EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000036320 (Gene tree)
Gene ID: 105596099
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 39965 bases
Position: chrKQ010663.1:3417291-3457255
Accession: 105596099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000025737	YTH	PF04146.15	1e-39	1	1
ENSCATP00000025732	YTH	PF04146.15	1.6e-39	1	1
ENSCATP00000025731	YTH	PF04146.15	1.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000049964	YTHDC1-202	3284	XM_012082746	ENSCATP00000025732	710 (aa)	XP_011938136	A0A2K5MKJ8
ENSCATT00000049963	YTHDC1-201	3362	XM_012082744	ENSCATP00000025731	736 (aa)	XP_011938134	A0A2K5MKH9
ENSCATT00000049969	YTHDC1-203	1611	-	ENSCATP00000025737	536 (aa)	-	A0A2K5MKK2

Gene Model

Click here to download ENSCATG00000036320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000036320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000036320	YTHDC1	100	99.592	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSCATG00000036320	YTHDC1	57	59.338	ENSAPOG00000013997	ythdc1	57	62.500	Acanthochromis_polyacanthus
ENSCATG00000036320	YTHDC1	100	96.482	ENSAMEG00000005688	YTHDC1	100	96.482	Ailuropoda_melanoleuca
ENSCATG00000036320	YTHDC1	64	69.531	ENSACIG00000019728	ythdc1	80	59.649	Amphilophus_citrinellus
ENSCATG00000036320	YTHDC1	56	61.928	ENSAOCG00000000239	ythdc1	59	67.703	Amphiprion_ocellaris
ENSCATG00000036320	YTHDC1	50	64.420	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSCATG00000036320	YTHDC1	97	82.692	ENSAPLG00000009921	YTHDC1	72	84.615	Anas_platyrhynchos
ENSCATG00000036320	YTHDC1	97	81.609	ENSACAG00000009697	YTHDC1	93	82.577	Anolis_carolinensis
ENSCATG00000036320	YTHDC1	100	99.155	ENSANAG00000001522	YTHDC1	100	99.155	Aotus_nancymaae
ENSCATG00000036320	YTHDC1	93	53.606	ENSACLG00000019371	ythdc1	59	66.268	Astatotilapia_calliptera
ENSCATG00000036320	YTHDC1	97	62.030	ENSAMXG00000006978	ythdc1	92	65.875	Astyanax_mexicanus
ENSCATG00000036320	YTHDC1	100	96.336	ENSBTAG00000015572	YTHDC1	100	96.336	Bos_taurus
ENSCATG00000036320	YTHDC1	100	99.577	ENSCJAG00000009934	YTHDC1	100	99.577	Callithrix_jacchus
ENSCATG00000036320	YTHDC1	100	96.482	ENSCAFG00000002821	YTHDC1	100	96.482	Canis_familiaris
ENSCATG00000036320	YTHDC1	100	96.482	ENSCAFG00020027112	YTHDC1	100	96.482	Canis_lupus_dingo
ENSCATG00000036320	YTHDC1	100	96.082	ENSCHIG00000004810	YTHDC1	98	96.082	Capra_hircus
ENSCATG00000036320	YTHDC1	100	98.873	ENSTSYG00000011668	YTHDC1	100	98.873	Carlito_syrichta
ENSCATG00000036320	YTHDC1	99	72.233	ENSCAPG00000008722	YTHDC1	90	69.243	Cavia_aperea
ENSCATG00000036320	YTHDC1	97	96.571	ENSCPOG00000010929	YTHDC1	100	90.845	Cavia_porcellus
ENSCATG00000036320	YTHDC1	100	99.296	ENSCCAG00000035754	YTHDC1	100	99.296	Cebus_capucinus
ENSCATG00000036320	YTHDC1	99	97.796	ENSCLAG00000005482	YTHDC1	99	97.796	Chinchilla_lanigera
ENSCATG00000036320	YTHDC1	100	98.641	ENSCSAG00000005252	YTHDC1	100	98.641	Chlorocebus_sabaeus
ENSCATG00000036320	YTHDC1	97	85.413	ENSCPBG00000021965	YTHDC1	94	86.149	Chrysemys_picta_bellii
ENSCATG00000036320	YTHDC1	100	99.859	ENSCANG00000004769	YTHDC1	100	99.859	Colobus_angolensis_palliatus
ENSCATG00000036320	YTHDC1	100	97.283	ENSCGRG00001000816	Ythdc1	100	97.283	Cricetulus_griseus_chok1gshd
ENSCATG00000036320	YTHDC1	99	97.290	ENSCGRG00000009807	Ythdc1	99	97.290	Cricetulus_griseus_crigri
ENSCATG00000036320	YTHDC1	56	60.739	ENSCSEG00000020404	ythdc1	59	66.906	Cynoglossus_semilaevis
ENSCATG00000036320	YTHDC1	51	67.518	ENSCVAG00000022349	ythdc1	59	65.783	Cyprinodon_variegatus
ENSCATG00000036320	YTHDC1	97	59.924	ENSDARG00000051953	ythdc1	58	78.378	Danio_rerio
ENSCATG00000036320	YTHDC1	100	95.658	ENSDNOG00000004949	YTHDC1	100	95.658	Dasypus_novemcinctus
ENSCATG00000036320	YTHDC1	99	98.624	ENSDORG00000013045	Ythdc1	100	98.573	Dipodomys_ordii
ENSCATG00000036320	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	78	100.000	Echinops_telfairi
ENSCATG00000036320	YTHDC1	100	97.023	ENSEASG00005018383	YTHDC1	100	97.023	Equus_asinus_asinus
ENSCATG00000036320	YTHDC1	100	96.617	ENSECAG00000018303	YTHDC1	100	97.583	Equus_caballus
ENSCATG00000036320	YTHDC1	100	95.658	ENSEEUG00000015466	YTHDC1	100	95.658	Erinaceus_europaeus
ENSCATG00000036320	YTHDC1	96	60.646	ENSELUG00000014029	ythdc1	57	77.179	Esox_lucius
ENSCATG00000036320	YTHDC1	100	97.331	ENSFCAG00000026791	YTHDC1	100	97.331	Felis_catus
ENSCATG00000036320	YTHDC1	68	88.063	ENSFALG00000006581	YTHDC1	87	92.124	Ficedula_albicollis
ENSCATG00000036320	YTHDC1	99	97.714	ENSFDAG00000018560	YTHDC1	100	97.714	Fukomys_damarensis
ENSCATG00000036320	YTHDC1	64	67.925	ENSFHEG00000001286	ythdc1	60	55.449	Fundulus_heteroclitus
ENSCATG00000036320	YTHDC1	63	64.184	ENSGMOG00000018815	ythdc1	78	64.184	Gadus_morhua
ENSCATG00000036320	YTHDC1	99	84.515	ENSGALG00000035906	YTHDC1	90	84.701	Gallus_gallus
ENSCATG00000036320	YTHDC1	70	65.052	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSCATG00000036320	YTHDC1	57	62.326	ENSGACG00000015486	ythdc1	57	63.017	Gasterosteus_aculeatus
ENSCATG00000036320	YTHDC1	97	85.385	ENSGAGG00000007108	YTHDC1	93	86.530	Gopherus_agassizii
ENSCATG00000036320	YTHDC1	100	99.728	ENSGGOG00000021958	YTHDC1	100	99.728	Gorilla_gorilla
ENSCATG00000036320	YTHDC1	93	53.801	ENSHBUG00000019288	ythdc1	59	66.268	Haplochromis_burtoni
ENSCATG00000036320	YTHDC1	100	97.418	ENSHGLG00000006319	-	100	97.418	Heterocephalus_glaber_female
ENSCATG00000036320	YTHDC1	97	72.062	ENSHGLG00000003239	-	68	73.603	Heterocephalus_glaber_female
ENSCATG00000036320	YTHDC1	100	96.359	ENSHGLG00100001556	-	100	96.699	Heterocephalus_glaber_male
ENSCATG00000036320	YTHDC1	97	70.115	ENSHGLG00100008060	-	68	71.648	Heterocephalus_glaber_male
ENSCATG00000036320	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSCATG00000036320	YTHDC1	97	64.190	ENSIPUG00000018136	ythdc1	61	82.232	Ictalurus_punctatus
ENSCATG00000036320	YTHDC1	100	99.049	ENSSTOG00000013652	YTHDC1	100	99.049	Ictidomys_tridecemlineatus
ENSCATG00000036320	YTHDC1	97	93.462	ENSJJAG00000010268	Ythdc1	93	93.314	Jaculus_jaculus
ENSCATG00000036320	YTHDC1	56	60.476	ENSKMAG00000006483	ythdc1	85	65.476	Kryptolebias_marmoratus
ENSCATG00000036320	YTHDC1	54	74.286	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSCATG00000036320	YTHDC1	91	71.053	ENSLACG00000004893	YTHDC1	92	72.994	Latimeria_chalumnae
ENSCATG00000036320	YTHDC1	93	73.431	ENSLOCG00000003045	ythdc1	92	87.028	Lepisosteus_oculatus
ENSCATG00000036320	YTHDC1	100	96.875	ENSLAFG00000021592	YTHDC1	100	96.875	Loxodonta_africana
ENSCATG00000036320	YTHDC1	100	99.864	ENSMFAG00000031927	YTHDC1	100	99.864	Macaca_fascicularis
ENSCATG00000036320	YTHDC1	99	99.863	ENSMMUG00000002265	YTHDC1	100	99.863	Macaca_mulatta
ENSCATG00000036320	YTHDC1	100	99.859	ENSMNEG00000033751	YTHDC1	100	99.859	Macaca_nemestrina
ENSCATG00000036320	YTHDC1	100	100.000	ENSMLEG00000042147	YTHDC1	100	100.000	Mandrillus_leucophaeus
ENSCATG00000036320	YTHDC1	55	61.871	ENSMAMG00000013122	ythdc1	58	66.826	Mastacembelus_armatus
ENSCATG00000036320	YTHDC1	93	53.606	ENSMZEG00005023173	ythdc1	59	66.268	Maylandia_zebra
ENSCATG00000036320	YTHDC1	97	81.382	ENSMGAG00000010391	YTHDC1	87	79.350	Meleagris_gallopavo
ENSCATG00000036320	YTHDC1	100	97.011	ENSMAUG00000001286	Ythdc1	100	97.011	Mesocricetus_auratus
ENSCATG00000036320	YTHDC1	100	98.236	ENSMICG00000034640	YTHDC1	100	98.236	Microcebus_murinus
ENSCATG00000036320	YTHDC1	100	97.283	ENSMOCG00000020201	Ythdc1	100	97.283	Microtus_ochrogaster
ENSCATG00000036320	YTHDC1	85	73.818	ENSMODG00000014337	-	95	69.802	Monodelphis_domestica
ENSCATG00000036320	YTHDC1	65	56.904	ENSMODG00000009173	-	88	60.427	Monodelphis_domestica
ENSCATG00000036320	YTHDC1	97	87.692	ENSMODG00000020754	-	92	87.537	Monodelphis_domestica
ENSCATG00000036320	YTHDC1	95	52.987	ENSMODG00000010076	-	72	52.663	Monodelphis_domestica
ENSCATG00000036320	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	69.054	Monopterus_albus
ENSCATG00000036320	YTHDC1	100	95.396	MGP_CAROLIEiJ_G0027347	Ythdc1	96	95.396	Mus_caroli
ENSCATG00000036320	YTHDC1	100	97.015	ENSMUSG00000035851	Ythdc1	100	97.015	Mus_musculus
ENSCATG00000036320	YTHDC1	100	97.286	MGP_PahariEiJ_G0017126	Ythdc1	100	97.286	Mus_pahari
ENSCATG00000036320	YTHDC1	100	97.286	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.286	Mus_spretus
ENSCATG00000036320	YTHDC1	93	72.174	ENSMPUG00000001743	YTHDC1	53	96.675	Mustela_putorius_furo
ENSCATG00000036320	YTHDC1	99	96.281	ENSMLUG00000016300	YTHDC1	100	96.281	Myotis_lucifugus
ENSCATG00000036320	YTHDC1	81	88.813	ENSNGAG00000024000	Ythdc1	93	96.682	Nannospalax_galili
ENSCATG00000036320	YTHDC1	59	63.889	ENSNBRG00000007663	ythdc1	70	66.019	Neolamprologus_brichardi
ENSCATG00000036320	YTHDC1	100	98.694	ENSNLEG00000009202	YTHDC1	99	99.037	Nomascus_leucogenys
ENSCATG00000036320	YTHDC1	82	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSCATG00000036320	YTHDC1	75	98.867	ENSOPRG00000008986	YTHDC1	74	98.867	Ochotona_princeps
ENSCATG00000036320	YTHDC1	100	97.042	ENSODEG00000001715	YTHDC1	100	97.042	Octodon_degus
ENSCATG00000036320	YTHDC1	93	53.996	ENSONIG00000012651	ythdc1	59	66.746	Oreochromis_niloticus
ENSCATG00000036320	YTHDC1	88	77.217	ENSOANG00000014398	YTHDC1	55	97.468	Ornithorhynchus_anatinus
ENSCATG00000036320	YTHDC1	97	76.952	ENSOCUG00000015886	YTHDC1	57	93.842	Oryctolagus_cuniculus
ENSCATG00000036320	YTHDC1	56	61.111	ENSORLG00000030544	ythdc1	60	66.988	Oryzias_latipes
ENSCATG00000036320	YTHDC1	56	60.386	ENSORLG00020019316	ythdc1	60	66.988	Oryzias_latipes_hni
ENSCATG00000036320	YTHDC1	56	61.520	ENSOMEG00000000551	ythdc1	72	53.818	Oryzias_melastigma
ENSCATG00000036320	YTHDC1	100	96.603	ENSOGAG00000003362	YTHDC1	100	96.603	Otolemur_garnettii
ENSCATG00000036320	YTHDC1	100	96.336	ENSOARG00000008633	YTHDC1	100	96.336	Ovis_aries
ENSCATG00000036320	YTHDC1	100	99.592	ENSPPAG00000041315	YTHDC1	100	99.592	Pan_paniscus
ENSCATG00000036320	YTHDC1	100	97.561	ENSPPRG00000011979	YTHDC1	100	97.561	Panthera_pardus
ENSCATG00000036320	YTHDC1	99	97.390	ENSPTIG00000015527	YTHDC1	100	97.390	Panthera_tigris_altaica
ENSCATG00000036320	YTHDC1	100	99.592	ENSPTRG00000016105	YTHDC1	100	99.592	Pan_troglodytes
ENSCATG00000036320	YTHDC1	100	100.000	ENSPANG00000021590	YTHDC1	100	100.000	Papio_anubis
ENSCATG00000036320	YTHDC1	97	67.366	ENSPKIG00000018497	ythdc1	93	68.149	Paramormyrops_kingsleyae
ENSCATG00000036320	YTHDC1	97	85.221	ENSPSIG00000002782	YTHDC1	92	85.905	Pelodiscus_sinensis
ENSCATG00000036320	YTHDC1	55	56.667	ENSPMGG00000000970	-	72	64.808	Periophthalmus_magnuspinnatus
ENSCATG00000036320	YTHDC1	99	97.571	ENSPEMG00000013850	Ythdc1	100	97.571	Peromyscus_maniculatus_bairdii
ENSCATG00000036320	YTHDC1	97	87.500	ENSPCIG00000006870	YTHDC1	92	88.110	Phascolarctos_cinereus
ENSCATG00000036320	YTHDC1	51	65.693	ENSPFOG00000013404	ythdc1	60	65.625	Poecilia_formosa
ENSCATG00000036320	YTHDC1	51	65.693	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSCATG00000036320	YTHDC1	51	65.693	ENSPMEG00000009238	ythdc1	60	65.625	Poecilia_mexicana
ENSCATG00000036320	YTHDC1	68	63.370	ENSPREG00000016973	ythdc1	76	51.521	Poecilia_reticulata
ENSCATG00000036320	YTHDC1	87	98.438	ENSPPYG00000014726	YTHDC1	100	98.438	Pongo_abelii
ENSCATG00000036320	YTHDC1	77	100.000	ENSPCAG00000009607	YTHDC1	77	87.755	Procavia_capensis
ENSCATG00000036320	YTHDC1	100	93.758	ENSPCOG00000019105	YTHDC1	100	93.758	Propithecus_coquereli
ENSCATG00000036320	YTHDC1	100	94.324	ENSPVAG00000015551	YTHDC1	100	94.324	Pteropus_vampyrus
ENSCATG00000036320	YTHDC1	93	53.606	ENSPNYG00000011687	ythdc1	59	66.268	Pundamilia_nyererei
ENSCATG00000036320	YTHDC1	97	68.311	ENSPNAG00000028365	ythdc1	93	68.714	Pygocentrus_nattereri
ENSCATG00000036320	YTHDC1	100	96.346	ENSRNOG00000001996	Ythdc1	100	96.346	Rattus_norvegicus
ENSCATG00000036320	YTHDC1	100	98.321	ENSRBIG00000028279	YTHDC1	99	98.762	Rhinopithecus_bieti
ENSCATG00000036320	YTHDC1	100	99.859	ENSRROG00000035028	YTHDC1	100	99.859	Rhinopithecus_roxellana
ENSCATG00000036320	YTHDC1	100	99.592	ENSSBOG00000022353	YTHDC1	100	99.592	Saimiri_boliviensis_boliviensis
ENSCATG00000036320	YTHDC1	97	87.692	ENSSHAG00000002538	YTHDC1	91	87.519	Sarcophilus_harrisii
ENSCATG00000036320	YTHDC1	97	66.983	ENSSFOG00015003298	ythdc1	60	84.419	Scleropages_formosus
ENSCATG00000036320	YTHDC1	57	59.251	ENSSMAG00000009086	ythdc1	60	65.947	Scophthalmus_maximus
ENSCATG00000036320	YTHDC1	55	61.017	ENSSDUG00000022008	ythdc1	59	67.225	Seriola_dumerili
ENSCATG00000036320	YTHDC1	55	61.017	ENSSLDG00000007926	ythdc1	59	67.225	Seriola_lalandi_dorsalis
ENSCATG00000036320	YTHDC1	79	97.270	ENSSARG00000010960	YTHDC1	100	97.270	Sorex_araneus
ENSCATG00000036320	YTHDC1	97	79.693	ENSSPUG00000009357	YTHDC1	92	79.545	Sphenodon_punctatus
ENSCATG00000036320	YTHDC1	57	61.261	ENSSPAG00000011449	ythdc1	59	67.703	Stegastes_partitus
ENSCATG00000036320	YTHDC1	100	96.896	ENSSSCG00000035505	YTHDC1	100	96.896	Sus_scrofa
ENSCATG00000036320	YTHDC1	97	84.261	ENSTGUG00000004452	-	92	85.359	Taeniopygia_guttata
ENSCATG00000036320	YTHDC1	63	70.000	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSCATG00000036320	YTHDC1	90	62.069	ENSTNIG00000013243	ythdc1	89	65.068	Tetraodon_nigroviridis
ENSCATG00000036320	YTHDC1	96	85.271	ENSTBEG00000011546	YTHDC1	92	86.657	Tupaia_belangeri
ENSCATG00000036320	YTHDC1	100	95.535	ENSTTRG00000005083	YTHDC1	100	95.535	Tursiops_truncatus
ENSCATG00000036320	YTHDC1	93	97.579	ENSUAMG00000010388	YTHDC1	100	97.579	Ursus_americanus
ENSCATG00000036320	YTHDC1	99	83.081	ENSUMAG00000013668	YTHDC1	98	83.081	Ursus_maritimus
ENSCATG00000036320	YTHDC1	100	97.746	ENSVPAG00000009040	YTHDC1	100	97.746	Vicugna_pacos
ENSCATG00000036320	YTHDC1	99	97.671	ENSVVUG00000005387	YTHDC1	100	96.366	Vulpes_vulpes
ENSCATG00000036320	YTHDC1	97	70.229	ENSXETG00000017960	ythdc1	91	72.546	Xenopus_tropicalis
ENSCATG00000036320	YTHDC1	71	50.000	ENSXCOG00000000530	ythdc1	87	51.361	Xiphophorus_couchianus
ENSCATG00000036320	YTHDC1	51	65.091	ENSXMAG00000005196	ythdc1	61	64.904	Xiphophorus_maculatus