EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000036006 (Gene tree)
Gene ID: 105592369
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 12515 bases
Position: chrKQ010227.1:2224690-2237204
Accession: 105592369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000025039	FDF	PF09532.10	3.5e-25	1	1
ENSCATP00000025035	FDF	PF09532.10	4.2e-25	1	1
ENSCATP00000025039	SM-ATX	PF14438.6	9.3e-08	1	1
ENSCATP00000025035	SM-ATX	PF14438.6	9.4e-08	1	1
ENSCATP00000025039	LSM14	PF12701.7	1.2e-30	1	1
ENSCATP00000025035	LSM14	PF12701.7	1.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000049263	LSM14B-201	2330	XM_012074318	ENSCATP00000025035	424 (aa)	XP_011929708	A0A2K5MIK4
ENSCATT00000049267	LSM14B-202	2213	XM_012074321	ENSCATP00000025039	385 (aa)	XP_011929711	A0A2K5MIV1

Gene Model

Click here to download ENSCATG00000036006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000036006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000036006	LSM14B	91	45.431	ENSCATG00000021731	LSM14A	83	43.382

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000036006	LSM14B	100	99.221	ENSG00000149657	LSM14B	100	99.221	Homo_sapiens
ENSCATG00000036006	LSM14B	90	55.769	ENSAPOG00000001780	lsm14b	92	56.098	Acanthochromis_polyacanthus
ENSCATG00000036006	LSM14B	99	92.908	ENSAMEG00000013430	LSM14B	100	92.908	Ailuropoda_melanoleuca
ENSCATG00000036006	LSM14B	62	41.494	ENSACIG00000003147	LSM14B	88	41.597	Amphilophus_citrinellus
ENSCATG00000036006	LSM14B	90	52.542	ENSACIG00000012266	lsm14b	91	52.055	Amphilophus_citrinellus
ENSCATG00000036006	LSM14B	90	56.354	ENSAOCG00000012380	lsm14b	92	56.676	Amphiprion_ocellaris
ENSCATG00000036006	LSM14B	98	48.843	ENSAOCG00000006667	LSM14B	90	49.860	Amphiprion_ocellaris
ENSCATG00000036006	LSM14B	90	53.143	ENSAPEG00000023633	lsm14b	92	50.136	Amphiprion_percula
ENSCATG00000036006	LSM14B	90	53.352	ENSATEG00000016603	lsm14b	92	53.719	Anabas_testudineus
ENSCATG00000036006	LSM14B	71	39.542	ENSATEG00000015895	LSM14B	89	41.156	Anabas_testudineus
ENSCATG00000036006	LSM14B	92	83.418	ENSAPLG00000013203	LSM14B	100	83.418	Anas_platyrhynchos
ENSCATG00000036006	LSM14B	99	81.039	ENSACAG00000016195	LSM14B	99	81.039	Anolis_carolinensis
ENSCATG00000036006	LSM14B	100	96.934	ENSANAG00000037915	LSM14B	100	96.934	Aotus_nancymaae
ENSCATG00000036006	LSM14B	89	50.681	ENSACLG00000019663	lsm14b	91	54.696	Astatotilapia_calliptera
ENSCATG00000036006	LSM14B	99	60.934	ENSAMXG00000002865	lsm14b	99	61.654	Astyanax_mexicanus
ENSCATG00000036006	LSM14B	100	91.981	ENSBTAG00000021558	LSM14B	100	91.981	Bos_taurus
ENSCATG00000036006	LSM14B	100	97.170	ENSCJAG00000014434	LSM14B	100	97.170	Callithrix_jacchus
ENSCATG00000036006	LSM14B	91	92.448	ENSCAFG00000012518	LSM14B	98	92.448	Canis_familiaris
ENSCATG00000036006	LSM14B	100	93.766	ENSCAFG00020022150	LSM14B	100	93.766	Canis_lupus_dingo
ENSCATG00000036006	LSM14B	99	68.947	ENSCHIG00000022681	-	100	68.947	Capra_hircus
ENSCATG00000036006	LSM14B	100	93.506	ENSCHIG00000010284	-	100	93.506	Capra_hircus
ENSCATG00000036006	LSM14B	89	95.029	ENSTSYG00000031914	LSM14B	89	95.029	Carlito_syrichta
ENSCATG00000036006	LSM14B	89	95.044	ENSCAPG00000013059	LSM14B	100	95.044	Cavia_aperea
ENSCATG00000036006	LSM14B	89	95.322	ENSCPOG00000038080	LSM14B	100	95.322	Cavia_porcellus
ENSCATG00000036006	LSM14B	100	71.934	ENSCCAG00000024900	-	100	79.355	Cebus_capucinus
ENSCATG00000036006	LSM14B	100	97.143	ENSCCAG00000021267	LSM14B	100	97.143	Cebus_capucinus
ENSCATG00000036006	LSM14B	89	94.444	ENSCLAG00000003186	LSM14B	100	94.444	Chinchilla_lanigera
ENSCATG00000036006	LSM14B	100	99.292	ENSCSAG00000015729	LSM14B	100	99.292	Chlorocebus_sabaeus
ENSCATG00000036006	LSM14B	71	62.252	ENSCHOG00000006997	-	100	62.914	Choloepus_hoffmanni
ENSCATG00000036006	LSM14B	99	84.834	ENSCPBG00000027065	LSM14B	99	84.834	Chrysemys_picta_bellii
ENSCATG00000036006	LSM14B	89	98.538	ENSCANG00000036986	LSM14B	100	98.538	Colobus_angolensis_palliatus
ENSCATG00000036006	LSM14B	100	95.325	ENSCGRG00001018399	Lsm14b	100	95.325	Cricetulus_griseus_chok1gshd
ENSCATG00000036006	LSM14B	70	92.953	ENSCGRG00000006111	-	100	92.953	Cricetulus_griseus_crigri
ENSCATG00000036006	LSM14B	63	84.362	ENSCGRG00000002484	-	100	82.716	Cricetulus_griseus_crigri
ENSCATG00000036006	LSM14B	95	47.436	ENSCSEG00000020669	LSM14B	92	47.326	Cynoglossus_semilaevis
ENSCATG00000036006	LSM14B	91	52.632	ENSCSEG00000004722	lsm14b	93	52.732	Cynoglossus_semilaevis
ENSCATG00000036006	LSM14B	65	37.647	ENSCVAG00000012433	-	88	36.820	Cyprinodon_variegatus
ENSCATG00000036006	LSM14B	99	55.128	ENSDARG00000025386	lsm14b	99	54.937	Danio_rerio
ENSCATG00000036006	LSM14B	72	88.197	ENSDNOG00000025246	LSM14B	100	88.197	Dasypus_novemcinctus
ENSCATG00000036006	LSM14B	90	91.594	ENSDORG00000016683	Lsm14b	100	89.836	Dipodomys_ordii
ENSCATG00000036006	LSM14B	99	75.065	ENSETEG00000001869	-	100	73.766	Echinops_telfairi
ENSCATG00000036006	LSM14B	57	85.520	ENSETEG00000011188	-	100	85.281	Echinops_telfairi
ENSCATG00000036006	LSM14B	72	92.131	ENSEASG00005023218	LSM14B	100	92.131	Equus_asinus_asinus
ENSCATG00000036006	LSM14B	100	94.545	ENSECAG00000010659	LSM14B	100	94.545	Equus_caballus
ENSCATG00000036006	LSM14B	74	74.386	ENSEEUG00000007331	LSM14B	100	74.386	Erinaceus_europaeus
ENSCATG00000036006	LSM14B	96	59.151	ENSELUG00000005780	lsm14b	92	60.894	Esox_lucius
ENSCATG00000036006	LSM14B	100	53.299	ENSELUG00000016299	LSM14B	99	53.197	Esox_lucius
ENSCATG00000036006	LSM14B	100	94.026	ENSFCAG00000003248	LSM14B	100	94.026	Felis_catus
ENSCATG00000036006	LSM14B	91	85.013	ENSFALG00000010618	LSM14B	100	85.013	Ficedula_albicollis
ENSCATG00000036006	LSM14B	89	94.737	ENSFDAG00000002214	LSM14B	100	94.737	Fukomys_damarensis
ENSCATG00000036006	LSM14B	100	48.768	ENSFHEG00000006237	lsm14b	100	50.000	Fundulus_heteroclitus
ENSCATG00000036006	LSM14B	74	41.379	ENSFHEG00000003362	LSM14B	81	42.042	Fundulus_heteroclitus
ENSCATG00000036006	LSM14B	100	51.938	ENSGMOG00000017115	lsm14b	99	45.775	Gadus_morhua
ENSCATG00000036006	LSM14B	99	84.778	ENSGALG00000005125	LSM14B	99	85.714	Gallus_gallus
ENSCATG00000036006	LSM14B	69	69.231	ENSGAFG00000020318	lsm14b	74	69.231	Gambusia_affinis
ENSCATG00000036006	LSM14B	66	41.176	ENSGAFG00000013723	LSM14B	87	38.034	Gambusia_affinis
ENSCATG00000036006	LSM14B	91	55.367	ENSGACG00000009973	lsm14b	92	55.367	Gasterosteus_aculeatus
ENSCATG00000036006	LSM14B	63	80.408	ENSGAGG00000004106	LSM14B	94	80.408	Gopherus_agassizii
ENSCATG00000036006	LSM14B	90	97.701	ENSGGOG00000005630	LSM14B	100	99.016	Gorilla_gorilla
ENSCATG00000036006	LSM14B	100	95.065	ENSHGLG00000015055	LSM14B	100	95.065	Heterocephalus_glaber_female
ENSCATG00000036006	LSM14B	89	92.690	ENSHGLG00100015273	LSM14B	100	93.046	Heterocephalus_glaber_male
ENSCATG00000036006	LSM14B	95	49.610	ENSHCOG00000018747	LSM14B	92	49.864	Hippocampus_comes
ENSCATG00000036006	LSM14B	59	43.913	ENSHCOG00000004867	lsm14b	86	44.681	Hippocampus_comes
ENSCATG00000036006	LSM14B	90	62.040	ENSIPUG00000014946	lsm14b	87	62.291	Ictalurus_punctatus
ENSCATG00000036006	LSM14B	89	96.491	ENSSTOG00000020482	LSM14B	100	96.491	Ictidomys_tridecemlineatus
ENSCATG00000036006	LSM14B	99	94.211	ENSJJAG00000012728	Lsm14b	99	94.211	Jaculus_jaculus
ENSCATG00000036006	LSM14B	90	51.934	ENSKMAG00000017524	lsm14b	93	52.316	Kryptolebias_marmoratus
ENSCATG00000036006	LSM14B	52	41.905	ENSKMAG00000012834	-	88	42.105	Kryptolebias_marmoratus
ENSCATG00000036006	LSM14B	69	36.466	ENSLBEG00000007951	LSM14B	86	38.889	Labrus_bergylta
ENSCATG00000036006	LSM14B	99	70.588	ENSLACG00000003849	LSM14B	99	70.824	Latimeria_chalumnae
ENSCATG00000036006	LSM14B	99	62.564	ENSLOCG00000003746	lsm14b	99	62.564	Lepisosteus_oculatus
ENSCATG00000036006	LSM14B	90	89.306	ENSLAFG00000007492	LSM14B	100	89.306	Loxodonta_africana
ENSCATG00000036006	LSM14B	100	99.528	ENSMFAG00000041479	LSM14B	100	99.528	Macaca_fascicularis
ENSCATG00000036006	LSM14B	100	99.481	ENSMMUG00000014084	LSM14B	100	99.481	Macaca_mulatta
ENSCATG00000036006	LSM14B	100	99.481	ENSMNEG00000045573	LSM14B	100	99.481	Macaca_nemestrina
ENSCATG00000036006	LSM14B	89	100.000	ENSMLEG00000040895	LSM14B	100	100.000	Mandrillus_leucophaeus
ENSCATG00000036006	LSM14B	99	48.718	ENSMAMG00000024124	LSM14B	91	49.721	Mastacembelus_armatus
ENSCATG00000036006	LSM14B	90	53.425	ENSMAMG00000020539	lsm14b	92	54.595	Mastacembelus_armatus
ENSCATG00000036006	LSM14B	89	50.409	ENSMZEG00005000987	lsm14b	91	54.420	Maylandia_zebra
ENSCATG00000036006	LSM14B	91	47.340	ENSMZEG00005026001	LSM14B	94	45.789	Maylandia_zebra
ENSCATG00000036006	LSM14B	91	80.056	ENSMGAG00000005300	LSM14B	100	81.180	Meleagris_gallopavo
ENSCATG00000036006	LSM14B	100	94.286	ENSMAUG00000020700	Lsm14b	100	94.286	Mesocricetus_auratus
ENSCATG00000036006	LSM14B	100	96.462	ENSMICG00000014675	LSM14B	100	96.462	Microcebus_murinus
ENSCATG00000036006	LSM14B	65	77.818	ENSMOCG00000005119	-	93	77.656	Microtus_ochrogaster
ENSCATG00000036006	LSM14B	100	94.805	ENSMOCG00000020600	Lsm14b	100	94.805	Microtus_ochrogaster
ENSCATG00000036006	LSM14B	91	50.142	ENSMMOG00000017321	LSM14B	91	50.142	Mola_mola
ENSCATG00000036006	LSM14B	90	54.494	ENSMMOG00000020042	lsm14b	95	54.696	Mola_mola
ENSCATG00000036006	LSM14B	72	86.557	ENSMODG00000016690	LSM14B	100	86.557	Monodelphis_domestica
ENSCATG00000036006	LSM14B	92	48.634	ENSMALG00000022251	LSM14B	92	45.238	Monopterus_albus
ENSCATG00000036006	LSM14B	94	53.022	ENSMALG00000004783	lsm14b	92	52.422	Monopterus_albus
ENSCATG00000036006	LSM14B	100	94.026	MGP_CAROLIEiJ_G0024770	Lsm14b	100	94.026	Mus_caroli
ENSCATG00000036006	LSM14B	100	94.286	ENSMUSG00000039108	Lsm14b	100	94.286	Mus_musculus
ENSCATG00000036006	LSM14B	100	94.286	MGP_PahariEiJ_G0026214	Lsm14b	100	94.286	Mus_pahari
ENSCATG00000036006	LSM14B	100	94.286	MGP_SPRETEiJ_G0025693	Lsm14b	100	94.286	Mus_spretus
ENSCATG00000036006	LSM14B	95	88.089	ENSMPUG00000007584	LSM14B	100	88.089	Mustela_putorius_furo
ENSCATG00000036006	LSM14B	100	92.746	ENSMLUG00000000304	LSM14B	100	92.746	Myotis_lucifugus
ENSCATG00000036006	LSM14B	60	90.909	ENSNGAG00000016550	Lsm14b	100	90.909	Nannospalax_galili
ENSCATG00000036006	LSM14B	89	98.538	ENSNLEG00000015757	LSM14B	100	98.538	Nomascus_leucogenys
ENSCATG00000036006	LSM14B	77	96.479	ENSMEUG00000008267	-	77	96.575	Notamacropus_eugenii
ENSCATG00000036006	LSM14B	50	95.000	ENSOPRG00000000447	-	59	95.000	Ochotona_princeps
ENSCATG00000036006	LSM14B	100	96.104	ENSODEG00000004099	LSM14B	100	96.104	Octodon_degus
ENSCATG00000036006	LSM14B	89	53.333	ENSONIG00000020318	lsm14b	91	56.712	Oreochromis_niloticus
ENSCATG00000036006	LSM14B	72	82.951	ENSOANG00000003370	LSM14B	99	82.951	Ornithorhynchus_anatinus
ENSCATG00000036006	LSM14B	89	90.407	ENSOCUG00000006279	LSM14B	100	90.407	Oryctolagus_cuniculus
ENSCATG00000036006	LSM14B	90	50.689	ENSORLG00000013525	lsm14b	92	52.717	Oryzias_latipes
ENSCATG00000036006	LSM14B	92	46.113	ENSORLG00000028353	LSM14B	91	45.604	Oryzias_latipes
ENSCATG00000036006	LSM14B	90	50.689	ENSORLG00020020553	lsm14b	92	52.717	Oryzias_latipes_hni
ENSCATG00000036006	LSM14B	64	32.246	ENSORLG00020018191	-	83	35.039	Oryzias_latipes_hni
ENSCATG00000036006	LSM14B	92	46.361	ENSORLG00015013157	LSM14B	91	45.604	Oryzias_latipes_hsok
ENSCATG00000036006	LSM14B	90	50.689	ENSORLG00015016862	lsm14b	92	52.717	Oryzias_latipes_hsok
ENSCATG00000036006	LSM14B	90	49.864	ENSOMEG00000023917	lsm14b	92	52.419	Oryzias_melastigma
ENSCATG00000036006	LSM14B	100	95.755	ENSOGAG00000003915	LSM14B	100	95.755	Otolemur_garnettii
ENSCATG00000036006	LSM14B	92	91.003	ENSOARG00000014706	LSM14B	98	92.408	Ovis_aries
ENSCATG00000036006	LSM14B	90	97.701	ENSPPAG00000035799	LSM14B	95	97.701	Pan_paniscus
ENSCATG00000036006	LSM14B	100	93.766	ENSPPRG00000009197	LSM14B	100	93.766	Panthera_pardus
ENSCATG00000036006	LSM14B	70	91.216	ENSPTIG00000021518	LSM14B	100	91.216	Panthera_tigris_altaica
ENSCATG00000036006	LSM14B	100	99.221	ENSPTRG00000013696	LSM14B	100	99.221	Pan_troglodytes
ENSCATG00000036006	LSM14B	100	99.740	ENSPANG00000011747	LSM14B	100	99.740	Papio_anubis
ENSCATG00000036006	LSM14B	99	61.358	ENSPKIG00000003275	lsm14b	94	84.158	Paramormyrops_kingsleyae
ENSCATG00000036006	LSM14B	90	83.237	ENSPSIG00000014762	LSM14B	100	83.237	Pelodiscus_sinensis
ENSCATG00000036006	LSM14B	99	95.276	ENSPEMG00000017688	Lsm14b	100	95.276	Peromyscus_maniculatus_bairdii
ENSCATG00000036006	LSM14B	100	89.870	ENSPCIG00000013405	LSM14B	100	89.870	Phascolarctos_cinereus
ENSCATG00000036006	LSM14B	100	51.385	ENSPFOG00000005631	lsm14b	92	51.781	Poecilia_formosa
ENSCATG00000036006	LSM14B	100	51.392	ENSPLAG00000002449	lsm14b	92	51.791	Poecilia_latipinna
ENSCATG00000036006	LSM14B	90	47.191	ENSPLAG00000005793	LSM14B	91	47.368	Poecilia_latipinna
ENSCATG00000036006	LSM14B	89	46.089	ENSPMEG00000022953	LSM14B	91	46.849	Poecilia_mexicana
ENSCATG00000036006	LSM14B	100	51.134	ENSPMEG00000000745	lsm14b	92	51.507	Poecilia_mexicana
ENSCATG00000036006	LSM14B	65	37.906	ENSPREG00000007828	LSM14B	87	38.889	Poecilia_reticulata
ENSCATG00000036006	LSM14B	100	79.009	ENSPPYG00000011194	LSM14B	100	80.189	Pongo_abelii
ENSCATG00000036006	LSM14B	100	96.623	ENSPCOG00000013625	LSM14B	100	96.623	Propithecus_coquereli
ENSCATG00000036006	LSM14B	82	72.622	ENSPVAG00000017918	LSM14B	100	70.317	Pteropus_vampyrus
ENSCATG00000036006	LSM14B	99	61.381	ENSPNAG00000012777	lsm14b	99	61.381	Pygocentrus_nattereri
ENSCATG00000036006	LSM14B	100	93.632	ENSRNOG00000054557	Lsm14b	100	93.632	Rattus_norvegicus
ENSCATG00000036006	LSM14B	90	98.429	ENSRBIG00000033461	LSM14B	99	98.429	Rhinopithecus_bieti
ENSCATG00000036006	LSM14B	91	98.854	ENSRROG00000042949	LSM14B	100	98.689	Rhinopithecus_roxellana
ENSCATG00000036006	LSM14B	89	96.491	ENSSBOG00000032820	LSM14B	100	96.491	Saimiri_boliviensis_boliviensis
ENSCATG00000036006	LSM14B	90	88.406	ENSSHAG00000015528	LSM14B	100	86.230	Sarcophilus_harrisii
ENSCATG00000036006	LSM14B	90	60.504	ENSSFOG00015004627	lsm14b	92	61.983	Scleropages_formosus
ENSCATG00000036006	LSM14B	90	53.994	ENSSMAG00000012725	lsm14b	92	54.054	Scophthalmus_maximus
ENSCATG00000036006	LSM14B	97	51.562	ENSSMAG00000000135	LSM14B	92	52.055	Scophthalmus_maximus
ENSCATG00000036006	LSM14B	90	54.595	ENSSDUG00000020977	lsm14b	92	56.000	Seriola_dumerili
ENSCATG00000036006	LSM14B	92	53.151	ENSSDUG00000022770	LSM14B	92	52.747	Seriola_dumerili
ENSCATG00000036006	LSM14B	62	41.445	ENSSLDG00000011354	-	89	44.231	Seriola_lalandi_dorsalis
ENSCATG00000036006	LSM14B	53	83.575	ENSSARG00000007749	-	100	83.575	Sorex_araneus
ENSCATG00000036006	LSM14B	99	84.434	ENSSPUG00000014360	LSM14B	99	84.434	Sphenodon_punctatus
ENSCATG00000036006	LSM14B	65	39.544	ENSSPAG00000018854	-	88	38.462	Stegastes_partitus
ENSCATG00000036006	LSM14B	90	55.714	ENSSPAG00000020915	lsm14b	92	55.182	Stegastes_partitus
ENSCATG00000036006	LSM14B	100	92.925	ENSSSCG00000026052	LSM14B	100	91.148	Sus_scrofa
ENSCATG00000036006	LSM14B	90	84.195	ENSTGUG00000007884	LSM14B	100	84.195	Taeniopygia_guttata
ENSCATG00000036006	LSM14B	100	52.120	ENSTRUG00000011354	lsm14b	100	46.818	Takifugu_rubripes
ENSCATG00000036006	LSM14B	92	51.622	ENSTRUG00000001529	LSM14B	92	51.499	Takifugu_rubripes
ENSCATG00000036006	LSM14B	92	54.645	ENSTNIG00000002445	lsm14b	92	54.645	Tetraodon_nigroviridis
ENSCATG00000036006	LSM14B	98	87.981	ENSUAMG00000025298	LSM14B	99	87.981	Ursus_americanus
ENSCATG00000036006	LSM14B	98	87.981	ENSUMAG00000000480	LSM14B	99	87.981	Ursus_maritimus
ENSCATG00000036006	LSM14B	90	92.174	ENSVVUG00000015920	LSM14B	100	91.148	Vulpes_vulpes
ENSCATG00000036006	LSM14B	86	74.114	ENSXETG00000001997	lsm14b	99	76.758	Xenopus_tropicalis
ENSCATG00000036006	LSM14B	90	48.901	ENSXMAG00000010013	lsm14b	92	49.322	Xiphophorus_maculatus