EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000036434 (Gene tree)
Gene ID: 105591929
Gene Symbol: PSPC1
Alias: FLJ10955|PSP1
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 77136 bases
Position: chrKQ010153.1:2931415-3008550
Accession: 105591929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000026002	RRM_1	PF00076.22	1.4e-32	1	2
ENSCATP00000026002	RRM_1	PF00076.22	1.4e-32	2	2
ENSCATP00000026001	RRM_1	PF00076.22	3.1e-32	1	2
ENSCATP00000026001	RRM_1	PF00076.22	3.1e-32	2	2
ENSCATP00000025989	RRM_1	PF00076.22	4.2e-32	1	2
ENSCATP00000025989	RRM_1	PF00076.22	4.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000050223	PSPC1-201	2132	XM_012073388	ENSCATP00000025989	523 (aa)	XP_011928778	A0A2K5MLA7
ENSCATT00000050235	PSPC1-202	1410	-	ENSCATP00000026001	469 (aa)	-	A0A2K5MLB5
ENSCATT00000050236	PSPC1-203	1089	-	ENSCATP00000026002	362 (aa)	-	A0A2K5MLA3

Gene Model

Click here to download ENSCATG00000036434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000036434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000036434	PSPC1	90	46.687	ENSCATG00000032664	-	51	40.000
ENSCATG00000036434	PSPC1	80	64.360	ENSCATG00000039509	NONO	76	61.878
ENSCATG00000036434	PSPC1	93	68.249	ENSCATG00000036179	-	54	63.904

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000036434	PSPC1	100	99.235	ENSG00000121390	PSPC1	100	99.235	Homo_sapiens
ENSCATG00000036434	PSPC1	90	81.173	ENSAPOG00000015946	pspc1	79	73.488	Acanthochromis_polyacanthus
ENSCATG00000036434	PSPC1	100	98.470	ENSAMEG00000017420	PSPC1	100	98.470	Ailuropoda_melanoleuca
ENSCATG00000036434	PSPC1	90	71.914	ENSACIG00000018695	pspc1	87	59.448	Amphilophus_citrinellus
ENSCATG00000036434	PSPC1	90	80.556	ENSAOCG00000005279	pspc1	78	73.023	Amphiprion_ocellaris
ENSCATG00000036434	PSPC1	90	80.556	ENSAPEG00000015927	pspc1	79	73.023	Amphiprion_percula
ENSCATG00000036434	PSPC1	90	67.593	ENSATEG00000004878	pspc1	76	61.687	Anabas_testudineus
ENSCATG00000036434	PSPC1	90	74.468	ENSAPLG00000003643	SFPQ	69	69.126	Anas_platyrhynchos
ENSCATG00000036434	PSPC1	77	93.812	ENSAPLG00000006246	PSPC1	100	93.812	Anas_platyrhynchos
ENSCATG00000036434	PSPC1	90	96.626	ENSACAG00000002093	PSPC1	88	91.631	Anolis_carolinensis
ENSCATG00000036434	PSPC1	81	69.388	ENSACAG00000013307	-	56	64.917	Anolis_carolinensis
ENSCATG00000036434	PSPC1	100	98.470	ENSANAG00000000059	PSPC1	100	98.470	Aotus_nancymaae
ENSCATG00000036434	PSPC1	90	72.000	ENSACLG00000027220	pspc1	87	58.672	Astatotilapia_calliptera
ENSCATG00000036434	PSPC1	89	79.573	ENSAMXG00000036881	pspc1	80	72.874	Astyanax_mexicanus
ENSCATG00000036434	PSPC1	100	95.793	ENSBTAG00000003934	PSPC1	100	95.793	Bos_taurus
ENSCATG00000036434	PSPC1	100	98.470	ENSCJAG00000004554	PSPC1	100	98.470	Callithrix_jacchus
ENSCATG00000036434	PSPC1	100	98.470	ENSCAFG00020002009	PSPC1	100	98.470	Canis_lupus_dingo
ENSCATG00000036434	PSPC1	100	95.793	ENSCHIG00000016708	PSPC1	100	95.793	Capra_hircus
ENSCATG00000036434	PSPC1	80	88.152	ENSTSYG00000032882	PSPC1	93	85.511	Carlito_syrichta
ENSCATG00000036434	PSPC1	100	96.558	ENSCPOG00000000395	PSPC1	100	96.558	Cavia_porcellus
ENSCATG00000036434	PSPC1	100	98.470	ENSCCAG00000033498	PSPC1	100	98.470	Cebus_capucinus
ENSCATG00000036434	PSPC1	88	87.905	ENSCLAG00000005241	PSPC1	99	87.905	Chinchilla_lanigera
ENSCATG00000036434	PSPC1	97	97.143	ENSCHOG00000008913	PSPC1	100	91.396	Choloepus_hoffmanni
ENSCATG00000036434	PSPC1	91	95.758	ENSCPBG00000020859	PSPC1	89	94.004	Chrysemys_picta_bellii
ENSCATG00000036434	PSPC1	85	58.766	ENSCSAVG00000003533	-	53	61.786	Ciona_savignyi
ENSCATG00000036434	PSPC1	72	100.000	ENSCANG00000018948	PSPC1	87	100.000	Colobus_angolensis_palliatus
ENSCATG00000036434	PSPC1	100	96.941	ENSCGRG00001018368	Pspc1	100	96.941	Cricetulus_griseus_chok1gshd
ENSCATG00000036434	PSPC1	100	96.941	ENSCGRG00000011724	Pspc1	100	96.941	Cricetulus_griseus_crigri
ENSCATG00000036434	PSPC1	88	78.616	ENSCVAG00000007679	-	78	68.246	Cyprinodon_variegatus
ENSCATG00000036434	PSPC1	95	77.259	ENSDARG00000006621	pspc1	100	67.633	Danio_rerio
ENSCATG00000036434	PSPC1	100	96.941	ENSDNOG00000011078	PSPC1	100	96.941	Dasypus_novemcinctus
ENSCATG00000036434	PSPC1	100	93.881	ENSDORG00000016050	Pspc1	100	93.881	Dipodomys_ordii
ENSCATG00000036434	PSPC1	55	100.000	ENSETEG00000000502	-	72	100.000	Echinops_telfairi
ENSCATG00000036434	PSPC1	89	73.538	ENSEBUG00000003964	-	62	72.254	Eptatretus_burgeri
ENSCATG00000036434	PSPC1	86	45.238	ENSEBUG00000010133	pspc1	72	51.273	Eptatretus_burgeri
ENSCATG00000036434	PSPC1	100	97.897	ENSEASG00005000119	PSPC1	100	97.897	Equus_asinus_asinus
ENSCATG00000036434	PSPC1	100	97.897	ENSECAG00000017286	PSPC1	100	97.897	Equus_caballus
ENSCATG00000036434	PSPC1	88	81.988	ENSEEUG00000011288	-	100	64.818	Erinaceus_europaeus
ENSCATG00000036434	PSPC1	95	78.613	ENSELUG00000003746	pspc1	79	80.967	Esox_lucius
ENSCATG00000036434	PSPC1	100	98.470	ENSFCAG00000027841	PSPC1	100	98.470	Felis_catus
ENSCATG00000036434	PSPC1	91	96.364	ENSFALG00000008750	PSPC1	99	88.145	Ficedula_albicollis
ENSCATG00000036434	PSPC1	100	94.646	ENSFDAG00000002617	PSPC1	100	94.646	Fukomys_damarensis
ENSCATG00000036434	PSPC1	80	82.986	ENSGMOG00000015074	pspc1	86	65.443	Gadus_morhua
ENSCATG00000036434	PSPC1	90	97.231	ENSGALG00000017142	PSPC1	89	94.647	Gallus_gallus
ENSCATG00000036434	PSPC1	90	77.914	ENSGAFG00000006327	pspc1	67	78.154	Gambusia_affinis
ENSCATG00000036434	PSPC1	90	74.074	ENSGACG00000014901	pspc1	92	73.414	Gasterosteus_aculeatus
ENSCATG00000036434	PSPC1	91	95.758	ENSGAGG00000019164	PSPC1	89	94.004	Gopherus_agassizii
ENSCATG00000036434	PSPC1	94	72.012	ENSGAGG00000017325	-	57	67.914	Gopherus_agassizii
ENSCATG00000036434	PSPC1	100	99.044	ENSGGOG00000003414	PSPC1	100	99.044	Gorilla_gorilla
ENSCATG00000036434	PSPC1	90	79.321	ENSHBUG00000001139	pspc1	87	69.528	Haplochromis_burtoni
ENSCATG00000036434	PSPC1	100	96.558	ENSHGLG00000018811	PSPC1	100	96.558	Heterocephalus_glaber_female
ENSCATG00000036434	PSPC1	83	97.682	ENSHGLG00100007962	PSPC1	100	92.286	Heterocephalus_glaber_male
ENSCATG00000036434	PSPC1	90	74.154	ENSHCOG00000013251	pspc1	83	71.658	Hippocampus_comes
ENSCATG00000036434	PSPC1	94	80.814	ENSIPUG00000013192	pspc1	88	73.673	Ictalurus_punctatus
ENSCATG00000036434	PSPC1	100	97.706	ENSSTOG00000026833	PSPC1	100	97.706	Ictidomys_tridecemlineatus
ENSCATG00000036434	PSPC1	100	97.132	ENSJJAG00000018334	Pspc1	100	97.132	Jaculus_jaculus
ENSCATG00000036434	PSPC1	80	69.204	ENSKMAG00000013525	-	84	54.194	Kryptolebias_marmoratus
ENSCATG00000036434	PSPC1	95	76.232	ENSLBEG00000004474	pspc1	72	75.510	Labrus_bergylta
ENSCATG00000036434	PSPC1	88	87.227	ENSLACG00000010762	PSPC1	88	84.914	Latimeria_chalumnae
ENSCATG00000036434	PSPC1	90	87.037	ENSLOCG00000010832	pspc1	91	84.165	Lepisosteus_oculatus
ENSCATG00000036434	PSPC1	100	96.941	ENSLAFG00000010968	PSPC1	100	96.941	Loxodonta_africana
ENSCATG00000036434	PSPC1	100	99.618	ENSMFAG00000032728	PSPC1	100	99.618	Macaca_fascicularis
ENSCATG00000036434	PSPC1	100	99.618	ENSMMUG00000020262	PSPC1	100	99.618	Macaca_mulatta
ENSCATG00000036434	PSPC1	100	99.618	ENSMNEG00000027401	PSPC1	100	99.618	Macaca_nemestrina
ENSCATG00000036434	PSPC1	100	100.000	ENSMLEG00000039043	PSPC1	99	100.000	Mandrillus_leucophaeus
ENSCATG00000036434	PSPC1	90	78.086	ENSMAMG00000004333	pspc1	77	71.395	Mastacembelus_armatus
ENSCATG00000036434	PSPC1	90	72.000	ENSMZEG00005005726	pspc1	87	58.672	Maylandia_zebra
ENSCATG00000036434	PSPC1	77	93.596	ENSMGAG00000015134	PSPC1	100	93.596	Meleagris_gallopavo
ENSCATG00000036434	PSPC1	99	90.948	ENSMAUG00000021067	Pspc1	99	91.126	Mesocricetus_auratus
ENSCATG00000036434	PSPC1	100	98.088	ENSMICG00000013970	PSPC1	100	98.088	Microcebus_murinus
ENSCATG00000036434	PSPC1	100	97.132	ENSMOCG00000006060	Pspc1	100	97.132	Microtus_ochrogaster
ENSCATG00000036434	PSPC1	95	54.942	ENSMMOG00000004352	pspc1	59	52.395	Mola_mola
ENSCATG00000036434	PSPC1	99	96.970	ENSMODG00000008029	PSPC1	78	96.495	Monodelphis_domestica
ENSCATG00000036434	PSPC1	94	73.563	ENSMALG00000008914	pspc1	88	67.377	Monopterus_albus
ENSCATG00000036434	PSPC1	100	96.947	MGP_CAROLIEiJ_G0019341	Pspc1	100	96.947	Mus_caroli
ENSCATG00000036434	PSPC1	100	97.137	ENSMUSG00000021938	Pspc1	100	97.137	Mus_musculus
ENSCATG00000036434	PSPC1	100	96.947	MGP_PahariEiJ_G0030359	Pspc1	100	96.947	Mus_pahari
ENSCATG00000036434	PSPC1	100	96.947	MGP_SPRETEiJ_G0020232	Pspc1	100	96.947	Mus_spretus
ENSCATG00000036434	PSPC1	100	98.088	ENSMPUG00000013347	PSPC1	100	98.088	Mustela_putorius_furo
ENSCATG00000036434	PSPC1	100	96.008	ENSMLUG00000017663	PSPC1	100	96.008	Myotis_lucifugus
ENSCATG00000036434	PSPC1	100	96.941	ENSNGAG00000011271	Pspc1	100	96.941	Nannospalax_galili
ENSCATG00000036434	PSPC1	94	69.231	ENSNBRG00000014059	pspc1	76	69.207	Neolamprologus_brichardi
ENSCATG00000036434	PSPC1	100	99.044	ENSNLEG00000001294	PSPC1	100	99.044	Nomascus_leucogenys
ENSCATG00000036434	PSPC1	84	96.094	ENSMEUG00000000476	PSPC1	84	96.094	Notamacropus_eugenii
ENSCATG00000036434	PSPC1	100	85.660	ENSODEG00000007817	-	100	80.151	Octodon_degus
ENSCATG00000036434	PSPC1	99	88.553	ENSODEG00000019012	-	100	84.688	Octodon_degus
ENSCATG00000036434	PSPC1	90	79.630	ENSONIG00000012010	pspc1	87	68.644	Oreochromis_niloticus
ENSCATG00000036434	PSPC1	97	70.286	ENSOANG00000011381	-	99	63.740	Ornithorhynchus_anatinus
ENSCATG00000036434	PSPC1	76	97.494	ENSOANG00000009017	-	100	97.494	Ornithorhynchus_anatinus
ENSCATG00000036434	PSPC1	100	97.897	ENSOCUG00000006153	PSPC1	100	97.897	Oryctolagus_cuniculus
ENSCATG00000036434	PSPC1	90	79.012	ENSORLG00000004232	-	87	64.182	Oryzias_latipes
ENSCATG00000036434	PSPC1	92	76.877	ENSORLG00020000578	PSPC1	88	64.403	Oryzias_latipes_hni
ENSCATG00000036434	PSPC1	90	79.321	ENSORLG00015017480	pspc1	82	68.421	Oryzias_latipes_hsok
ENSCATG00000036434	PSPC1	58	82.857	ENSOMEG00000003779	pspc1	96	82.775	Oryzias_melastigma
ENSCATG00000036434	PSPC1	100	98.662	ENSOGAG00000012643	PSPC1	100	98.662	Otolemur_garnettii
ENSCATG00000036434	PSPC1	100	91.048	ENSOARG00000014163	PSPC1	100	91.048	Ovis_aries
ENSCATG00000036434	PSPC1	91	99.695	ENSPPAG00000009836	PSPC1	93	99.695	Pan_paniscus
ENSCATG00000036434	PSPC1	100	98.470	ENSPPRG00000008833	PSPC1	100	98.470	Panthera_pardus
ENSCATG00000036434	PSPC1	100	83.365	ENSPTIG00000016917	PSPC1	100	83.365	Panthera_tigris_altaica
ENSCATG00000036434	PSPC1	99	99.134	ENSPTRG00000005677	PSPC1	99	99.177	Pan_troglodytes
ENSCATG00000036434	PSPC1	100	99.809	ENSPANG00000001992	PSPC1	100	99.809	Papio_anubis
ENSCATG00000036434	PSPC1	92	82.883	ENSPKIG00000003578	pspc1	82	76.993	Paramormyrops_kingsleyae
ENSCATG00000036434	PSPC1	91	95.455	ENSPSIG00000005168	PSPC1	89	93.790	Pelodiscus_sinensis
ENSCATG00000036434	PSPC1	85	70.064	ENSPMGG00000015135	pspc1	80	73.611	Periophthalmus_magnuspinnatus
ENSCATG00000036434	PSPC1	100	97.323	ENSPEMG00000015214	Pspc1	100	97.323	Peromyscus_maniculatus_bairdii
ENSCATG00000036434	PSPC1	77	44.948	ENSPMAG00000004618	pspc1	79	47.692	Petromyzon_marinus
ENSCATG00000036434	PSPC1	99	96.935	ENSPCIG00000017680	PSPC1	100	96.935	Phascolarctos_cinereus
ENSCATG00000036434	PSPC1	96	73.961	ENSPFOG00000003362	pspc1	88	67.865	Poecilia_formosa
ENSCATG00000036434	PSPC1	96	73.961	ENSPLAG00000011540	pspc1	87	67.865	Poecilia_latipinna
ENSCATG00000036434	PSPC1	83	67.774	ENSPLAG00000004407	-	52	60.377	Poecilia_latipinna
ENSCATG00000036434	PSPC1	82	68.581	ENSPMEG00000001025	-	51	60.377	Poecilia_mexicana
ENSCATG00000036434	PSPC1	96	73.407	ENSPMEG00000008322	pspc1	87	67.442	Poecilia_mexicana
ENSCATG00000036434	PSPC1	96	73.130	ENSPREG00000007786	pspc1	87	67.442	Poecilia_reticulata
ENSCATG00000036434	PSPC1	100	98.662	ENSPPYG00000005186	PSPC1	100	98.662	Pongo_abelii
ENSCATG00000036434	PSPC1	69	100.000	ENSPCAG00000008314	-	66	100.000	Procavia_capensis
ENSCATG00000036434	PSPC1	98	97.734	ENSPCOG00000014364	PSPC1	100	94.073	Propithecus_coquereli
ENSCATG00000036434	PSPC1	97	97.714	ENSPVAG00000005036	PSPC1	100	93.117	Pteropus_vampyrus
ENSCATG00000036434	PSPC1	90	72.000	ENSPNYG00000008893	pspc1	87	58.672	Pundamilia_nyererei
ENSCATG00000036434	PSPC1	91	80.303	ENSPNAG00000016511	pspc1	90	71.698	Pygocentrus_nattereri
ENSCATG00000036434	PSPC1	100	97.132	ENSRNOG00000020782	Pspc1	100	97.132	Rattus_norvegicus
ENSCATG00000036434	PSPC1	100	98.898	ENSRBIG00000036057	PSPC1	100	99.179	Rhinopithecus_bieti
ENSCATG00000036434	PSPC1	100	99.235	ENSRROG00000036334	PSPC1	100	99.235	Rhinopithecus_roxellana
ENSCATG00000036434	PSPC1	74	98.134	ENSSBOG00000028172	PSPC1	88	98.134	Saimiri_boliviensis_boliviensis
ENSCATG00000036434	PSPC1	100	91.619	ENSSHAG00000004696	PSPC1	100	91.619	Sarcophilus_harrisii
ENSCATG00000036434	PSPC1	90	85.583	ENSSFOG00015001395	pspc1	90	78.372	Scleropages_formosus
ENSCATG00000036434	PSPC1	94	75.072	ENSSMAG00000001761	pspc1	82	76.970	Scophthalmus_maximus
ENSCATG00000036434	PSPC1	90	81.173	ENSSDUG00000010651	pspc1	76	73.953	Seriola_dumerili
ENSCATG00000036434	PSPC1	90	73.780	ENSSLDG00000004284	pspc1	81	61.806	Seriola_lalandi_dorsalis
ENSCATG00000036434	PSPC1	100	88.719	ENSSARG00000000888	PSPC1	100	88.910	Sorex_araneus
ENSCATG00000036434	PSPC1	97	81.020	ENSSPUG00000008550	PSPC1	89	80.851	Sphenodon_punctatus
ENSCATG00000036434	PSPC1	91	64.565	ENSSPUG00000001136	-	53	61.453	Sphenodon_punctatus
ENSCATG00000036434	PSPC1	94	78.171	ENSSPAG00000001921	pspc1	77	72.558	Stegastes_partitus
ENSCATG00000036434	PSPC1	100	96.756	ENSSSCG00000009569	PSPC1	100	96.756	Sus_scrofa
ENSCATG00000036434	PSPC1	91	96.364	ENSTGUG00000011295	PSPC1	100	94.647	Taeniopygia_guttata
ENSCATG00000036434	PSPC1	90	71.296	ENSTRUG00000011335	pspc1	77	66.180	Takifugu_rubripes
ENSCATG00000036434	PSPC1	90	73.148	ENSTNIG00000010358	pspc1	84	66.746	Tetraodon_nigroviridis
ENSCATG00000036434	PSPC1	92	88.253	ENSTBEG00000002361	PSPC1	100	75.717	Tupaia_belangeri
ENSCATG00000036434	PSPC1	100	96.558	ENSTTRG00000003343	PSPC1	100	96.558	Tursiops_truncatus
ENSCATG00000036434	PSPC1	87	99.048	ENSUAMG00000012309	PSPC1	100	98.575	Ursus_americanus
ENSCATG00000036434	PSPC1	97	98.857	ENSUMAG00000013993	PSPC1	100	98.563	Ursus_maritimus
ENSCATG00000036434	PSPC1	76	99.248	ENSVPAG00000010029	PSPC1	100	99.248	Vicugna_pacos
ENSCATG00000036434	PSPC1	100	98.470	ENSVVUG00000006414	PSPC1	100	98.705	Vulpes_vulpes
ENSCATG00000036434	PSPC1	96	73.184	ENSXCOG00000017438	pspc1	77	76.994	Xiphophorus_couchianus
ENSCATG00000036434	PSPC1	96	73.464	ENSXMAG00000007929	pspc1	77	77.301	Xiphophorus_maculatus