	99	84.424	ENSACLG00000022897	snd1	99	84.187	Astatotilapia_calliptera
ENSCATG00000035214	SND1	99	85.023	ENSAMXG00000016318	snd1	98	84.967	Astyanax_mexicanus
ENSCATG00000035214	SND1	100	98.901	ENSBTAG00000010692	SND1	100	98.901	Bos_taurus
ENSCATG00000035214	SND1	99	46.837	WBGene00006626	tsn-1	98	47.368	Caenorhabditis_elegans
ENSCATG00000035214	SND1	100	99.121	ENSCJAG00000017668	SND1	100	99.121	Callithrix_jacchus
ENSCATG00000035214	SND1	100	99.231	ENSCAFG00000001700	SND1	100	99.231	Canis_familiaris
ENSCATG00000035214	SND1	100	99.231	ENSCAFG00020021639	SND1	100	99.231	Canis_lupus_dingo
ENSCATG00000035214	SND1	100	99.231	ENSCHIG00000023390	SND1	100	99.231	Capra_hircus
ENSCATG00000035214	SND1	75	99.297	ENSTSYG00000004979	SND1	96	99.472	Carlito_syrichta
ENSCATG00000035214	SND1	99	85.440	ENSCAPG00000010677	SND1	98	84.710	Cavia_aperea
ENSCATG00000035214	SND1	100	98.132	ENSCPOG00000006251	SND1	100	98.132	Cavia_porcellus
ENSCATG00000035214	SND1	100	99.451	ENSCCAG00000036847	SND1	100	99.451	Cebus_capucinus
ENSCATG00000035214	SND1	100	98.242	ENSCLAG00000011796	SND1	100	98.242	Chinchilla_lanigera
ENSCATG00000035214	SND1	100	100.000	ENSCSAG00000010182	SND1	100	100.000	Chlorocebus_sabaeus
ENSCATG00000035214	SND1	79	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSCATG00000035214	SND1	99	93.439	ENSCPBG00000018094	SND1	98	93.386	Chrysemys_picta_bellii
ENSCATG00000035214	SND1	99	56.856	ENSCING00000000524	-	98	57.143	Ciona_intestinalis
ENSCATG00000035214	SND1	99	58.315	ENSCSAVG00000008807	-	99	58.453	Ciona_savignyi
ENSCATG00000035214	SND1	100	100.000	ENSCANG00000035119	SND1	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000035214	SND1	100	97.253	ENSCGRG00001022514	Snd1	100	97.253	Cricetulus_griseus_chok1gshd
ENSCATG00000035214	SND1	99	97.285	ENSCGRG00000012277	Snd1	99	97.285	Cricetulus_griseus_crigri
ENSCATG00000035214	SND1	99	84.650	ENSCSEG00000008661	snd1	98	84.676	Cynoglossus_semilaevis
ENSCATG00000035214	SND1	99	85.327	ENSCVAG00000010316	snd1	100	83.793	Cyprinodon_variegatus
ENSCATG00000035214	SND1	99	85.908	ENSDARG00000006766	snd1	97	87.590	Danio_rerio
ENSCATG00000035214	SND1	99	96.163	ENSDNOG00000006795	SND1	100	96.167	Dasypus_novemcinctus
ENSCATG00000035214	SND1	100	98.791	ENSDORG00000000336	Snd1	100	98.791	Dipodomys_ordii
ENSCATG00000035214	SND1	99	50.714	FBgn0035121	Tudor-SN	98	50.703	Drosophila_melanogaster
ENSCATG00000035214	SND1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSCATG00000035214	SND1	62	67.568	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSCATG00000035214	SND1	100	97.624	ENSEASG00005008513	SND1	100	97.624	Equus_asinus_asinus
ENSCATG00000035214	SND1	100	99.231	ENSECAG00000011451	SND1	100	99.231	Equus_caballus
ENSCATG00000035214	SND1	100	86.923	ENSEEUG00000014737	SND1	100	86.923	Erinaceus_europaeus
ENSCATG00000035214	SND1	99	83.409	ENSELUG00000001805	snd1	95	83.278	Esox_lucius
ENSCATG00000035214	SND1	100	99.231	ENSFCAG00000008289	SND1	100	99.231	Felis_catus
ENSCATG00000035214	SND1	100	98.462	ENSFDAG00000015881	SND1	100	98.462	Fukomys_damarensis
ENSCATG00000035214	SND1	99	83.223	ENSFHEG00000004093	snd1	97	84.983	Fundulus_heteroclitus
ENSCATG00000035214	SND1	64	75.141	ENSGMOG00000018932	snd1	64	75.141	Gadus_morhua
ENSCATG00000035214	SND1	99	85.327	ENSGAFG00000008421	snd1	99	85.327	Gambusia_affinis
ENSCATG00000035214	SND1	100	53.855	ENSGACG00000019793	snd1	98	54.314	Gasterosteus_aculeatus
ENSCATG00000035214	SND1	100	99.780	ENSGGOG00000009614	SND1	100	99.780	Gorilla_gorilla
ENSCATG00000035214	SND1	99	84.424	ENSHBUG00000019135	snd1	99	84.187	Haplochromis_burtoni
ENSCATG00000035214	SND1	100	98.132	ENSHGLG00000003618	SND1	100	98.132	Heterocephalus_glaber_female
ENSCATG00000035214	SND1	99	98.077	ENSHGLG00100012449	SND1	100	97.680	Heterocephalus_glaber_male
ENSCATG00000035214	SND1	99	83.973	ENSHCOG00000005266	snd1	98	84.004	Hippocampus_comes
ENSCATG00000035214	SND1	99	83.784	ENSIPUG00000013279	snd1	98	83.742	Ictalurus_punctatus
ENSCATG00000035214	SND1	100	98.791	ENSSTOG00000002140	SND1	100	98.791	Ictidomys_tridecemlineatus
ENSCATG00000035214	SND1	100	98.901	ENSJJAG00000009561	Snd1	100	98.901	Jaculus_jaculus
ENSCATG00000035214	SND1	99	85.102	ENSKMAG00000016997	snd1	98	85.123	Kryptolebias_marmoratus
ENSCATG00000035214	SND1	99	86.491	ENSLBEG00000013563	snd1	99	83.760	Labrus_bergylta
ENSCATG00000035214	SND1	99	85.794	ENSLOCG00000015537	snd1	98	85.557	Lepisosteus_oculatus
ENSCATG00000035214	SND1	100	98.462	ENSLAFG00000009696	SND1	100	98.462	Loxodonta_africana
ENSCATG00000035214	SND1	100	100.000	ENSMFAG00000038114	SND1	100	100.000	Macaca_fascicularis
ENSCATG00000035214	SND1	100	100.000	ENSMMUG00000015432	SND1	100	100.000	Macaca_mulatta
ENSCATG00000035214	SND1	100	100.000	ENSMNEG00000039808	SND1	100	100.000	Macaca_nemestrina
ENSCATG00000035214	SND1	100	99.890	ENSMLEG00000029040	SND1	100	99.890	Mandrillus_leucophaeus
ENSCATG00000035214	SND1	99	84.650	ENSMAMG00000011739	snd1	98	84.598	Mastacembelus_armatus
ENSCATG00000035214	SND1	99	84.424	ENSMZEG00005005681	snd1	99	84.187	Maylandia_zebra
ENSCATG00000035214	SND1	100	99.341	ENSMICG00000000097	SND1	100	99.341	Microcebus_murinus
ENSCATG00000035214	SND1	100	98.132	ENSMOCG00000005040	Snd1	100	98.132	Microtus_ochrogaster
ENSCATG00000035214	SND1	99	84.537	ENSMMOG00000001795	snd1	99	84.316	Mola_mola
ENSCATG00000035214	SND1	99	96.154	ENSMODG00000015182	SND1	99	95.987	Monodelphis_domestica
ENSCATG00000035214	SND1	100	83.333	ENSMALG00000012071	snd1	98	84.152	Monopterus_albus
ENSCATG00000035214	SND1	100	97.802	MGP_CAROLIEiJ_G0028159	Snd1	100	97.802	Mus_caroli
ENSCATG00000035214	SND1	100	97.582	ENSMUSG00000001424	Snd1	100	97.582	Mus_musculus
ENSCATG00000035214	SND1	100	97.802	MGP_PahariEiJ_G0021917	Snd1	100	98.482	Mus_pahari
ENSCATG00000035214	SND1	100	97.802	MGP_SPRETEiJ_G0029159	Snd1	100	97.802	Mus_spretus
ENSCATG00000035214	SND1	100	98.571	ENSMPUG00000006545	SND1	100	98.571	Mustela_putorius_furo
ENSCATG00000035214	SND1	99	97.318	ENSMLUG00000017130	SND1	99	97.318	Myotis_lucifugus
ENSCATG00000035214	SND1	100	98.132	ENSNGAG00000011186	Snd1	100	98.132	Nannospalax_galili
ENSCATG00000035214	SND1	99	84.312	ENSNBRG00000006681	snd1	99	84.076	Neolamprologus_brichardi
ENSCATG00000035214	SND1	100	99.670	ENSNLEG00000012263	SND1	100	99.774	Nomascus_leucogenys
ENSCATG00000035214	SND1	93	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSCATG00000035214	SND1	100	98.462	ENSODEG00000011502	SND1	100	98.462	Octodon_degus
ENSCATG00000035214	SND1	99	84.312	ENSONIG00000011481	snd1	96	84.076	Oreochromis_niloticus
ENSCATG00000035214	SND1	99	94.582	ENSOANG00000000817	SND1	99	93.868	Ornithorhynchus_anatinus
ENSCATG00000035214	SND1	100	97.582	ENSOCUG00000001620	SND1	100	97.582	Oryctolagus_cuniculus
ENSCATG00000035214	SND1	99	84.086	ENSORLG00000015201	snd1	98	84.022	Oryzias_latipes
ENSCATG00000035214	SND1	99	84.199	ENSORLG00020013991	snd1	98	84.134	Oryzias_latipes_hni
ENSCATG00000035214	SND1	99	84.199	ENSORLG00015012436	snd1	98	84.134	Oryzias_latipes_hsok
ENSCATG00000035214	SND1	99	84.424	ENSOMEG00000006406	snd1	98	84.452	Oryzias_melastigma
ENSCATG00000035214	SND1	100	99.232	ENSOGAG00000013356	SND1	94	99.232	Otolemur_garnettii
ENSCATG00000035214	SND1	99	96.267	ENSOARG00000002149	SND1	100	96.271	Ovis_aries
ENSCATG00000035214	SND1	100	99.670	ENSPPAG00000042947	SND1	100	99.670	Pan_paniscus
ENSCATG00000035214	SND1	100	99.231	ENSPPRG00000004494	SND1	100	99.231	Panthera_pardus
ENSCATG00000035214	SND1	100	99.121	ENSPTIG00000014214	SND1	100	99.121	Panthera_tigris_altaica
ENSCATG00000035214	SND1	100	99.670	ENSPTRG00000023911	SND1	100	99.670	Pan_troglodytes
ENSCATG00000035214	SND1	100	100.000	ENSPANG00000011997	SND1	100	100.000	Papio_anubis
ENSCATG00000035214	SND1	99	81.859	ENSPKIG00000023494	snd1	98	81.909	Paramormyrops_kingsleyae
ENSCATG00000035214	SND1	94	83.234	ENSPMGG00000003629	snd1	100	83.234	Periophthalmus_magnuspinnatus
ENSCATG00000035214	SND1	100	98.022	ENSPEMG00000010240	Snd1	100	98.022	Peromyscus_maniculatus_bairdii
ENSCATG00000035214	SND1	99	73.559	ENSPMAG00000007915	-	99	73.559	Petromyzon_marinus
ENSCATG00000035214	SND1	100	96.484	ENSPCIG00000011561	SND1	100	96.484	Phascolarctos_cinereus
ENSCATG00000035214	SND1	100	83.991	ENSPFOG00000001557	snd1	99	84.872	Poecilia_formosa
ENSCATG00000035214	SND1	100	83.991	ENSPLAG00000018459	snd1	96	84.872	Poecilia_latipinna
ENSCATG00000035214	SND1	99	85.440	ENSPMEG00000006803	snd1	99	85.317	Poecilia_mexicana
ENSCATG00000035214	SND1	99	85.102	ENSPREG00000002189	snd1	99	84.983	Poecilia_reticulata
ENSCATG00000035214	SND1	93	99.628	ENSPPYG00000017972	SND1	100	99.628	Pongo_abelii
ENSCATG00000035214	SND1	100	86.813	ENSPCAG00000011305	SND1	99	86.734	Procavia_capensis
ENSCATG00000035214	SND1	100	99.560	ENSPCOG00000026791	SND1	100	99.560	Propithecus_coquereli
ENSCATG00000035214	SND1	100	97.143	ENSPVAG00000013945	SND1	100	97.143	Pteropus_vampyrus
ENSCATG00000035214	SND1	99	84.424	ENSPNYG00000000932	snd1	99	84.187	Pundamilia_nyererei
ENSCATG00000035214	SND1	99	84.572	ENSPNAG00000001206	snd1	98	84.444	Pygocentrus_nattereri
ENSCATG00000035214	SND1	99	97.624	ENSRNOG00000031173	Snd1	99	97.467	Rattus_norvegicus
ENSCATG00000035214	SND1	75	99.812	ENSRBIG00000027782	-	93	99.810	Rhinopithecus_bieti
ENSCATG00000035214	SND1	100	100.000	ENSRROG00000033020	SND1	100	100.000	Rhinopithecus_roxellana
ENSCATG00000035214	SND1	100	99.341	ENSSBOG00000032461	SND1	100	99.341	Saimiri_boliviensis_boliviensis
ENSCATG00000035214	SND1	99	93.228	ENSSHAG00000015359	SND1	100	93.018	Sarcophilus_harrisii
ENSCATG00000035214	SND1	99	83.557	ENSSFOG00015001103	snd1	98	83.463	Scleropages_formosus
ENSCATG00000035214	SND1	99	83.973	ENSSMAG00000001932	snd1	93	83.742	Scophthalmus_maximus
ENSCATG00000035214	SND1	99	84.763	ENSSDUG00000002699	snd1	92	84.538	Seriola_dumerili
ENSCATG00000035214	SND1	100	76.425	ENSSLDG00000001950	snd1	98	77.197	Seriola_lalandi_dorsalis
ENSCATG00000035214	SND1	88	96.226	ENSSARG00000004877	SND1	92	96.226	Sorex_araneus
ENSCATG00000035214	SND1	75	87.522	ENSSPUG00000017586	SND1	96	87.826	Sphenodon_punctatus
ENSCATG00000035214	SND1	75	86.903	ENSSPAG00000021398	snd1	96	86.911	Stegastes_partitus
ENSCATG00000035214	SND1	100	98.901	ENSSSCG00000016590	SND1	100	98.901	Sus_scrofa
ENSCATG00000035214	SND1	99	85.098	ENSTRUG00000014067	snd1	98	83.893	Takifugu_rubripes
ENSCATG00000035214	SND1	100	83.443	ENSTNIG00000011019	snd1	98	84.452	Tetraodon_nigroviridis
ENSCATG00000035214	SND1	96	93.160	ENSTBEG00000003999	SND1	100	93.160	Tupaia_belangeri
ENSCATG00000035214	SND1	100	94.286	ENSTTRG00000006059	SND1	100	94.286	Tursiops_truncatus
ENSCATG00000035214	SND1	93	98.859	ENSUAMG00000005604	-	93	98.859	Ursus_americanus
ENSCATG00000035214	SND1	71	90.390	ENSUAMG00000002820	-	86	90.323	Ursus_americanus
ENSCATG00000035214	SND1	100	99.011	ENSUMAG00000005960	SND1	100	99.011	Ursus_maritimus
ENSCATG00000035214	SND1	79	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSCATG00000035214	SND1	100	99.011	ENSVVUG00000007226	SND1	100	99.011	Vulpes_vulpes
ENSCATG00000035214	SND1	99	84.746	ENSXETG00000023043	snd1	100	84.668	Xenopus_tropicalis
ENSCATG00000035214	SND1	95	81.591	ENSXCOG00000013629	snd1	99	81.591	Xiphophorus_couchianus
ENSCATG00000035214	SND1	99	85.327	ENSXMAG00000011469	snd1	99	85.206	Xiphophorus_maculatus