EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000036327 (Gene tree)
Gene ID: 105590906
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 52594 bases
Position: chrKQ010045.1:4159541-4212134
Accession: 105590906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000025741	RRM_1	PF00076.22	8.1e-13	1	1
ENSCATP00000025742	RRM_1	PF00076.22	8.1e-13	1	1
ENSCATP00000025735	RRM_1	PF00076.22	1.2e-12	1	1
ENSCATP00000025739	RRM_1	PF00076.22	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000049967	SLIRP-201	2395	XM_012070996	ENSCATP00000025735	109 (aa)	XP_011926386	A0A2K5MKU0
ENSCATT00000049971	SLIRP-202	339	-	ENSCATP00000025739	112 (aa)	-	A0A2K5MKJ7
ENSCATT00000049973	SLIRP-203	297	-	ENSCATP00000025741	98 (aa)	-	A0A2K5MKI9
ENSCATT00000049974	SLIRP-204	279	-	ENSCATP00000025742	93 (aa)	-	A0A2K5MKK6

Gene Model

Click here to download ENSCATG00000036327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000036327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000036327	SLIRP	89	35.385	ENSCATG00000032328	HNRNPAB	58	32.895
ENSCATG00000036327	SLIRP	87	33.696	ENSCATG00000040879	MSI2	62	31.646
ENSCATG00000036327	SLIRP	74	31.765	ENSCATG00000032133	RBM38	70	31.765
ENSCATG00000036327	SLIRP	87	30.263	ENSCATG00000030349	-	73	30.263
ENSCATG00000036327	SLIRP	77	32.308	ENSCATG00000033325	HNRNPA2B1	54	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000036327	SLIRP	84	85.897	ENSG00000119705	SLIRP	100	85.870	Homo_sapiens
ENSCATG00000036327	SLIRP	72	58.209	ENSAPOG00000001298	slirp	76	56.579	Acanthochromis_polyacanthus
ENSCATG00000036327	SLIRP	96	79.775	ENSAMEG00000003975	SLIRP	100	79.121	Ailuropoda_melanoleuca
ENSCATG00000036327	SLIRP	72	59.701	ENSACIG00000023083	slirp	75	57.895	Amphilophus_citrinellus
ENSCATG00000036327	SLIRP	72	58.209	ENSAOCG00000006342	slirp	77	56.579	Amphiprion_ocellaris
ENSCATG00000036327	SLIRP	72	58.209	ENSAPEG00000015917	slirp	77	56.579	Amphiprion_percula
ENSCATG00000036327	SLIRP	72	58.209	ENSAPEG00000015719	-	78	56.579	Amphiprion_percula
ENSCATG00000036327	SLIRP	72	59.701	ENSATEG00000013525	slirp	74	56.757	Anabas_testudineus
ENSCATG00000036327	SLIRP	72	59.701	ENSAMXG00000018693	slirp	87	50.575	Astyanax_mexicanus
ENSCATG00000036327	SLIRP	99	88.043	ENSCJAG00000016946	SLIRP	99	88.043	Callithrix_jacchus
ENSCATG00000036327	SLIRP	95	77.273	ENSCAFG00020015876	-	100	71.171	Canis_lupus_dingo
ENSCATG00000036327	SLIRP	99	81.522	ENSCCAG00000030130	SLIRP	100	79.817	Cebus_capucinus
ENSCATG00000036327	SLIRP	100	97.248	ENSCSAG00000011736	SLIRP	100	97.248	Chlorocebus_sabaeus
ENSCATG00000036327	SLIRP	72	59.701	ENSCPBG00000026327	SLIRP	71	58.571	Chrysemys_picta_bellii
ENSCATG00000036327	SLIRP	86	96.429	ENSCANG00000032892	SLIRP	100	94.898	Colobus_angolensis_palliatus
ENSCATG00000036327	SLIRP	95	71.591	ENSCGRG00001024068	Slirp	100	63.964	Cricetulus_griseus_chok1gshd
ENSCATG00000036327	SLIRP	95	71.591	ENSCGRG00000017440	Slirp	100	63.964	Cricetulus_griseus_crigri
ENSCATG00000036327	SLIRP	95	50.000	ENSCSEG00000015766	slirp	84	48.913	Cynoglossus_semilaevis
ENSCATG00000036327	SLIRP	72	65.672	ENSCVAG00000012504	slirp	70	64.789	Cyprinodon_variegatus
ENSCATG00000036327	SLIRP	73	61.765	ENSDARG00000097753	slirp	74	60.526	Danio_rerio
ENSCATG00000036327	SLIRP	82	65.556	ENSDNOG00000007721	SLIRP	100	61.818	Dasypus_novemcinctus
ENSCATG00000036327	SLIRP	95	71.591	ENSDORG00000012379	Slirp	100	65.766	Dipodomys_ordii
ENSCATG00000036327	SLIRP	90	66.327	ENSETEG00000010345	SLIRP	100	66.972	Echinops_telfairi
ENSCATG00000036327	SLIRP	95	81.818	ENSEASG00005020193	SLIRP	100	75.676	Equus_asinus_asinus
ENSCATG00000036327	SLIRP	76	67.606	ENSEEUG00000007257	SLIRP	90	59.341	Erinaceus_europaeus
ENSCATG00000036327	SLIRP	70	60.000	ENSELUG00000016800	slirp	70	57.746	Esox_lucius
ENSCATG00000036327	SLIRP	97	80.000	ENSFCAG00000036326	SLIRP	98	77.320	Felis_catus
ENSCATG00000036327	SLIRP	72	56.716	ENSFALG00000012583	SLIRP	92	47.475	Ficedula_albicollis
ENSCATG00000036327	SLIRP	96	67.021	ENSFDAG00000008347	SLIRP	100	61.062	Fukomys_damarensis
ENSCATG00000036327	SLIRP	62	62.069	ENSFHEG00000004709	slirp	73	59.701	Fundulus_heteroclitus
ENSCATG00000036327	SLIRP	79	54.545	ENSGMOG00000016948	slirp	83	48.276	Gadus_morhua
ENSCATG00000036327	SLIRP	79	52.809	ENSGALG00000031238	SLIRP	100	46.296	Gallus_gallus
ENSCATG00000036327	SLIRP	75	65.714	ENSGAFG00000010998	slirp	77	62.338	Gambusia_affinis
ENSCATG00000036327	SLIRP	72	59.701	ENSGACG00000020137	slirp	97	53.012	Gasterosteus_aculeatus
ENSCATG00000036327	SLIRP	79	59.740	ENSGAGG00000009953	SLIRP	52	64.474	Gopherus_agassizii
ENSCATG00000036327	SLIRP	85	86.076	ENSGGOG00000011059	-	100	86.022	Gorilla_gorilla
ENSCATG00000036327	SLIRP	100	62.162	ENSHGLG00000018491	SLIRP	100	62.162	Heterocephalus_glaber_female
ENSCATG00000036327	SLIRP	100	62.162	ENSHGLG00100014153	SLIRP	100	62.162	Heterocephalus_glaber_male
ENSCATG00000036327	SLIRP	72	64.179	ENSHCOG00000006795	slirp	89	55.682	Hippocampus_comes
ENSCATG00000036327	SLIRP	72	59.701	ENSIPUG00000010214	SLIRP	87	50.575	Ictalurus_punctatus
ENSCATG00000036327	SLIRP	90	69.000	ENSSTOG00000034316	SLIRP	100	71.171	Ictidomys_tridecemlineatus
ENSCATG00000036327	SLIRP	78	51.316	ENSKMAG00000002038	slirp	72	51.316	Kryptolebias_marmoratus
ENSCATG00000036327	SLIRP	72	59.701	ENSLBEG00000007564	slirp	76	57.895	Labrus_bergylta
ENSCATG00000036327	SLIRP	81	55.056	ENSLACG00000013434	SLIRP	86	55.056	Latimeria_chalumnae
ENSCATG00000036327	SLIRP	100	97.959	ENSMFAG00000042960	SLIRP	100	97.959	Macaca_fascicularis
ENSCATG00000036327	SLIRP	100	98.980	ENSMMUG00000029256	SLIRP	100	98.980	Macaca_mulatta
ENSCATG00000036327	SLIRP	100	97.959	ENSMNEG00000028921	SLIRP	100	97.959	Macaca_nemestrina
ENSCATG00000036327	SLIRP	100	100.000	ENSMLEG00000043644	SLIRP	100	100.000	Mandrillus_leucophaeus
ENSCATG00000036327	SLIRP	80	56.180	ENSMZEG00005004617	slirp	90	56.180	Maylandia_zebra
ENSCATG00000036327	SLIRP	100	66.667	ENSMAUG00000003857	Slirp	100	66.667	Mesocricetus_auratus
ENSCATG00000036327	SLIRP	96	74.157	ENSMICG00000012080	SLIRP	100	69.231	Microcebus_murinus
ENSCATG00000036327	SLIRP	95	73.864	ENSMOCG00000016019	Slirp	96	70.370	Microtus_ochrogaster
ENSCATG00000036327	SLIRP	72	56.716	ENSMMOG00000018268	slirp	76	55.263	Mola_mola
ENSCATG00000036327	SLIRP	74	59.420	ENSMODG00000005207	-	100	59.155	Monodelphis_domestica
ENSCATG00000036327	SLIRP	92	47.000	ENSMALG00000012581	slirp	99	47.000	Monopterus_albus
ENSCATG00000036327	SLIRP	95	76.136	MGP_CAROLIEiJ_G0017995	Slirp	100	70.370	Mus_caroli
ENSCATG00000036327	SLIRP	95	77.273	ENSMUSG00000021040	Slirp	92	75.824	Mus_musculus
ENSCATG00000036327	SLIRP	95	77.273	MGP_SPRETEiJ_G0018840	Slirp	96	71.296	Mus_spretus
ENSCATG00000036327	SLIRP	84	69.149	ENSMLUG00000024998	-	100	67.568	Myotis_lucifugus
ENSCATG00000036327	SLIRP	90	67.000	ENSMLUG00000029544	-	100	66.667	Myotis_lucifugus
ENSCATG00000036327	SLIRP	95	68.182	ENSNGAG00000016363	Slirp	100	66.667	Nannospalax_galili
ENSCATG00000036327	SLIRP	93	78.218	ENSNLEG00000027238	-	97	78.218	Nomascus_leucogenys
ENSCATG00000036327	SLIRP	99	84.783	ENSNLEG00000032459	-	99	84.783	Nomascus_leucogenys
ENSCATG00000036327	SLIRP	96	80.899	ENSODEG00000012580	SLIRP	99	81.319	Octodon_degus
ENSCATG00000036327	SLIRP	80	54.023	ENSONIG00000011692	slirp	86	54.023	Oreochromis_niloticus
ENSCATG00000036327	SLIRP	91	63.529	ENSOANG00000022366	SLIRP	87	57.843	Ornithorhynchus_anatinus
ENSCATG00000036327	SLIRP	72	58.209	ENSORLG00000010761	slirp	59	56.579	Oryzias_latipes
ENSCATG00000036327	SLIRP	72	59.701	ENSORLG00020022188	slirp	76	57.895	Oryzias_latipes_hni
ENSCATG00000036327	SLIRP	95	50.000	ENSORLG00015020171	slirp	87	49.485	Oryzias_latipes_hsok
ENSCATG00000036327	SLIRP	72	59.701	ENSOMEG00000019321	slirp	76	57.895	Oryzias_melastigma
ENSCATG00000036327	SLIRP	85	86.076	ENSPPAG00000040710	-	100	86.022	Pan_paniscus
ENSCATG00000036327	SLIRP	99	78.351	ENSPPRG00000014350	SLIRP	98	78.351	Panthera_pardus
ENSCATG00000036327	SLIRP	99	78.351	ENSPTIG00000014196	SLIRP	98	78.351	Panthera_tigris_altaica
ENSCATG00000036327	SLIRP	85	86.076	ENSPTRG00000030691	SLIRP	100	86.022	Pan_troglodytes
ENSCATG00000036327	SLIRP	100	98.980	ENSPANG00000026323	SLIRP	100	98.980	Papio_anubis
ENSCATG00000036327	SLIRP	61	59.649	ENSPKIG00000008831	slirp	76	51.948	Paramormyrops_kingsleyae
ENSCATG00000036327	SLIRP	72	67.164	ENSPMGG00000010541	slirp	86	63.636	Periophthalmus_magnuspinnatus
ENSCATG00000036327	SLIRP	83	72.727	ENSPEMG00000013234	Slirp	96	66.055	Peromyscus_maniculatus_bairdii
ENSCATG00000036327	SLIRP	65	53.333	ENSPMAG00000009355	slirp	76	50.000	Petromyzon_marinus
ENSCATG00000036327	SLIRP	85	56.790	ENSPCIG00000026842	-	89	56.627	Phascolarctos_cinereus
ENSCATG00000036327	SLIRP	72	64.179	ENSPFOG00000006758	slirp	76	60.526	Poecilia_formosa
ENSCATG00000036327	SLIRP	72	64.179	ENSPLAG00000011140	slirp	88	52.273	Poecilia_latipinna
ENSCATG00000036327	SLIRP	72	64.179	ENSPMEG00000019535	slirp	76	60.526	Poecilia_mexicana
ENSCATG00000036327	SLIRP	72	64.179	ENSPREG00000011673	slirp	76	60.526	Poecilia_reticulata
ENSCATG00000036327	SLIRP	90	77.551	ENSPPYG00000006030	SLIRP	100	77.982	Pongo_abelii
ENSCATG00000036327	SLIRP	96	74.157	ENSPCOG00000015159	SLIRP	100	68.468	Propithecus_coquereli
ENSCATG00000036327	SLIRP	72	67.164	ENSPNAG00000008633	slirp	89	59.091	Pygocentrus_nattereri
ENSCATG00000036327	SLIRP	87	86.316	ENSRBIG00000035817	-	100	86.792	Rhinopithecus_bieti
ENSCATG00000036327	SLIRP	100	96.939	ENSRBIG00000032222	-	100	96.939	Rhinopithecus_bieti
ENSCATG00000036327	SLIRP	81	96.000	ENSRBIG00000031396	-	86	95.349	Rhinopithecus_bieti
ENSCATG00000036327	SLIRP	88	89.655	ENSRBIG00000032998	-	91	89.796	Rhinopithecus_bieti
ENSCATG00000036327	SLIRP	81	94.667	ENSRROG00000035604	-	86	94.186	Rhinopithecus_roxellana
ENSCATG00000036327	SLIRP	89	96.552	ENSRROG00000036656	-	100	95.918	Rhinopithecus_roxellana
ENSCATG00000036327	SLIRP	88	91.765	ENSRROG00000017133	-	100	91.667	Rhinopithecus_roxellana
ENSCATG00000036327	SLIRP	84	93.590	ENSRROG00000041312	-	96	90.000	Rhinopithecus_roxellana
ENSCATG00000036327	SLIRP	99	82.609	ENSSBOG00000020014	SLIRP	99	82.609	Saimiri_boliviensis_boliviensis
ENSCATG00000036327	SLIRP	78	54.023	ENSSFOG00015011165	slirp	88	54.023	Scleropages_formosus
ENSCATG00000036327	SLIRP	80	41.758	ENSSMAG00000012930	slirp	89	41.758	Scophthalmus_maximus
ENSCATG00000036327	SLIRP	80	55.172	ENSSDUG00000021883	slirp	56	55.172	Seriola_dumerili
ENSCATG00000036327	SLIRP	80	55.172	ENSSLDG00000023136	slirp	77	55.172	Seriola_lalandi_dorsalis
ENSCATG00000036327	SLIRP	86	58.025	ENSSPUG00000009346	SLIRP	90	56.818	Sphenodon_punctatus
ENSCATG00000036327	SLIRP	72	55.224	ENSSPAG00000013477	slirp	74	52.703	Stegastes_partitus
ENSCATG00000036327	SLIRP	100	70.270	ENSSSCG00000028167	SLIRP	100	70.270	Sus_scrofa
ENSCATG00000036327	SLIRP	72	58.209	ENSTGUG00000012337	SLIRP	86	52.128	Taeniopygia_guttata
ENSCATG00000036327	SLIRP	95	46.067	ENSTRUG00000020127	slirp	71	54.167	Takifugu_rubripes
ENSCATG00000036327	SLIRP	95	79.545	ENSUAMG00000022445	SLIRP	100	72.973	Ursus_americanus
ENSCATG00000036327	SLIRP	95	79.545	ENSUMAG00000007166	SLIRP	100	73.874	Ursus_maritimus
ENSCATG00000036327	SLIRP	100	71.560	ENSVPAG00000001781	SLIRP	100	71.560	Vicugna_pacos
ENSCATG00000036327	SLIRP	83	79.221	ENSVVUG00000004436	SLIRP	100	72.072	Vulpes_vulpes
ENSCATG00000036327	SLIRP	72	62.687	ENSXETG00000030343	SLIRP	79	62.857	Xenopus_tropicalis
ENSCATG00000036327	SLIRP	74	63.768	ENSXCOG00000009422	slirp	76	60.526	Xiphophorus_couchianus
ENSCATG00000036327	SLIRP	74	65.217	ENSXMAG00000015655	slirp	88	53.409	Xiphophorus_maculatus